Array 1 259-651 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTFT01000538.1 Streptomyces albidoflavus strain 132 NODE_202_length_10137_cov_40.3584_ID_403, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 259 28 100.0 33 ............................ GACAACGCCGTCCTCGTCATCAACCGGCGCGAA 320 28 100.0 33 ............................ CGAGTAGCCGCCGTACTTCACGGCCACGTACAG 381 28 100.0 33 ............................ CGGGTGGTCGGCGATGAGCGGGGTGTCGCGGGT 442 28 100.0 33 ............................ GATGTTCGGCTACCTCAACGAGTCGATCGCCAC 503 28 92.9 33 ......T..........A.......... GGCCGGGTGGACCGGCCGCCTCGCCTGCGGCCG 564 27 96.4 33 .................-.......... GATCGTCGGGCGGTGGCTGGCGGCCACCGCGGC 624 28 85.7 0 ......A.............A.....GG | ========== ====== ====== ====== ============================ ================================= ================== 7 28 96.4 33 GTCGGCCCCGCGCCTGCGGGGGTTCTCC # Left flank : CCAACCCCCCCTACGAAGTCCGCATCACCGCCCGCCACCGCCAGTCCTTCCAGAAGAACGGACACGGAGCGCACGTCGTCTTCCACAGCGCAACCTTCGAAGGCCGCCTGCGCATCACCGACACCGACCGCTTCACCACCAGCCTCCTCACCGGCCTCGGCCCCTCCCGCGCCTACGGCTGCGGCCTGCTCACCCTCGCCCCACTGCCCGGACAGCAGACCTGAACCATGGCCGACATCTGGTGGAAAGCCGACCCGCG # Right flank : GGGTGTGACCGAGATACGCGCCAAAGGGGCAACGGGATGATCTTGAAGCCCTGATCCGCTCGGATCTACGTGCGGCGACGTGCAGCGGGGTCGCGTTCGGCGACGTGCCGAGCGACCGAGTCGACGCCGGGCCGTGCGTATCGCTCCAGGGAGCGGACGGAAGCGTGGCGGGAGCGGGCCAGCAGCATCGGGGTGGAGGTGCCGTCTTCTGCGTCGTGCGTGAGGGCACTGTGACGTAGCCGGTGAAGCGTCCAGCCGTCCAGATCCTCGATGTCGTCGGGTGAGGCGAGGGGGTTGGCCAGCAGCCGCGTGTTCTCCTCGAAGATCTCCTCAGCGCGGCGGTAGGAGAGCCTGGCCCGGTCGGTCTCCGGGCACACGTCGAGCGTCGGTGTTCCGGCCGGCGCCTTGCGGTCGGTGAGGAACAGCGGGCCGCGGGTGCGGCGGGCGATGAGGCGGGGCAGGAGCTGGGTGGTGCCGGACTGCCAGTGAATCCATTCGAT # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCCTGCGGGGGTTCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCCTGCGGGGGTTGCTC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2378-2894 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTFT01000308.1 Streptomyces albidoflavus strain 132 NODE_94_length_15750_cov_29.3359_ID_187, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2378 29 100.0 32 ............................. TGGGGAGAACTCCCCACCTCCCCAGCTGCCTC 2439 29 96.6 32 ............................A CGTTGGCAGGTGTAACAAGCCCAGCGGCGGCC 2500 29 100.0 32 ............................. CGCAGCGACGGACGCGGCCATGACCGCCACTC 2561 29 96.6 32 ............................G GCGAGGGGGCAAAAGTGTGACGCATGCGTCAC 2622 29 96.6 32 ............................G CCCCGGCCGCACCAGGGCTTGCCCCCACCGCC 2683 29 96.6 32 ............................G AAGATCCACGACCAGGGACGCGCGGTGAACGT 2744 29 93.1 32 ..T.........................G GCCAAGGCCGCATGGCTCATCGGCCGCATGGC 2805 29 100.0 32 ............................. GTCGGTGAGCTCCAGGTGCCAGCTGCCGGGGT 2866 29 93.1 0 .............C.......G....... | ========== ====== ====== ====== ============================= ================================ ================== 9 29 97.0 32 GTCGGCCCCGCACGCGCGGGGATGCTCCC # Left flank : CGGAGCTCCAGACACTGCCTGAGCAGATGCCCGATGTGGCGGCGCCGGCCCCGGACACCGAACGGCCCCCTCCCGTCCGGTGCGCTGGCTGGCCCGGACCTGGCTGGCGCTCTCTGATGCTGATGACCGGGCGCTGGCGCCTCTGCGGGTGCTGCCCGCTGCCTCACCCGCTCTGGCCGGCGCCGTCTCGGCCGCCGTACTGCAGATCCGCCCGGCCTGGTACCGGGGCCGCATCGCCTGCATGGAGATTTGGCTCGCCACGGTCCTCGCCCTTGCGCTCTGCGGCCGACGGGCCCACTGGGTACTGGGCGCACGGCAGTTGCCCACCAAGGCACATGCGTGAGTGTGGACCGAGGACGGCGCATTCGGGCTGTCCGGCCGCGACCGCCCGGACCCCGCCGCCTCTGGGTCGGGGCCCTTGCCGCACCTCCCGTGCCGAAAGGGTGACGTACATGAATGAAAATGAGGCATCCTCGCGGTGACCTCGCAGGTCAGCAAGT # Right flank : CCGCAACTGGATGCGCTTGCCCTCGAAGGGCGTTCGCCGCCCCCACGGCAAGGTTCTTCTCCCACCGACGACCGGAACAAGTTCTGGCGCGATCTCATCAAGGCCATGACGGAACAGGCCCGCAATCTCACTGCCGACACGCGGGCGTCGAAGACCCGGCCGACGCCCTGCCACTCTTCTCATTCGGTTGACGCGCCGACCAGACTGCCCACGCAAAGCTCTTGCCAAGAGAGGTAGAGGTCGTCGGCTGCGTCCTGAAGGCTGCAGACCTGCTTTTACTGTCGGCGACTGGGCCTCGACGGTCGACTGGTGCCGCCATCGAGGCCGTCTGTCATGCCGAAGGGACGTCCTTGAAGGTGTGGGTTCGATGCCACTGGTAGTAGGGCTCTCTGTTGGCGTTCCACCATGAGATGGTCCGGCCCTCCAGCTTCTCCCGGATGTACGTGGCGACTTCGGGGCTGTCTGCCGCCAGCGGACTCACGCGAAGAGCGCCGGCGGGA # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACGCGCGGGGATGCTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCACTCGCGGGGATGCTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 6623-7953 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTFT01000308.1 Streptomyces albidoflavus strain 132 NODE_94_length_15750_cov_29.3359_ID_187, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ========================================================= ================== 6623 28 96.4 33 .........A.................. CCTGGGTGGGCGCGGTGACGAGCTGGGCGCCCG 6684 28 96.4 32 ..........................A. GTGTCGCCGGGCTGGTACTGGCCCGTGTCGAT T [6709] 6745 28 100.0 33 ............................ GAGGGCCCGGACCCACCCCCGGTCCTCACCGAC 6806 28 100.0 33 ............................ CTCATCAGGGCGCTGGATGCGGCGGGGGGCACG 6867 28 100.0 33 ............................ GCCGCCTGGCCTCCCGGTGGGCGCGGACGGTTT 6928 28 100.0 33 ............................ GCTTGGTGGGCACCGACTGGGCGTCGGGCCGCT 6989 28 96.4 33 .................A.......... CCTTGAGCTGCCGCACCTGCATGGCGATCTCCT 7050 28 100.0 33 ............................ GGCGTCCTACGAGCTGGAGGCCGAGGGCTTCCT 7111 28 100.0 33 ............................ CGACGCTGCTGCCAACACCGCGGGCGACGTCTG 7172 28 100.0 33 ............................ CGACCGGTACTTGGGCGGCTGGCTGTACCTCAA 7233 28 100.0 34 ............................ GATCACATCGCCGGGGCGGCTCCGTGCCGGCGGG 7295 28 100.0 33 ............................ CCCGTGTGGTCCGCCGAACTCGCCGGCGCTGAC 7356 28 96.4 33 .............G.............. GAACATCGCGGTAGTCGTGATCGCGATCCGGAA 7417 28 100.0 33 ............................ TGCCGTCGTCGTGGCGTCGCCGCGGTCGGACCC 7478 28 92.9 33 ...........G.T.............. GAGGCTGGTGTTCCGGCGGCCGGTCCAGGAGTC 7539 28 92.9 33 ............TG.............. GCGACCACCACGGCCAGGCCGTTCGCCTCTACC 7600 28 96.4 33 .............G.............. GACCGCATCGGGCCAGTGGCAGCACCGCTACGT 7661 28 96.4 33 .............G.............. GAGCTGATGGACGCCCTTCAAGGGCTGCTCGCC 7722 28 96.4 33 ...........T................ CTTCCAGACGCCGAGCCACTCGTCGCCCCAGGC 7783 28 96.4 30 .............G.............. GGGACCGGGGTGCTTCTGGGGGTACCGCGT 7841 28 100.0 57 ............................ CCAGCGGCGGGCGGCGAAGAAGGCCAGCCGCAGGTGCCGGAACTTGATCTCCCAGGG 7926 28 85.7 0 ....................C.A..G.T | ========== ====== ====== ====== ============================ ========================================================= ================== 22 28 97.4 34 GTCGGCCCCGCACCCGCGGGGATGCTCC # Left flank : CCTGCTGCCGGAAGTCCTTGTGCACTGGGACAGTGCCGGCAGACAACAGACTTGGGCCCGCCCCTGGAACTCTTCGAGCAACGAGTCAGACATTGACCATCCCGACGTGCCCGCCCGGCCGTTCTGGGCGACCGACGAAGGAGGCCACGACCAAGTCGGCTGCGTGTACACGGCCCAAGGCATGGAGTACGCCTACAACGTCGTCATCATCGGCGGGGACCTAGTGCGCCGTGGCGACCGCTGGGAAGCCCGGCCTGACGCCAGCGAGGACACCACACTCAAAAGCTTGGCGCCGGACCAGTACCTCCGGTACGCGCTCAACACCTACCGCGTCCTCGCAACCAGAGGCACCCGCGGGACCCGCTTCTATTCCACTGACGCCCCCACACAGAAATACCTGCGGAAATTGCTGCCATGTCATAAGCCTTGACTGCTTGGATGGCCGGGCCTCGACCTCGCATTCCGAGAGGCCGTTACGTACCTTGCGATATCGCTTATTC # Right flank : TGCAACAGGGCTCTGGGTGGGTACGCAGTCAGACGTGCGGCTGGTCATCTGTCGCCCCGCTGCCCACCGCGCCGGTAGCCTTAAGTGGGCAGGTGCGGTGGGCGGCGGCGGTCTCCGGGCTGCACGGGCTGCCGCACCGGTCGCAGACCCCGCGCACCTCCTGCGGGCAGCAGGGGCAGGTGCAGCGGTTTCGGACAGCGGGCACGCTGTAGCCACCGATGTACCAGTCGGTGTTGCCGCAGCAGAAGCCGCATTCGCCGATGCGGCACGGTGCGCACAGGCCGCTCACGACCGGGCCTCCGCGCAGGCAGGGCAGGCGCGCGGGAACCACGAAGCCCACGGGCACTGCGGGTCCGGGCGCATGCCGAGGTCCACGGCCGTGGCGGTGTCGAGTCGCCCGGCGCACCACACGCACTCGGTGCCCCGGAGCTGCCGCTCGCCGAGCGCGGTCGGCTGCGGTAACTCCTGCGTTGTCGTCGCCATGGTCATCCCCTGCTGTC # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:-0.03, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCCGCGGGGATGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCACCCGCGGGGATGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 10716-11047 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTFT01000308.1 Streptomyces albidoflavus strain 132 NODE_94_length_15750_cov_29.3359_ID_187, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 10716 28 100.0 33 ............................ GATGGAGCGGGCCGCGCTGATCGCGGCCGGGGC 10777 28 96.4 33 ........................T... TGACCCCCTCATGAGTCTCGTCTTTGATGGGCT 10838 28 96.4 33 .......A.................... CTCGACGTCGCCCTCGCCGTCCACGTCGGTGCG 10899 28 96.4 33 A........................... GCACCGGTACGCGACGCCCGAGGCCGCCCGTCT 10960 28 89.3 33 A....................G.....T GGGCGGCACCATCTCCATCCGCCTCGACGCCAT 11021 27 78.6 0 ...............AT..AA..-...G | ========== ====== ====== ====== ============================ ================================= ================== 6 28 92.9 33 GTCGGCCCCGCACCCGCGGGGATGCTCC # Left flank : CCGAGCTGCGCGGCATGGGAGTGAGCGTGCTGTACGGGGAGGGCGGGTTCCAGCCGAATCCACCCGGCGAGGGCCGCGAGTTCCCATGGCGCCTCGCCCTCGACGAGGTCGAGCGCGCTGTCGGCGCGGGGCGCTAGCCTGCCCCCATGTCCTCCCTGCCTGCGGCCCGGCCGCGTCCTGCGTCGGTGGTGAACGCGGAGATCCGCGCGCTGATGCTGCGCTCGGGCGGCCGCCTGGCTGCCGGAGATAGGGCCCGGTACGTGGCGCTGATCGCGGAGTGGGCGGAAGCGGTCCGCGATGCCGTCCGACCTGCGGCGTAGTATCCGGCCGTGGACATCCCCGACACCTTGATCGACCTCCAGCGCGCCGCCGACGCGGAGTGGGCGCGCCTCGCCGAGCTGACCGACAACGACGAGCGGGCAGCAGGGGCGCGCGTGGTACGACGCTGGCGCCCGGGCCCAGGCCGCCGTCACCGAGTGGGCGCGTGAGGCCGCGCGGCA # Right flank : GCTCGCCACGGTCATCGCCCTGGCACTCTGCGGCCGGCGGGCCCACCGGGTGCTGGGCGCACGGCAGTTGCCCACCAAGGCACATGCGTGGGTGTGGACCGAGAACGGCGCATTCGGGCTGTCCGGCCGCGACCGCCCGGCCCCCGCCGCCCCTGGGTCGGCGCCCTCGCCGCACCTCCCGTACCGAAAGGGTGACGCACATGAATGAAAATGAGGCACCCTCGCGGTAACCTCCCAGGTCAGCAAGTGTCGGCCCCGCACGCGCGGGGATGCTCCTCCGTTCGAGTCCGTGCTGCGGGACGGGGTGCGGTCGGCCCCGCACGCGCGGGGATGCTCCGCCTTCGGTGTCGAACGGGTCGTCAGAGGTCGAGTCGGCCCCGCACGCGCGGGGATGCTCCGCGGCTGATCAGCTCCAGCTCAACACCGGGCTTGTCAGCCCCGCACGCGCGGGGATGCTCCGGCGACGACGGTCCCAGGTCCGTAGCCCCGCCCGTCGGCCC # Questionable array : NO Score: 3.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCCGCGGGGATGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCACCCGCGGGGATGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [16.7-20.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 11295-12780 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTFT01000308.1 Streptomyces albidoflavus strain 132 NODE_94_length_15750_cov_29.3359_ID_187, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================================================================== ================== 11295 29 96.6 32 ............................T CCGTTCGAGTCCGTGCTGCGGGACGGGGTGCG 11356 29 100.0 32 ............................. CCTTCGGTGTCGAACGGGTCGTCAGAGGTCGA 11417 29 100.0 32 ............................. CGGCTGATCAGCTCCAGCTCAACACCGGGCTT 11478 29 96.6 32 ...A......................... GCGACGACGGTCCCAGGTCCGTAGCCCCGCCC 11539 29 100.0 32 ............................. CGCTGGGATGACGGTGACACGTCGTTCGCCAC 11600 29 100.0 32 ............................. CTGATCGGGGTACTCGTAGCCGAGGGCCACGG 11661 29 100.0 32 ............................. CGGGCGTTGCCGTCCACGCGGCCGTCGTTCGG 11722 29 100.0 33 ............................. CGCCAGGCCACCCGCGACGCGAACGCGACGGCG 11784 29 100.0 32 ............................. CCGTTACGAACCTGCGAAGTTCCAAGAGGGTC 11845 29 100.0 32 ............................. GCGGCGAGGGCGGCGGCCGAATCCATCTCCGC 11906 29 96.6 32 ............................T CACCGACGGGCAGACCTCCTATTACTCGGAGG 11967 29 100.0 32 ............................. CGTCCGGCCGGGGGGTCCAGCTCTGCGAGTCG 12028 29 96.6 32 ............................C CACTTGGGCGCAGTCCGGTACCTACCTGGAAG 12089 29 96.6 32 ............................C TTGTCCATGTCCCACATAGCGCCCTTGGCGCT 12150 29 100.0 32 ............................. CCCCTCGCCCACGCCTACCGCACCGGCGCCCG 12211 29 96.6 32 ............................T CCCCACGTCGGGCGGCGTGTGAGAACAGCTGC 12272 29 96.6 31 ............................C GCCAGGTGGCCACCCAGTCGCCCGGCAGCCG C [12296] 12333 29 89.7 32 ..........T..C...A........... GAGTTCGCCGCGCGGGTCGGGTTCGGCCGACT 12394 29 96.6 32 .............C............... ACCGCACTCGCCCGGTTCTCCACCCTGCTGAC 12455 29 93.1 32 .............C..............C AGGCCGTCCCTGACCGAGGACCCTCTCTCTGA 12516 29 89.7 86 .............C..T...........C GGCGGTCGGTTCACAACGGGAACGGACTGGGTGTCGGCCACGGGGGATGCTCCGGCGTAGGCCAGGACCACCGGGCCCCGGTCCTT 12631 29 93.1 32 .C...........C............... CACCGGTACGCGACGCCCGAGGCCGCCCGTCT 12692 29 86.2 32 A............C.......G.....T. GGCGGCACCATCTCCATCCGCCTCGACGCCAT 12753 28 72.4 0 .............C.AT..AA..-...GC | ========== ====== ====== ====== ============================= ====================================================================================== ================== 24 29 95.7 34 GTCGGCCCCGCACGCGCGGGGATGCTCCG # Left flank : GGGATGTTCCTGACCCCCTCATGAGTCTCGTCTTTGATGGGCTGTCGGCCACGCACCCGCGGGGATGCTCCCTCGACGTCGCCCTCGCCGTCCACGTCGGTGCGATCGGCCCCGCACCCGCGGGGATGCTCCGCACCGGTACGCGACGCCCGAGGCCGCCCGTCTATCGGCCCCGCACCCGCGGGGGTGCTCTGGGCGGCACCATCTCCATCCGCCTCGACGCCATGTCGGCCCCGCACCCATGGAAATCTCGCTCGCCACGGTCATCGCCCTGGCACTCTGCGGCCGGCGGGCCCACCGGGTGCTGGGCGCACGGCAGTTGCCCACCAAGGCACATGCGTGGGTGTGGACCGAGAACGGCGCATTCGGGCTGTCCGGCCGCGACCGCCCGGCCCCCGCCGCCCCTGGGTCGGCGCCCTCGCCGCACCTCCCGTACCGAAAGGGTGACGCACATGAATGAAAATGAGGCACCCTCGCGGTAACCTCCCAGGTCAGCAAGT # Right flank : CTCGCCACGGTCATCGCCCTGGCACTCTGCGGCCGGCGGGCCCACCGGGTGCTGGGCGCACGGCAGTTGCCCATCAAGGCACATGCGTGGGTGTGGACCGAGAACGGCGCATTCGGGCTGTCCGGCCGCGACCGCCCGGCCCCCGCCGCCCCTGGGTCGGCGCCCTCGCCGCACCTCCCGTACCGCACGCCCGAAAGGGTGAACTGTAAGGCGTCATGTTGACGCCCTCGGGGGTTGATCTGCAGATCTGCACGACACCGCAGGCAATCCCCGTGCGGCGGCGCCACGGCCCGCCGTACACCGGAGGAGTGACAACACCCACCCCGCCCGTCGTCCCCGTCATGCGCCTGGCCGACGAGAGCCGCCCCACCACCGGGATAGGCCAAACCGCCCGGCGGATGCCCGCCGTCCTGGCCCGCACCGCCCGCCTCGCCTGGCGCGCCGACCGCCCAGCCGTGGTCGGCATGGTCGTCGCACAGGTCACGGCCGCCGCCCTCGCG # Questionable array : NO Score: 5.49 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:-0.16, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACGCGCGGGGATGCTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCACTCGCGGGGATGCTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1143-2271 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTFT01000825.1 Streptomyces albidoflavus strain 132 NODE_656_length_2795_cov_17_ID_1311, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 1143 28 100.0 33 ............................ GAGGCGGCCGTCGCGCTGTACCGCGAGGTGAAG 1204 28 100.0 33 ............................ GTCGCGGTGCTTCTCCCCGCCGGCCTTGTGCGG 1265 28 100.0 33 ............................ TCTCGCGCCGGTAGCACGGCGAGATGGAGACGT 1326 28 100.0 33 ............................ GTGCCTGTGATGGTTCGCCCCGCCCGGCCCGAG 1387 28 100.0 33 ............................ CAGCAAACGCCCCGCCCAGGGACACCCGGGCGG 1448 28 100.0 33 ............................ CACCGCCTTGTGCGTGCCGAAGTAGCGGCCCTG 1509 28 100.0 33 ............................ CCACGGGGGCAGGAACTGAACCCCAACGGGGTG 1570 28 100.0 33 ............................ CTTCGTGCTGTCGTGGATCACGCCGAGGTTGAC 1631 28 100.0 33 ............................ CGCGCCGCAGCGTGGGGCTACGACAGAGAGCGA 1692 28 100.0 33 ............................ GTCCTCGTCCAGCTCGTGGTCGGGCCGCAGACC 1753 28 100.0 33 ............................ TCCGGTGAGGGTCGCCCTCCAGCGGTGGACCCG 1814 28 100.0 33 ............................ CTGAGCAGGAACTCAGGTTGCCGCCGCTGCCTC 1875 28 100.0 33 ............................ CGCTCTGACCTGCGTGACAGAGCGCGTCACACC 1936 28 100.0 33 ............................ TACGTACTCGACCCGCGCACGTTGTGACTCCAT 1997 28 100.0 33 ............................ GGGCACCCTCGCCCTGGTCGCCGCGTCCGCCCT 2058 28 100.0 33 ............................ CTCCGTGCGGGTCCCGTTCTCGGCGACGTCGCA 2119 28 100.0 35 ............................ TTTCGTGCCCGGGGGGGGTAGCGCCCGGTGGTGAT 2182 28 100.0 33 ............................ GGGTCTGTGGTCCCTCACTCCCGCCCAGTACGC 2243 28 96.4 0 .............G.............. | G [2260] ========== ====== ====== ====== ============================ =================================== ================== 19 28 99.8 33 GTCGGCCCCGCACCCGCGGGGATGCTCC # Left flank : AATGCAGGCGTTGCCTTACCAAGATCGTGGACAGCGCATAGCCACGCAAACAACCTGCGGCCCTGACCCGGACCACCGGACACCTCGTCCAGCAGGCCCCGTGTCGAAGGGGCAAGGAAGCTGTCCCACAGCCGCTCAGCCACAGCCGCCGTATCAAGCAGGTGCGACAGAAGAAGATTCGTCTGCCCGCCGGCACGCTCCGCCGACTTCCCCCACAAGACCCCTAACGGACCTTCCACTGACTCCAGCGGCACCCCTGCATCCGGCACGCCGGACCACCCTTCGCTCAGCACTTATGACTGCCCGGCACAGTAGAGGACACCACTGACAATTGACGGCGGACGGCCCAAAGACGAACATCCCCCACGGCGGGCGCCCGCACCACGCGGTCACACACCGCGCTCCCTGAACTCCACCACTCGCTGCCCGGCCACGAACGAAGGGCGACGCACATGAATGAAAATGAGGCACTCTCGCGGTAACCTCCCAGGTCAGCAAGT # Right flank : CGTGCGCGCTGGCGACCCCCCGCCCGCCGGGACGTAGGCCGCCGATCAAGAGCCCGGAGACCGGATTCGCCCAAGGTCCGTGGTGTCGGACGGCGTCCGGGGGCGGTCTCAGGGGAGCATGGGGACGTGCTGAAACCTCCGATCGCGCCGATGCGCGCCGAGGCACGGGCCTCGCTTCCTGCGGCGGGCGCGCCGGCTGGCATGTTCTGGCAGCAGAAGCTCGACGGATACCGGGTCATCGCCTTCCTCCGCGGCGGCCGTCTGCACTTTCAGTCCCGCTCGGGGGCTGACCTCACCGAGCACTTTCCCGAGCTCCAGGCTGCCGCTGGCATCGGCATGGACCTGGTCCTCGACGGCGAACTGGTCGTGCTCCAAGGGGGGAGGCTGGACTTCACGCGGTGCAGCAGCGGGCCCGGCTGGAGGGCTTTCGCGCCCGCTCGGCCAGCCGGTCGATGCCGGCGCATGTCGTCGCCTTCGACCTGCTGGAGGCCGACGGAGAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCCGCGGGGATGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCACCCGCGGGGATGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //