Array 1 13717-15147 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPZD01000056.1 Cronobacter malonaticus strain 685 contig056, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 13717 29 100.0 32 ............................. CGTTTTACCTCATCGGCAGGCATGAGGAGCTC 13778 29 100.0 32 ............................. CGGTGCGCGCCTACTCTGGCCGCACCGACAAT 13839 29 100.0 32 ............................. TTCCGCACGATCAGCGGTACGCCACTTTATTT 13900 29 100.0 32 ............................. TTTATTTCTCGCCAGGTGGCGTGTGTGAACTC 13961 29 100.0 32 ............................. CGCCCGCTTTTTTAATTGTCTGCGAGCGTATA 14022 29 100.0 32 ............................. CTGTGACTTCTTGCTTTTTGCTGAATTTCGCA 14083 29 100.0 32 ............................. TCAAAAATTGTAGACGGTGTGTTCGTTCCGCG 14144 29 100.0 32 ............................. GAGTACGGCGGCGGGTGGTGGCTGGGGAGGGC 14205 29 100.0 32 ............................. GCTTGCAAACTGGCTGGGAGGTGGTTGTTTCT 14266 29 100.0 32 ............................. TTACATGAATCACTCGCCATTGAAACACTGAT 14327 29 100.0 32 ............................. GGCGCTTTGACTGCATAGCGCGGCCCTGGCTA 14388 29 100.0 32 ............................. AAATTGCGAAACGCTTGCGGGTCAGCGTAGGC 14449 29 100.0 32 ............................. ACCACCTATAAAAACATCACTGAGAAAGCCGT 14510 29 100.0 32 ............................. CGTTTGACAATCCAGATTGGCGCTGCGACGCT 14571 29 100.0 32 ............................. TACCGTCAGAGTTTCCTCTCCGCGGATCTTTT 14632 29 100.0 33 ............................. TGGTAAACGACTTTATGCAGATCAGGCACGACT 14694 29 100.0 32 ............................. TAGCAGCTCCCGGCGTCGTGCTCCAATTTTTT 14755 29 100.0 32 ............................. ATTTGGCCGGAACACTACTCTGCTGTTTGTGC 14816 29 100.0 32 ............................. CCTACCTATTGACCAAAACGATCCAACAAACT 14877 29 96.6 32 ...................T......... GCAATCGACGGGCTTAAAGAGGTGCAGGAGTC 14938 29 100.0 32 ............................. ACGGTGGACAGGGTTAGGGGCGATAAAATATT 14999 29 100.0 32 ............................. AAAATAACCGAAGGGTTTTTTAAAAGCGGTTC 15060 29 93.1 32 ..A.........T................ TCGTAGTACGCCTTAACGGTTTCGGCGCGGAT 15121 27 82.8 0 ...........-.-...C.TA........ | ========== ====== ====== ====== ============================= ================================= ================== 24 29 98.9 32 CTGTTCCCCGCGCGAGCGGGGATAAACCG # Left flank : ACGAAAGCTTCAAATGGATGATGGCGAACAACATCGCGTTTATCGTCGCCAACATCAATATCAACTACCGGCGGCCCGCCGTGCTTGGCGATCTGCTGACTGTCACCAGCCATGTCAAACAGCTTAACGGTAAAAGCGGAGTGTTAAGCCAGGTCATTACGCTGGAGCCGGAAGGCGAGGTGGTCGCCGATGCGCTTATCACTTTTGTGTGTATCGATCTGAAAACACAAAAAGCCTTACCGATTGAAGGCGAACTGCGCGAAAAGCTGGAAAAAATCACAGGGTAAATTCTGCAAAAGTGGCGCTTGTGCCGACAATCATGGACTTATCACCGCTCAGGGTGAACAATCCGGTAGATGTTAACAGCCCACAAGCGTCGCGAAAAAACGCCTTCAAAATCAACAGGGCAGCCGTTCTTTAACAAGATGGGTTGTTAAGAAAATGTTGGTAGGATGTGGGTGGCGAAAAAATCGCAATAAGTACAAGTGCTTAACGTTAGT # Right flank : GCCCAGGTTCTTCGCGCCTGGCACTCGCCGCCCCATTTCCCGCCACATTCTTCAGCAACGTTTATACTTCAAAGCCCTTGTTAAATTTTGAACACTGCGCAACGAAGGAGAGGTTATGCGAGTACACCATCTCAACTGCGGTTGTATGTGTCCTTTGGGCGGTGCGCTGTACGATGGCTTCAGTAAAGGGCTGCACGCGCATCTCATCTGCCACTGCCTGCTGATTGAAACCGACCATCACGGACTGGTGCTGGTGGATACCGGCTTTGGCTGTGACGATATGCGCCATCCGGGCCGCCATTTACCGCTCTTTTTCCGGGCGCTGAACAATATCCAGTACCGGGAATCATTAACGGCGCTGCACCATATTAACGCGCTCGGCTTTAAGCCGGAGGATGTACGGCACATTGTACTCACGCATCTGGATTTCGATCACGCTGGCGGGCTGAGCGATTTCCCGCAGGCGCAGGTGCATCTGATGCAGCGGGAAATGACCGCCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGCGAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCGCGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //