Array 1 4073-7341 **** Predicted by CRISPRDetect 2.4 *** >NZ_WUWI01000024.1 Vibrio paracholerae strain EDC-690 EDC-690_contig24, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4073 28 100.0 32 ............................ AAGAAGATGGAGCGAAGCTACATAAAAGCCTT 4133 28 100.0 32 ............................ TTGAAATGGCAAAGGCGGCAGAGGGTCAATTT 4193 28 100.0 32 ............................ TAGCTGCGGATCTCAACACAGTCCGAGCTTTG 4253 28 100.0 32 ............................ TATTTGCGGGAAAGAATACAAGCAAAGAAGCT 4313 28 100.0 32 ............................ TATGGGGTGATCGATATGTCTGGGGAAACACA 4373 28 100.0 32 ............................ TGAACCCGCAAGGCATACAGGACGCATTCAAA 4433 28 100.0 32 ............................ GATGGCGGCGTGGTGGGCATGGCCCCAGCGTT 4493 28 100.0 32 ............................ ACAAGTGGAAAACTGGGCTCATCACAACAAGA 4553 28 100.0 32 ............................ TTGAGTGAAACTCCCGGTGTTCATCACCATGT 4613 28 100.0 32 ............................ TTAACAAAGCAGCCAAAAAACAACGCGATGAG 4673 28 100.0 32 ............................ GCGCCGCAACCTCAAGTTGAAGTGAAACCACT 4733 28 100.0 32 ............................ AATACCCGTTGCAACTTCAGGCACTGGCGCTT 4793 28 100.0 32 ............................ ATCGCGATAATGGTTGCGGCACTTGCTGCGAT 4853 28 100.0 32 ............................ AAACCTTGATGTGCCATTGGTTGACGTTACTA 4913 28 100.0 32 ............................ AAAGTACATAATCAGCAACCGCCTGATCGACC 4973 28 100.0 32 ............................ ATTGAATTGTTGTGCTTGTGCATGATTTACTT 5033 28 100.0 32 ............................ ACAACAATGTCAGCGGCAATTCAGCACACAGA 5093 28 100.0 32 ............................ AAGATCAACGTTTCCAATCGCTGAATCTCTTC 5153 28 100.0 32 ............................ TTCAATATTTCGGGTTTTCTTGAAGGCTCTTT 5213 28 100.0 32 ............................ AAGGCGTCAAACTTTCAGAAGGTGAACGAAAC 5273 28 100.0 32 ............................ AAATCAACGGCACGGGGTGCACCAAACTTTTT 5333 28 100.0 32 ............................ ACCATGTCAGCGGCAATTCAGCATACAGACGC 5393 28 100.0 32 ............................ GCAGCCTCTGTCACACCAGATAGCACGTAAAC 5453 28 100.0 33 ............................ GAACGGTTGCCATCGGCTTTAGCCAGTAGCTTA 5514 28 100.0 32 ............................ TACAGGATTATTTAATCAAATTTATCAACGAT 5574 28 100.0 32 ............................ TGCTGCTTTCGCTGCTGCTTCTCGATTACCGC 5634 28 100.0 32 ............................ TGAACATGGCCTCAACCGAAGCCGTAGTTTCT 5694 28 100.0 32 ............................ AACTGGTTCCTTGCTATTCCTTTCCAACTAAG 5754 28 100.0 32 ............................ CCTTGGTGGTCGCCCAACCAGTTAAGGCGGTT 5814 28 100.0 32 ............................ GTGAAGAGCAGCTCGGCGAACTGAAAGACCCA 5874 28 100.0 32 ............................ AACCGCACGGCGGTGATAGGCAAAATATTTTC 5934 28 100.0 32 ............................ GCTTGGGGTTGTTATGATCGCATCCGGTCGAT 5994 28 100.0 32 ............................ CACAAGGCGTGTTTAACCGTGCGGTTAAATCG 6054 28 100.0 32 ............................ GGTAGTTACGACATCAGGGATATTATCACACG 6114 28 100.0 32 ............................ TTACGCCTTAACGAACGCGTCAACGCGTAACG 6174 28 100.0 32 ............................ ACCCAACAGACCGCCGCCTAACTCAAGAAGTC 6234 28 96.4 32 C........................... TTGGGCGCTAGACCTTAACTCTTCCCCTTGGT 6294 28 100.0 32 ............................ GAAAGCGCCAGTAATTTGCCTGCTGTGTTTCG 6354 28 100.0 32 ............................ GGTAACGATTGAAGTTCCAGGAGACAGCTCGC 6414 28 100.0 32 ............................ AAATGGGCGGGCAGCGTTTGGCTTGTAGTCCT 6474 28 100.0 32 ............................ ATCAGAAACTGTTGTTCCTGCTGTGGCGACTA 6534 28 100.0 32 ............................ TTGGTCTAACTTTTCGATTTGCGGACACTCAG 6594 28 100.0 32 ............................ GTCGAATGATTAATCCCGGCTGTTTTACTCCG 6654 28 100.0 32 ............................ ATACATACTTATCATTGTCGTTGCGAAAAGAG 6714 28 100.0 32 ............................ TTCAGCTTATTGTAGATGCGCAGCAGCCTGCG 6774 28 100.0 32 ............................ TCATATTCATCAAAATGCGCTATTGTGCAGCG 6834 28 100.0 32 ............................ ATCTCCGTAGCAACTTCGGGATCGCACGTTCC 6894 28 100.0 32 ............................ TTGATTCCCTCGTATTCACTTTCGGTTATACC 6954 28 100.0 32 ............................ GTATTGAAAGCGGAATGGCTACTCTGACAGCT 7014 28 96.4 32 ...........T................ TGGCATAAGGTGAGGTAATTTTCCAAGTGATT 7074 28 96.4 32 ...........T................ TGAACGGATACGCTCGTTGTTTCAGTATTTAC 7134 28 96.4 32 ...........T................ TTCCCAGCCCACAGCGAGCTCGCAAATCATTG 7194 28 96.4 32 ...........T................ AAGGGTTTAGACTTGGTATCAGTGTATAAATC 7254 28 96.4 32 ...........T................ AGCTTAAACAGTACGTTTTTGCCTTTGACGTT 7314 28 92.9 0 .........................TT. | ========== ====== ====== ====== ============================ ================================= ================== 55 28 99.5 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GATGTAACTTACGTCAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAGCGGGATATGCAGCAAAAAGCCGAACTATGGGCTGCAAAATCCGGCAAACCGCTGGTGGAGTGTTTAGTGGATTTGCAACAAAGCAAGCCGACAGCGTTGTGCACCTTGCCCTTTATTTACTTGCATAGCCAGCAAACCAAGCTGCGAACCCCAGAAAAAAACAGCAAGTTCCCGCTGTTTATTCAGATGCAGCAGCAAAGCACATCACAAGATGGGAGCTTTGATTGCTATGGTTTGAGTAGCAAAGCGAATGGGCAGTCAATGTTGGCGACCGTACCGCACTTTTAAATTGAACGAAAAAGGGTAATTTTTACCCTTTATTTTTGCTCTTTAAAAATGTGCTGTTAAAACAAATAGTTGCAACGGGTTGTTTTTAACAAGGTAAAAAGAAGATTTTTATCCTAACATCCTGTTGCAGCTTATTTTTATCGGTTTATTCTATT # Right flank : AGAAAGTAAATCAAACGAGGCAGTTCACTTTCTAGATTACGTTAAGGTTCTTACGTTCTGCTATGCATGTTTATTAGGGTTTTCTTAAATGGTCTTTTCCCCAAGCATTAGTGACAAATTTCCGAGGTGTAATGATTAAGATAGCCCAGTTGATGAGTATCAGTTGAGGGGTAGTCACCATGAGCATCGTTGGTTGTGTTAATATCAAATCCAAGTATATCGATCGAACATGTCAGATGGTCTCGTAAGCCAAGTTTTACTCAGGGCTAGTTTTGCGTCAATAAAAATCCTTTTAAAATCATAACGTAATGAGCTATTGGATTACATCAGCTTCCATGTCTTAAGTGGAGGTTATATTCTAGATTATTTTCAATTGCCGAGTACCAGTCACAGATAGGCTACCTTTGGCGGCCTCTTCTATATGCCCGCTCCACCAGCACATCATTGGTTTTCTACGTTCGAGATAATCCGTGCGGTTATAGGCACTTCGAACTTGGTTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //