Array 1 75313-77026 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAGM010000015.1 Bacillus altitudinis strain MRS-251-APC-3A Contig_15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================================================================================================================== ================== 75313 32 100.0 32 ................................ TTGTATGTTAGATAAGTTTATTTCTTTATCAT 75377 32 100.0 34 ................................ TGTAATATTTTTGCTTTTTCCAAAACAGCCAGTA 75443 32 100.0 35 ................................ TGCTTTGAACGGAGAGAAAACCCACAGCACCTATT 75510 32 100.0 33 ................................ ACAAGACATTGCAAACAAGCTCAATGTCTCCAG 75575 32 100.0 35 ................................ AAATAAATCTTTGTCACAAACTCAAAACGAGTCAA 75642 32 100.0 35 ................................ AGCAAAAAGCTGGGTGACAGGTGATGCTATAAAAG 75709 32 100.0 33 ................................ AATGCCTATAACGTTTCATGATTCATCAAAAAT 75774 32 100.0 35 ................................ AACATACGCAAGATGAAATTTTTTCAACCTTACAA 75841 32 100.0 34 ................................ GACTCGCGCTTTGCCATGACGACATTGCCCTCTA 75907 32 100.0 35 ................................ ATTTTGTTTGTCGCTCATACCATTACCTCCTGATA 75974 32 100.0 35 ................................ TCAGAAGAGACATGCTCCCCTGATGACGTTTCAAC 76041 32 100.0 33 ................................ CGCTATCTCCAATCCTTGTAATGCACCATAGAT 76106 32 100.0 33 ................................ CTAAATCCACTGAGACAGCAGGCTTATCGAACC 76171 32 100.0 33 ................................ ATCCAAACACCGTCACCGGATGTGTTTGAAATC 76236 32 100.0 33 ................................ TATTATGAATACTCTTGTCAGGCAGAAGCTTAA 76301 32 100.0 37 ................................ TTGACGCTCATCTTGCTGACGGTGTAAAGCATGTGAC 76370 32 100.0 34 ................................ TACCCGGACAAAGGCGCCAAGAATAACGGTATCG 76436 32 96.9 34 .......................A........ AAAACATAGTTTTTAGCAACTCGTTTCGCATTAG 76502 32 96.9 34 ............G................... AAAAAAGATGTACCACGGATGCCATGAATATCGG 76568 32 90.6 130 ...........T.......T.......A.... TACCTTTTCATTCGACAAAAATGAGAAAAAATGTATATTTTTCGGGGGTGAAAACTTAATTCCTATATAGAAATTTAAGGGTTTTGACGATCATTCCCTAAAAAATGTTATAATTAGGGCGGAAATCGCA T [76597] 76731 32 96.9 34 .............A.................. AGAAAAAGAAAAGTGTGATGAAAAAGAATATCCA 76797 32 96.9 35 .............A.................. TCGCGATGTTGAGGGAGACGCGGTCTACGGCAAAT 76864 32 96.9 33 ........T....................... ATTTCAAGAACTTTTGTAATGGCTCTCAAAAAA 76929 32 96.9 33 ...........T.................... ACAGTACCACCGCCTTTTAGATAACGCATTACA 76994 32 90.6 0 ...................T..A....A.... | T [77023] ========== ====== ====== ====== ================================ ================================================================================================================================== ================== 25 32 98.5 38 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : ATGAAGGAAATAGCCGACCGGCTGGGCGAATCAAGACAAAACATCTCAAACATCCACAAAAAAGCGCTCAACAAACTAAAAGAAGAAACAGGGGGAAATGTCCGTGAACGAAGACAAAATGACCAATGGAGAAATGGAAGAACTCATTGAAACCTTCACACCCATGATCAAAAAGAAACTACAAAACACGGCATATCAAGAAAGAGAAGACCTCGAACAAGAACTCTATATCAAACTCATCGAAAAAGTAGACTGGCTGATTTACCAAGAGGGACCTGGCTTTTGGGAGTTTATTGTGGAATATATGACGAAGATGTAAGAGGAACTGATGGTGCGAATGTCAGGTGAACATAAAATCCCCGGGACATTCGCACCTTTTTATTCGACAAAATTGGGTAAAAATGTATATTTCATGAAGGAGAAAACAAAATTCTTTATTGAAAGTTGAGGATTTTACCTATCATTTCCTAAAAAATGTTACAATTAGGGCAGAAATCGCA # Right flank : TTGTGAAAAACATAACTCTGCCTCTCAGTAGTCATGTATTTAATTAAATTCAAAGTTGTTGCTGAAATAATAAATATGATTATCAAGATTCAAATAGATTTCAGACTAGAAAAATTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCGTTTCATTCGACAAAAATGAGACAAAATGTATATTTTTTAGGAGTGAAAACAAAGTTCTATATAGAAACTTAAGGGTTTTGACGATCATTTCCTAAAAAATGTTATAATTAGGGCGAAAATCGCAGTCGCACTCTACATGAGTGCGTGGATTGAAATAAAAATAATTGGCCGTTCTCCCAAATGAGTACAAGTCGCACTCTACATGAGTGCGTGGATTGAAATACGGTTAGGGTTTTCGGTTAAAAATATTCGTCCGTCGCACTCTACATGAGTGCGTGGATTGAAATCGTTCATCCCACATCGGCGACACCTCCGGTTAAATGTCGCACTCTACATG # Questionable array : NO Score: 8.83 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:-0.35, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 77313-77739 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAGM010000015.1 Bacillus altitudinis strain MRS-251-APC-3A Contig_15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 77313 32 100.0 34 ................................ AAAAATAATTGGCCGTTCTCCCAAATGAGTACAA 77379 32 100.0 33 ................................ ACGGTTAGGGTTTTCGGTTAAAAATATTCGTCC 77444 32 100.0 35 ................................ CGTTCATCCCACATCGGCGACACCTCCGGTTAAAT 77511 32 100.0 34 ................................ ACTTTGATCACTCCATGTGATATAATTAAGATTC 77577 32 96.9 33 .............A.................. TCTGAATAGACCTTTTTCAATTCAACGGATTTA 77642 32 100.0 34 ................................ AGCGATGACAAGGCTCTCAAGCACATTGTATTTT 77708 32 75.0 0 ..........C.....A...A.A...CAC.G. | ========== ====== ====== ====== ================================ =================================== ================== 7 32 96.0 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : GTGCGTGGATTGAAATTCGCGATGTTGAGGGAGACGCGGTCTACGGCAAATGTCGCACTTTACATGAGTGCGTGGATTGAAATATTTCAAGAACTTTTGTAATGGCTCTCAAAAAAGTCGCACTCTATATGAGTGCGTGGATTGAAATACAGTACCACCGCCTTTTAGATAACGCATTACAGTCGCACTCTACATGAGTGTGTAGATTAATAATTGTGAAAAACATAACTCTGCCTCTCAGTAGTCATGTATTTAATTAAATTCAAAGTTGTTGCTGAAATAATAAATATGATTATCAAGATTCAAATAGATTTCAGACTAGAAAAATTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCGTTTCATTCGACAAAAATGAGACAAAATGTATATTTTTTAGGAGTGAAAACAAAGTTCTATATAGAAACTTAAGGGTTTTGACGATCATTTCCTAAAAAATGTTATAATTAGGGCGAAAATCGCA # Right flank : TTTCTGCGTTTTATACAAATTCAAGTACTATCCAGTTCAAAATCTACACATATGAATAATTCAAGCCCTACACAACAAAAAAAGACTCGCTCACACAGAGCCGAGTCTTAATTTTTTTTGCAGTTTTTCTTCACTGAAAATCCAGCCGGTATAGGAATTTTTGATTTGGTGGTCCATGTCGATATGGCAGATTGCAACAAAAGGATAGTGACCTTTGCTGCGGTAGCGCAAATCAATGAACCGTACCTCATAATGATCCTTGTATTTATCTACTTCCCACCGGTAGACAGGGGAGAAGGAGAGAAAGGCTGAAATGTTTTCATCCTGTTTGGCAATTTTCATAATCTCAGTATCAGGGACCGGCACACGGTTAAAGGTGTCTAAAATGATAATCTCACCATTCATACTGCGTCCAACATGGAAAGAGGATTTACATTTCACAGCAATACGCCATTGTCTAAACTTCATTGTAGGCGAAATGATTATTTCCTCAATCTCAT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //