Array 1 18057-17248 **** Predicted by CRISPRDetect 2.4 *** >NZ_LEEE01000022.1 Enterobacter hormaechei subsp. steigerwaltii strain GN02346 contig22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 18056 28 100.0 32 ............................ ATTTTCCGGAAGGGGAATAAAATTCTTCTTTT 17996 28 100.0 32 ............................ ATAAGCCTCCTGCTGGGGCTGGCGTTGCCGGT 17936 28 100.0 33 ............................ GGTGATGTGAGACAGAAATGGGACACACAAAGC 17875 28 100.0 32 ............................ GGTATATTCAGCCTCCCCCGTCACCACTTCAA 17815 28 100.0 32 ............................ GTCACCAGATTCCGATGACCAGACGATAATCG 17755 28 100.0 32 ............................ TGGCTCGCCAGCTCGATGGCCTCAAAAGCAAA 17695 28 100.0 32 ............................ GATGAGCTCGGTTCTATTCCGTATTCGTCAAT 17635 28 100.0 32 ............................ CCAATGAACAGCGCAAAGGGCCTGAGCACTGT 17575 28 100.0 32 ............................ TCGACGAAAAGAGGGGTCTACGCGACCCCCAA 17515 28 100.0 32 ............................ TTCGTCGTGCAGCTGGCGCATCTCGCTCTCAA 17455 28 100.0 32 ............................ TGTACCGGCACCAGACCGCTGTTTAGCAGAAC 17395 28 96.4 32 ..................T......... CTGCGCGCGAAGTTTCATTTAAGATGCAAATT 17335 28 100.0 32 ............................ AAGTCGGCCTGTCCTCCTGCTCCGTAACGCCA 17275 28 89.3 0 ..........TA.G.............. | ========== ====== ====== ====== ============================ ================================= ================== 14 28 99.0 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AACGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTGATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCAATCAACCGCATGCCTCTACTTGCAGGTAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGGCCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGGATGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTCAGGGGGTATGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGGGAGTTGACCCTGATTTTTGCCCAGAATGTAATGTATTGATTTTTCGGTTAAATATCCTGGAGCGCAAAAAAGGGTTTGAGCAGGGATTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGGTATTATTTCA # Right flank : TCATCGAGTGTAAGGCTGTGTGATTTTATTGTGCGCACCACCGTACAACCAACACAAAACCCGAAACAAAACCCAACCAATCGTTCAAATAATCGACTGTACTAACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGCTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 28461-27530 **** Predicted by CRISPRDetect 2.4 *** >NZ_LEEE01000022.1 Enterobacter hormaechei subsp. steigerwaltii strain GN02346 contig22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 28460 28 96.4 33 ............A............... ATGATTAGTCAGATTGAATGACAATGCCTTAAA 28399 28 96.4 32 ............A............... GCAAACCCCAAATCAGTTTCGAGCACCCTGCC 28339 28 96.4 32 ............A............... TGCAAGCTGTCGTAATGCGCCAGCGCTACGGG 28279 28 96.4 32 ............A............... AGCGCATCAACCGACAATAGCCAGGTAACGGA 28219 28 96.4 32 ............A............... CCCGCAAACCTCCGACAAAAACGCTTCAAGAT 28159 28 100.0 32 ............................ TACTTTGACAACGTCGAAGACCAGGTCAGAAA 28099 28 100.0 32 ............................ TGACGCAATGCCGACACACCCGCGTGGCACAG 28039 28 100.0 33 ............................ TGGCGGCGAAGCGGCAGCAAAGGAACTTCTTAA 27978 28 100.0 32 ............................ AGCAATCAGCAAGAAAAAATATTGGCATTGAT 27918 28 100.0 32 ............................ TTCAAGCGCAAAGACCATTGCGCCCGTCTCGT 27858 28 100.0 33 ............................ GGAAAAAGTAGCTGCCGCACAGCAAAAAGCCAC 27797 28 100.0 32 ............................ TTCACCAGCTACGGACTACGTTGAGCGCCAGC 27737 28 100.0 32 ............................ ATGGCGATACGGTTGTTAGCGTCTCGGGTGTT 27677 28 100.0 32 ............................ ACATTAAGCCCGCTCAATATGAGGCGGAAATA 27617 28 92.9 32 ............A........G...... ATTTGTCTTGCTGGATGTTAGTTACTGAGCAC 27557 28 78.6 0 ......C..............A..CTCC | ========== ====== ====== ====== ============================ ================================= ================== 16 28 97.1 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : TTCCGCAAACGCAGCCCGTTTGCCGTTGTCTCGGTGCTTATCTGGACGTAGTCAAAACCGAACTCGCAGAATCAATGAGTGATTTCCGGGTGGTTGAATTTGACGACGAGACGGAACGGCTGAAGGAAAAAGAGTGGCTTCTGGAGGATACCGAAACCAAATGCGATTACTGCCGGGCATTGAACCACGTGCTGCTGGTGTCGCATTTTGACCGCGAGATGCTGCCCCACCTGACAGGATTGCTGCATGACATTACACATTCGATGGCGGCAGATGTGGCTGCACCTGAATGTGGAAAGCCTGTAGTTCATATCATTAATTAAGTTTAGTCTCGTGCGTCGGGGAAGGGACTCCGGCGGGGTATGGCGAAACCCTTTTTTCGAGTAGTTCTTTAAGTTATTGATTTTTATTGTGCGAATAAAGGCCGCAGAAAAAAGGGTTTGAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA # Right flank : CCAAACATTCACTCCAACTATTTTAAAATCCACAATTATCACCACAATCCTCGTTGTATTTTTAATAAGCTCAATACTCATTCATCCGACAACCATATTCCCTCATATATATTATTCATAAAAATAATACATTAAATATGTCAGAGATTTTTTATCTCGACACTCCGATAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTTATCTCCGCTAACATACCCCGCATTCAACACATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCCCATCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTGGAGAAATGTCGTATTCAGGTAAATGGTGGACGCGTTGAATATGTCACTCAGGAAGGTAAAGAGTCTTTTTACTGGAATATTCCCATCGCTAATACGACGGCGGTAATGTTGGGAATGGGAACATCCGTTACGCAAATGGCGATGCGGGAGTTCGCGCGAGCG # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //