Array 1 120852-118244 **** Predicted by CRISPRDetect 2.4 *** >NZ_JSDW01000005.1 Bifidobacterium bifidum strain IPLA 20015 Contig05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 120851 36 100.0 30 .................................... CATGGCGACTTGCACGTTCACCGTACAATA 120785 36 100.0 30 .................................... GTGCCGCCCGAGAAACGTTTGGAGGTTATC 120719 36 100.0 30 .................................... CTTGTATATTAGTCGTCTCCGTATCGTAAA 120653 36 100.0 30 .................................... CTAAATCTCCGATGTGCATACGCATACGTT 120587 36 100.0 30 .................................... AAGCCACTTGAAACGTGACAATGCTATATT 120521 36 100.0 30 .................................... CATTGCAACGTCGTAATATTGACGCATACC 120455 36 100.0 30 .................................... CCGAGGCCGCATCACCGGCACAAAAGCAGC 120389 36 100.0 30 .................................... TGCCGCTACATCATTGTTTTCCTCACGATA 120323 36 100.0 30 .................................... TGCAGGGTGGTGGAAAACTCACATTGCAAC 120257 36 100.0 30 .................................... GATACCAATCAGTAGACACAAGCAATGCCA 120191 36 100.0 30 .................................... CCACGATTGCCTTTCCACATACAAAACCCG 120125 36 100.0 30 .................................... CGGATATCCTCTGATCGCGCAAGACTCCTC 120059 36 100.0 30 .................................... AGCCAGCGAGCGCCCCGCCACGGTAAAATA 119993 36 100.0 30 .................................... TGCCGAACACATGGAGTTGTGGAACAAGGC 119927 36 100.0 30 .................................... CATATCCGCGTATGTGTTGGTGGTGTTGCT 119861 36 100.0 30 .................................... GAATGTCGGTCACATTCAGCGCGTTGTACT 119795 36 100.0 30 .................................... TTGTAACACCCGCCGCGAATCGATCACGTA 119729 36 100.0 30 .................................... TCTCAATTTTTTTGCAACATCGCGTGTATT 119663 36 100.0 30 .................................... TGGGTTGATCGTTGGGTGAAACGTGTGCAT 119597 36 100.0 29 .................................... ATGATATCGCAGATTCTGAGTGAGTCGTT 119532 36 100.0 30 .................................... CGCCGTGAGCAACCTCACAGGCGAGACCAT 119466 36 100.0 30 .................................... CTATGACGTGCGGGTGATAGACCCCGGCTT 119400 36 100.0 30 .................................... CTCATACCCCCATACGGGTAGGATATTCGT 119334 36 100.0 30 .................................... TGCTGATGGACGTATCGGCGGTGACCTGCA 119268 36 100.0 30 .................................... GCCCGAAAGCCCGGAACAAGCCATCTCAGG 119202 36 100.0 30 .................................... CTGCTCGGCTCCCGTTACGGTGAGGTGATG 119136 36 100.0 30 .................................... CAAGGAGTACACAATGGAGATCATCACGCC 119070 36 100.0 30 .................................... TGCGCAGATCGTCGTAACCAAAGCGACCGA 119004 36 100.0 30 .................................... GACAGCGTATCACCAGATCGTACCACGTAC 118938 36 100.0 30 .................................... ATGTGACCTGCGTGGCCACCTCCTGAGAAT 118872 36 100.0 30 .................................... TCTCCTGACTGCGCTCGACAGGTTGAACAG 118806 36 100.0 30 .................................... GCGGATGTCGCCAATTCCAATTCGATGTGG 118740 36 100.0 30 .................................... GTGGACAGTGCGGTGAGCGCCTTGGTGGTG 118674 36 100.0 30 .................................... CGTCGGCACCTACTACGTCACATGCCCGTA 118608 36 100.0 30 .................................... TTCGCTCTCCTTCCTTGAAGGATGCTTCGA 118542 36 100.0 30 .................................... CCAACAGTTCGATTTCAAGGGCGACCAAGT 118476 36 100.0 29 .................................... CATCCCCCCCCCCCACGAAAGGAACAACA 118411 36 100.0 30 .................................... AAACTCACGCCGCTTAACTTGGCCTGCTGG 118345 36 100.0 30 .................................... TCATGTCTAACTATATTCGTGGTTAGATAT 118279 36 97.2 0 ...................................A | ========== ====== ====== ====== ==================================== ============================== ================== 40 36 99.9 30 GTTTCAGATGCCTGTCAGATCAATGACTTTGACCAC # Left flank : ATTGCGCGGATGAAGTGGATTATAATGCTTTGTTCCAGAAGCTTGCTGTCAAGAAAATAATCGAAGGATTTACGCCGGAGCAAATCAGTAGATTATTGTCTTTGCAGGCTGAGTTAAAAACAATTATTCAAGATGAGATATGGGGTCAAAATCTACCTCTGACTATTCCCTGCGATTTGGATTTGAAAGCAGCAATTGCAATGGCCAAACCTCGGATTGACACGAGTTCTTTGGGATCCTTGTATGATAAAATTTCGACGGCAGTAGATACTGCCGGTGCTCTTGCCGAGAGCAGGATGCTGGTGACGCTTCATACAACTCAATACTGTGATAACGACCAATTACTTTATCTGCACCGTACTTTATTGCGGTACCAGTTGCAGCTTCTTGACCTGGAATGCTGCAGCAAGAAAGTCATGCTGACAGAGGGGATGAGCCACTATGTCGATGAGGATTACGTTCAGTTCTCATGAACTGTTCAGGAATCCTTAAGGCTATCG # Right flank : GTGATGCGCAATAGTGTTAGGGGCACCTCTGTTGCTGTCTTCTGGATAGCTTCCGGGGTGTGCTTTTGATTCTGGTGACATATGGGAAACGATTGATGCACAATATTCGGACTGTTATAGTGACATCCTATGTGAAGAGCGCTGTCGTTGGCGGCCTCAGGCCGATGCCCAAGGAATAAGTGGAGCGCATACCGCAAATGACCAGCCATCAGGAAGTCCCTGATGGCTTTTTTCATGCTTCAAGGTGTGTAAGCCTGTTTGACAGTGTCTGTTGTGGCTTGATTTTTCCGTTCAGTGGAGGTTTTGGGAGGTAGTGCCCGAAAGGTTGCGCACTTTGGATCATGCCCGCCCATGGCGCGATGACCGGTTCGCTTCCTGCAGATTGTCACCGAGCCGGGACATGTCGAGGTAACGCCGGTTGGACCATTCGTTCGCGGTGACGTACCTGATGCGCGCACAGACGAGCATGAGCGCGCCGTTCCCGTCCGGGAAGCTTCCCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGATGCCTGTCAGATCAATGACTTTGACCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.10,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //