Array 1 179482-174208 **** Predicted by CRISPRDetect 2.4 *** >NZ_JODY01000015.1 Streptomyces catenulae strain NRRL B-2342 contig15.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 179481 28 100.0 33 ............................ CTGGTTCCCCAGGTTGATGGCGGCCCGCTTCAA 179420 28 100.0 33 ............................ CCACGTCATGTGCGAGAGGTGCGGCTGGACCTT 179359 28 100.0 33 ............................ CGGCCAGGCGCTGCTGTGCTCGAACTGCGAGAG 179298 28 100.0 33 ............................ CATGCGCTCCTGCGCGGACGCGGTGGAGGCCAG 179237 28 100.0 33 ............................ CTCCCGGATCCCGGGAGAGTGGGTCTCCCGCTG 179176 28 100.0 33 ............................ CGACCGGGCGTCCTTCGTCTACTGGGCCACCGC 179115 28 100.0 33 ............................ CGACTGATGCCCGCACCAATCGGTGCGGGCATC 179054 28 100.0 33 ............................ CCACTCCTGCGGAGGGAGGTCCCAGCCGACGTG 178993 28 100.0 33 ............................ CGCCGTTACGGATTTCGTTGACCTGCGGTTGTC 178932 28 100.0 33 ............................ CTCAACCTCGCCCGCGACGCGGCGTCCGGCGCC 178871 28 100.0 33 ............................ CAACAGCAACAACGGGGGCGCCGGCGGGGGTCG 178810 28 100.0 33 ............................ CTACGGACATGCAGGTCAGCGGCCTGCGAGGAA 178749 28 100.0 33 ............................ CAGCAACGCCCCGGCCGGGCCTCATCGCCAGAG 178688 28 100.0 33 ............................ CGCCCCGACCGGGGGGCAGCGTCCCCCGGCCCC 178627 28 100.0 33 ............................ CGCCGCGGGCGTACTGCGCCCACATCTTCGGCT 178566 28 100.0 33 ............................ CTCAATTTCAAATCCGCGCAGCGGATTTGAATG 178505 28 100.0 33 ............................ CTCCGGCCCGCCGTGGGAGCTTTCGTCCCCTGC 178444 28 100.0 33 ............................ CTTCCGCACGGCCGACGGCATCGAGGAGTTCCG 178383 28 100.0 33 ............................ CCGCACCACCCCCGGCACCACTCCGGCCCCGAC 178322 28 100.0 33 ............................ CAGCCGGCGTGTGCGGGTACTGGTGACTCACGT 178261 28 100.0 33 ............................ CGGCTACGCCGTCTGGCTCAGCCAGAAGTACAG 178200 28 100.0 33 ............................ CGACTACCGCTCCCGGCGCGGGCAGGGCCCGGA 178139 28 100.0 33 ............................ CGACGTGGCCAGTCGCTCGGCGGTCTCCGCGTC 178078 28 100.0 33 ............................ CCCGCCTGGACGCCTGCGGACGGCCGATGTACG 178017 28 100.0 33 ............................ CGGGGCGAGCGCCTGCCGACCGTCCGACGTCAG 177956 28 100.0 33 ............................ CAGGTCCATGACCTCTCAACGACGGTGACGGTC 177895 28 100.0 33 ............................ CAGGTCAAGGCGATCGAGATCCAGACCCGCAAG 177834 28 100.0 33 ............................ CATGCCGGCGCCGCCCAGCAGCTCCGCGAACCG 177773 28 100.0 33 ............................ CCATGGACACCACCGTCATGGCGACCGCCGGAC 177712 28 100.0 33 ............................ CGGTGGGGTGCCGGGCACCTTCACCGAGAAGTA 177651 28 100.0 33 ............................ CCTGGTGGCCGTGCCCTACGTGCTGGAGGTCGA 177590 28 100.0 33 ............................ CACCACCGTCACCGTGGAGCCGCTGGACGGCGA 177529 28 100.0 33 ............................ CTCGCCCTGCACCTGGCGGATGCGGCTGCTGGC 177468 28 100.0 33 ............................ CATCATCACGAGCAAGGGCCGGGACGCGACGCA 177407 28 100.0 33 ............................ CAGCCTGTGAGCGCGTCCGCCGCCAAGAAGAAC 177346 28 100.0 33 ............................ CGGGGGTAACAAGGTGTGACGTGGGGTTACGAG 177285 28 100.0 33 ............................ CCAAAGAGGGAAAGGCGTACGCGCTCGAACTGC 177224 28 100.0 33 ............................ CTCAACCAGGTTCTGCGTCACCTTCACCTGTCC 177163 28 100.0 33 ............................ CAGCTCCTCGCCGAGGCGCAGAAGGTGACGGCC 177102 28 100.0 33 ............................ CCACTTCACCCGCACCGGCGCCGCCGTCTTCGA 177041 28 100.0 33 ............................ CACAGCACGATGCACAAGTGGTTGTACCAATGC 176980 28 100.0 33 ............................ CTCCAACTTCCAGGCGCACCGGATGCGCTGCGG 176919 28 100.0 33 ............................ CACCTACCGGAACCTGAAGAAGTTCGCGGAAGA 176858 28 100.0 33 ............................ CGTGATCCCGCTCGCCGAACTGCGCGACGGCCG 176797 28 100.0 33 ............................ CATGGCCGCGCTCATCCTGATGTCCTGCACTTC 176736 28 100.0 33 ............................ TGTTTTGTGCGGTTTGAGGCTGAATCATCGTCA 176675 28 100.0 33 ............................ CGGTGTCCGGGGCGGCGTCCGGAGCCGGGGCGG 176614 28 100.0 33 ............................ CGGGCCACGAGCAGCACACGATCGCCGAGTACC 176553 28 100.0 33 ............................ CCGGCGCCGGGCAGTCACGACCGGGCCCGTCCG 176492 28 100.0 33 ............................ CGGTGCCGCGGTCGCGCTGCACGGCGGCCGGCA 176431 28 100.0 33 ............................ CTTGTGCGAGCCGTGCGCCGAGCAGCGCACCTG 176370 28 100.0 33 ............................ CGCCGATCACGAAGAGGATCGGCATGACGCCGT 176309 28 100.0 33 ............................ CCTCGACACCTACCGCGCCGCCGCCACCGACCG 176248 28 100.0 33 ............................ CGACGGCCTCGATCGCGGCCGTTCGGGCTTCGT 176187 28 100.0 33 ............................ TCGTCCGCGTACTTCAACGCCTCGAGGAGAAGG 176126 28 100.0 33 ............................ CGCCGGGACGCGACTGGCCACCCGCCTCGAGGC 176065 28 100.0 34 ............................ CAAGGTAGGGGAGGTTGTCCAGCGCGGTCTCGGC 176003 28 96.4 33 ..............T............. CGTCCTTGTTGGTGCGGGCGCCGTCGCGCACCG 175942 28 92.9 33 ...........G..T............. CAAGCCGGTTTACCTGGTGCTACCGCCCACTGT 175881 28 92.9 34 ...........G..T............. CTGGCGATGTGGGGCGGGCACGGGCTGCTCGTCC 175819 28 92.9 33 ...........G..T............. CGGCTCGGCTTGACGACCGAGCTAAGGCCCGAA 175758 28 92.9 33 ...........G..T............. CGTCGAGGGCCTTCGACGCCAGATGTTCGACTG 175697 28 92.9 33 ...........G..T............. CCCCGGCACCGACAACAACCCCGACAACCCCAC 175636 28 92.9 33 ...........G..T............. CCCGGGTGGCGGGTGGAGTTCCAGCGGGTCTAC 175575 28 92.9 33 ...........G..T............. CCCCTACACCGGAGCGGCCTCCAGCGCCTCCCG 175514 28 92.9 33 ...........G..T............. CCTCGCCATCACCCCCGCCGCCCAGCACCTGGC 175453 28 92.9 33 ...........G..T............. CGACTCCCGCCGGACCTCGACCACCCACGGGTC 175392 28 92.9 33 ...........G..T............. CAGAAACGAACGCTTAGCCGCCTGGATGAGCGA 175331 28 92.9 33 ...........G..T............. CTGCGGCAGCGCGATCCCCCGGGACAAGCCCGC 175270 28 89.3 33 ...........G..T..A.......... CGAGGCGATCTGGGCGGTGCGCTTCAGTCGGAT 175209 28 92.9 33 ...........G..T............. CGCACAGACCAACGGGTCATTTTCCGGCAGCTA 175148 28 92.9 33 ...........G..T............. CTGCGACTGTCCCCCCGCCCACCCACCAGTCAA 175087 28 92.9 33 ...........G..T............. CTTGCGGAGGCGTCCCGCCACACGGGAAGCGCG 175026 28 100.0 33 ............................ CCAGTGCCATCCTCAAAACCATGCACTGAAGGT 174965 28 100.0 33 ............................ CGGGCGTGGAGACTGACCCTGCCGGGGTCAGTT 174904 28 100.0 33 ............................ CATACGAGCCGCCAGCGGGCTTCAGAGCTGGTG 174843 28 100.0 33 ............................ CGATCACGGTGACGAACCCCGACCCGTGCCGTC 174782 28 100.0 33 ............................ CGTGAGGTCGCGCGCCTGGATGAGGTCCGGGCC 174721 28 100.0 33 ............................ CGGTGCAGGCCCTGCTGCGCAAGGTGACACCGG 174660 28 100.0 33 ............................ CACGACGCGGGCCCGCGACTCGCGGAGCGGGCT 174599 28 100.0 33 ............................ CTGACGCAGCCACCACCGGTAGGTCGAGCCGTC 174538 28 100.0 33 ............................ CTTCGGGCTCTCCACCCTCGTGGGCAAACCGCT 174477 28 100.0 33 ............................ CGTCTCAGCGGGGGCGCCGAGGAGGCGCGCCAG 174416 28 100.0 33 ............................ CAGGCCGATCAGGTCGGCGGGGTCCTCGTAGAG 174355 27 92.9 33 ..........G...-............. CGTCTGATTTATTCATGCGAGCGGTTCGCCGTC 174295 28 100.0 33 ............................ CGCGTGGCTAAGGCGGCAGCGGTGACAGAGGCT 174234 27 85.7 0 ...A......A...-..T.......... | ========== ====== ====== ====== ============================ ================================== ================== 87 28 98.4 33 CCGCTCCCCGCACCCGCGGGGATGAGCC # Left flank : ATCACCTTCTTCAGGCTGGAGCAAGGCATCCAAGCGCCGCCGCTTCGGCAACCGGGCGCCGTAGCGTTGTCATCAACGGGTCGGCCTTTCGGGCATGTTTGCGCGGATTGCCCGTACTGATAGGGCTTCTGCGATTGAGGTTCACTACGTCGCGACTCCGGCGAGTCCGCATTCAGGTGCTGGCGTCTTGTACGCGGAGGCCTTCTGATCCTGGCGAATGCTGGGTCGTGGTGAGAACCGGCCGTGCCTTCCTTCCCACGATTCGTTGCGAACCGCGGGACGCACAGGCGGTCTCGGGTCCGGCTCGGTAATAGGGGAGCCGGGCCTCACGGGATGTCTTTGGGGCTTTGTCGGTCTCACTCGAGGGGCCTGGCGTGAGCGCGTAGCCTGTGGCGTGGAGACATCTCTGACCGAACGGGTTCCCGTTTATTCCGTATGTCCTTTTCTCTCATCCTTGCTGAAACAAGCGTCGCCCCTTGATAAAAGCGCAGCTCACGAAG # Right flank : CGCGTGGGCCGGGCGCAGTCGAGCCAGCCACTTCCTGCCCTGCCTTGTGACGTCTGATGGACACCAGAATGATGGCAACGCTCCTTATGCCCGGGCCACTTGAAGTGGCCGGTAACGCCGGGCCGCATCGGTCACTTCCAGCCGCGGTTGGAAGTCACGTTCCCCCAGCCGGTGCGTTGACCGAGTACAGCCGCGCCAGCCGTGCCGCCTCGTCCTCCCGGAACGTGGCAACTTCCTGGCATCGCTGGCTCATGACGAATTCGCCGAGTGGTAGGCAGAGGTCCATGCGTTGGATGCAGACGCCGACCATGAAGGGGCCGTTGGTGGCGCGGTACATGCGGATGCCGTAGTAGCCCTCCTGGCAGTCGTCGGGGTTGTTGAAGCGGCAGTCGGTGCAGGTTGCGGGGAGGCGTACGGGGCGGATGCTCTTGGCGTAGAGGGTCCGGCCGTCCGGCAGGCGGTAGCGGACCCGTTGGTCCGAGGCCCCGGCTGTGATGATC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGCTCCCCGCACCCGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCTCGCGGGGATGAGCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 75959-76292 **** Predicted by CRISPRDetect 2.4 *** >NZ_JODY01000029.1 Streptomyces catenulae strain NRRL B-2342 contig29.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 75959 28 100.0 33 ............................ CAACACCAGCGACGGGGAGGGCATCTCCTGGGC 76020 28 100.0 33 ............................ CCGCGAAACCCGCGAGCGGCCCGGCGCAGCGAA 76081 28 100.0 33 ............................ TGACCCGACGATTAGGCCGGGCCCAGCGACGGA 76142 28 100.0 33 ............................ GGCCACCGCCGTGGTGCTGGAGGAGGTCGCGCA 76203 28 100.0 33 ............................ CCCGCGGTACAGCCCCGGCGAGCTGTAACCCTC 76264 28 96.4 0 ............A............... | T [76278] ========== ====== ====== ====== ============================ ================================= ================== 6 28 99.4 33 GTCGGCCCCGCGGATGCGGGGATGTTCC # Left flank : AGCTGTCGGCCGACGCCCTGTCCCCGGAGCGCGGGATGCACCCCGACGAAGTGGATGTACGCGTCGCTCTCGTTCTCCGGTGCGTGAAAGCCCACCAGGAACGCCCGCACCCGCCCCTCGCCTCCGGCCTCGCCCGCGTCCCCCGGGGAGCCCGGACGACCGGGCTCCTCCAGGATCAGGCTCGTCCGGGAGAAGAACTGGAGGAAGAGGCGCGGCAGCAGGAGGGAGAGTTCGCGGGCCTCTTCCGGGGTGCGGGAGTCGCCCCACCAGTTCCGTACGCAGTGGACGAGCGTGGGGTGATCGGTGACATGGGCCGGACGCAGTGCGAGCACGGCATTCCCCTCCAGGAGCTGGCTTTCGGTGGACTGTGGTGCCATCGGTGCTGCTCAGCGCGGGTGCGGCCGCGCCGGTGGACCGGCCCGACGGTTCGTTCCCAGCCAGAGCGGTGGAACTACCACTCCCCCACGCCCCCTCTCGACTAACGTCGCAGGTCGGCAAGT # Right flank : CCGACCGGCACACCGACCTCTGCCGCACGTCGGTGTCGCCCCCCCGTAGGACCCGCCCCCGCCGGTCAGTGCCGGTGTGGCCCCCGCCGGTGTACCGGGCCGTGGGAGTCCTCGCAGTGGCCGGGTGCCGCTGCCTCGGGGGTGGGGCCGGAGCCGACGTGCAGGACGGTGTCGGCGTCCCGTTCTCCGACGTGGTCGACCTGGAGCGTGGCGTGGGTGATGCCGTATTCGGTGATCAGGAGGTCCTGGAGGCGGCGGCGGACCTTGTGGCAGTCGCCGGAGGGGGCGACCAGGATGTGGGCGGAGAGGGCGGGTTCGCCGGAGGTGATCTGCCACAGGTGCAGGTCGTGGACCTCGGCGACCTCGTCCGCCGCGACGAGGTGGTCGCCGAGCGCGTCCGGGTCGACGCCCGCGGGCGCCGCCTCCAGGAAGATCCGCCCGGACTCGCGCACCAGCCCGTACCCGGCGCGCAGCATCAGCGCGACGACGACGAGCGTGGC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGGATGCGGGGATGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [35.0-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 36960-36504 **** Predicted by CRISPRDetect 2.4 *** >NZ_JODY01000037.1 Streptomyces catenulae strain NRRL B-2342 contig37.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================================================ ================== 36959 29 100.0 32 ............................. CGAGGTGGTGACGCCCATGTCCCGCAGCCCGT 36898 29 100.0 33 ............................. CGCGGCGATGTCGCGGTTGTTGTGCAGGAGGTA 36836 29 96.6 32 ...............T............. TACCATCGGCGATATTTTTACCAGCACGCTGT 36775 29 93.1 32 A..............T............. TACCGCATCATTTCTCTGGGCGCAGGTGTCCA 36714 29 96.6 32 ...............T............. CGCCAGGTAGACGATGCGGGCGTCCGGCATGC 36653 29 96.6 92 ..........................C.. CATCCAGCCGGTGAAGGCGGTGGTGAGCTCCCAGCGTCCCCGCCGCCCGCGGGGATGCCCCGATTGCTCCCTCGGCGACCACTCAGGCGCCG 36532 28 75.9 0 TC.CG.......-............CC.. | G [36516] ========== ====== ====== ====== ============================= ============================================================================================ ================== 7 29 94.1 42 GGTGAGCCCCGCAGGAGCGGGGATGGACC # Left flank : CGAAGGCGCACGCCACGTCGTACATCGAGGGCCTGACGATCCTCGCCAACATGCGCCTGTGCGCCAACATGCCGGCCCAGCACGCCGTCGCCACCGCCCTCGGCGGCCGCCAGTCCATCAACGACCTGGTCCTCCCCGGCGGCCGCCTCCTCGAACAACGCGACACCGCCTACGACCTGCTGACCCAGATCCCCGGCGTCACCTGCGTCAAACCCAAGGGCGCCCTCTACGCCTTCCCCCGCCTCGACCCCAAGCTCTACAAGATCACCGACGACCGCGAACTGGTCCTGGATCTGCTCCGCGCGGAGAAGATCATGATCGTCCACGGCACGGGGTTCAATCACCCGACGCCGGATCATTTCCGGTTGGTGACCTTGCCCAATAAGGATGATCTAACGGAGGCTGTTACTCGGATCGGGAACTTCTTGGAGGGGTACGGGAAGGGGTGAGAGTTGGCTCTCCGGGCAGGCGGGATGGGTAGAAAACCCCAGTTCGAGGAG # Right flank : CTGGGTCCCGTATTCGTTCAGCGTATCGGCGAGGCGCCCCGCACTCGCGGGGACAACGGCGGGAGGGGCGGCACCGCCTACCGCCCTCCCCTACCGCACCACCACCATCCCGCACCCATACGCCCGCCCATGCCCAACCCCGCTGGTCAGGACCCCCACGAACGTCTCCGGATCCGTCACCGTCAGCTTGCCGCGGATTTCGGCGCGGGTGAGGCGGAGGCCCTTGTGGGGGGCGGGGCTGGAGATGCGGGGGAGCATGCGGATGCCCAGAGTGTCCGGGTCGGCGTCGGCGCCGAGGCGAGTGAGACCGTCCGGGGCGACAGGTGGTTCGCCGAGTGGCTGGAGGCGGCGGATGAACCACTTCTTCACGTGGTCGGGCCGGGTGTGGGCGACCCGTACGCCCCGGGTCTTCGGCGGCGCGTCGGGTGGCGGCGGCTTGCTGTAGACGGGGTTCACCACGGTGCGGAAGCCGACCGTCTCCCCGATACCGAACGTCCGGT # Questionable array : NO Score: 2.80 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTGAGCCCCGCAGGAGCGGGGATGGACC # Alternate repeat : GGTGAGCCCCGCAGGTGCGGGGATGGACC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-12.70,-12.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //