Array 1 183-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL891811.1 Acinetobacter baumannii 6013150 Scfld867, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================== ================== 182 30 100.0 30 .............................. GAAGATGAGCTAACAAATCAACGCCAACTT 122 30 90.0 5 ...........................NNN NNNNN Deletion [88] 87 30 93.3 30 NN............................ GCCGCGTGGGTAATGAACTGCTTTTTGTAC 27 27 90.0 0 ...........................--- | ========== ====== ====== ====== ============================== ============================== ================== 4 30 93.3 22 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : CATCAGTAGCAGAGTTAGACCCTTCAAT # Right flank : A # Questionable array : NO Score: 4.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.66, 5:0, 6:0.25, 7:-1.14, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-4.10,-4.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-2] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 183-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL891807.1 Acinetobacter baumannii 6013150 Scfld776, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================================= ================== 182 30 100.0 65 .............................. GAATTGTCTGCTGAAGACATTGAAGGAATTGTTCATGGCGGCATACGCCATTTAGANNNNNNNNN 87 30 93.3 30 N............................T GAGTGAGTTTAAAGAGTTCAAAGTTGGTGA 27 27 90.0 0 ...........................--- | ========== ====== ====== ====== ============================== ================================================================= ================== 3 30 94.4 48 GTTCATGGCGGCATACGCCATTTAGAAAAA # Left flank : TGCGCTGTTTTTGAACGTGTAATTGGAT # Right flank : A # Questionable array : NO Score: 3.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:-1.69, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.20,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1-241 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL891815.1 Acinetobacter baumannii 6013150 Scfld1004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================================================== ================== 1 28 90.0 30 --...........................G TTACATCATTGCTTTTAGTCTTTTCTATCT 59 30 86.7 63 ..........................NNNN NNNNNNCATGGCGGCATACGCCATTTAGAAAAGCATAAGCATAAAAATTATGTGTGAATATCA 152 30 96.7 30 .............................A TATGCAACAATAGGAAATTGCTCAGCATCT 212 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =============================================================== ================== 4 30 93.3 41 GTTCATGGCGGCATACGCCATTTAGAAAAT # Left flank : | # Right flank : GGGCCGCAACCATACGGTCTATGACTTC # Questionable array : NO Score: 4.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.66, 5:0, 6:0.25, 7:-0.74, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-4.10,-4.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1-551 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL891813.1 Acinetobacter baumannii 6013150 Scfld916, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================================ ================== 1 28 90.0 30 --...........................G TCATTGGCCGGCCATTCACAACCCCGATAA 59 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 119 30 86.7 64 ..........................NNNN NNNNNNCATGGCGGCATACGCCATTTAGAAACCAAAAAATGAGGAAATTGGACAATATCCAACA 213 30 100.0 39 .............................. CTCCAAGTAAAGAATAAAACAATATACCGCNNNNNNNNN 282 30 93.3 30 N............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 342 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 402 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 462 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 522 30 80.0 0 .......A.A.....T.T..........GC | ========== ====== ====== ====== ============================== ================================================================ ================== 9 30 90.0 36 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : | # Right flank : CGTTCAGGTTGAGGAGATGAAGTGATGTGATGTTTATGACGGTATACGTCACTTAAGCGTTAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAA # Questionable array : NO Score: 4.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.50, 5:0, 6:0.25, 7:-0.22, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.30,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //