Array 1 263134-262702 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN776178.1 Necropsobacter massiliensis strain FF6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 263133 33 100.0 34 ................................. ATTTCTTTAGTGACTTTATCCTCACTTTGTTCTT 263066 33 100.0 33 ................................. GTTAAAACAAAACCTATGCCGTCGTAGCCTTTA 263000 33 93.9 33 ........................A.......C AATACACCATAAACGATCTTGTCGTCGGAGAAC 262934 33 90.9 33 ...........T.........C..........T TTTCAGTTTGCGTGATGTAGTCAAAATCCGCTT 262868 33 93.9 34 .....................C..........C ATTATCAAGCGTCATAAAATACGGCGAATAGGAC 262801 33 87.9 34 ...........T.........C......G...C GCATTATGTGCGCTCCGCATCACGTTCGGACTTG 262734 33 97.0 0 ....................A............ | ========== ====== ====== ====== ================================= ================================== ================== 7 33 94.8 34 CCGGCTACCTACGCGTAGCCGTGTGTTGAAACA # Left flank : TATTCAGCAACAACTGGAATGTACGTATCAGTGATCCAGGCGAAGAAGGCGCACGCAGCCACTTTTTTGAAAAAATTTATCTGACCTTAGAAGCTCATATCGACGGCAACGCGATTACTTACGAGTTCACCCGCAAAGTGGAAGATCAAGTAAAAATCAACCGCACTTTCACCGATTTGCATGAATTATTTAAATTTTTAGGCGATTATCTGGACCCGGTCTCTCTCGGTTTTTTAGGGGTAAAAATCGGGAAACTACGGCGTTAGGGCGCAATCTGCTCCGAATATTTTTAAAGATATATTCATTATCTAATCGCTAACCGTTGGTTCACATAAAATCCTTCTAGCTTAGCGAATTCTATGTTTCTTTAACAAATCAGATACTTAACTTATTGATATAACATAAATACAACTATGTTATACTTGCTATCTGCCTTTTTGTTGCAGATCAGCGAATTCTTGCATTTCAAGCCAGAACCCTCGCCTTTTGCCAACAAGGCT # Right flank : ATGTGGATGCCTCACAAGCCAATAACGCGCTCAGAATTGAACAATGGAAGAAAAATTCCATTATTTCAAAAAATGCGGTAAAAATTACCGCACTTTTACTATCCTATTGAAATTAATGATTAAATTCCAGTTTTGGCGGGGTGTTTTCGGTTACGGTTTGTTCTTCTACCACAACTTTATGCAGCTGCTCTAACGACGGCAGATCATACATGGTATCCAGTAACAAACCTTCTACAATAGAGCGTAATCCGCGCGCGCCGGTTTTGCGTTCAAGGGCTTTTTTCGCCATTGCGCGTAGCGACTGCAGGGTAAATTCCAGCGCTACATTTTCCAAGCCAAAAAGCACTTGATATTGCTTGGTCAGCGCATTTTTCGGTTCGGTCAGAATTTTAACCAGCGCTTCTTCGTCCAGTTCGCTTAACGGTGCGATCACCGGTAAACGGCCGATAAATTCGGGAATTAAACCGAACTTCATTAAATCGTCCGGTTCGACCTGACTG # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGGCTACCTACGCGTAGCCGTGTGTTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCGGCTACCTACGCGTAGCCGTGTGTTGAAACA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.10,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 501369-502130 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN776183.1 Necropsobacter massiliensis strain FF6, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 501369 36 100.0 30 .................................... GGGGTTATCATCTATATCGTCCGGCACCAT 501435 36 100.0 30 .................................... AATGAGGGCGTACATAGCCTCATGAATCCA 501501 36 100.0 30 .................................... ACGTCGGCAGCTTGATTAGTTGCGACGGCA 501567 36 100.0 30 .................................... CAATAATTCATCGGAATATTGGACTTCTAA 501633 36 100.0 30 .................................... AACCGAAGATCGCTTTGTGCAAGTGCCTTG 501699 36 100.0 30 .................................... TTAAGCCGAGTGGGCATGTTGGCACAACAA 501765 36 100.0 30 .................................... CCAACCGAGCGTAGCACGCAAAAGCCGTTA 501831 36 100.0 30 .................................... ATTTAAACGTGCCGTAAGTGAAAATTTTGA 501897 36 100.0 30 .................................... TTCTTGTTTGCACGATAAGCATCAACCACC 501963 36 100.0 30 .................................... TTAAAAGCCGTCTTATCTAAGTGTGCAGTA 502029 36 100.0 30 .................................... CCCCTTAAGAATCCCCATAAAGGGGTCATA 502095 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 100.0 30 GTTGTAATTCCCATCTATATTTCGCAGTGTTATAAT # Left flank : TAGGATTCACGGCTGTGATCGCGCTATTGGCTATTTCGCGTAAATTCATCGATTCCCTTCTTTTATCTTGAGCTCTTTTTCAGCAATCTATTTAGCCTACCGCTGATATTGCTTTTTTGTGCATTTTCTGCTAGCTTACAAATATCTCCCGTAGAGCGGATTGAAGTCGGGTCAAGCCCATCAGCTTGAATAGTCGAGTCAACCCATTGAGCTGCGGGAGATTTTTCATTTAATTCTATTGCTTCAAGAGTATATAGTTTATTCGCTTGGTCTTTACGCGCGATCTCTTTGACTGTCAGCTTGACCAAATACTGATTGTTACCGTCTTCAATCGCTAAGAATAAACGATGAATAGCGGTAATATTAGGATCATTTGACCTGTCGGGTTTTGCCCGGCCATATAACGCATTTTCATATAGTTTATCTGCATTTGCGACAGCCAAAGAATGCAGATTTGGGCTGACCGACTTTCCAACTGCTTTGGAACTAAGCATTTTATC # Right flank : TTCAAGCCGCGCAAAGCCTTATATATCAAGGCGTTGCGCGGTTTTTTATTGCAAAAAATCACGTTAAAACAGTAAAAATTGGTCGGCATTCACTGTTTTTTCTTGGATTTTCTTCTCGCCAAGTAAAATTGCCATTGAAGCAAATTGCTTTTCAGTGACTTCCAAACAACGAACAGATCCTTCTTCGGGCAAATTGGCTCTTAACCGCTTATTATGTTTTTCCAAAGAATCTCGTCCGCGTACAATGCGAGAATAAACTGAAAGTTGCAACATTTGATAGCCATCTTTACGTAAAAATTGGCGAAACTGGTTGGCTGCTCGTTGTTTCGCTTTTGTAGTTACGGGGAGATCAAAAAAGACGATTATCCGCATAAATATTGCCTCACTCATAAAAATGCTCCGCAAGCGATCGAATTTCTGGCATTTTTAGCCAATCCGCATTTTTGTTGAGCAATGCCGTTTGTAGCGAACCGACACAACCATCGATTGCCGCCAGTACG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAATTCCCATCTATATTTCGCAGTGTTATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 106520-110998 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN776184.1 Necropsobacter massiliensis strain FF6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 106520 33 97.0 32 ................................C ACCGCACTTTTTAAGATTGCCGCGGCGCGGCG 106585 33 97.0 34 ................................A AAATTTAATAGGGGCTAGGATCTAATTTTTTGAA 106652 33 97.0 34 ................................C CTACATAATCCTCGCGCAATGCTTTCTGCCGTTT 106719 33 100.0 33 ................................. AAAAACACGTCTCCTATCGCTTTAGGCGCATAT 106785 33 97.0 35 ................................A ATTTGCACAAGTTGAAGATCCGGGGTATTTACAGA 106853 33 97.0 34 ................................C GTTTAATATTCTGAATATAGATAAGTGCAGCGAA 106920 33 100.0 33 ................................. CTTTATCATTATCTAGGACAACCCACTCTTTCC 106986 33 97.0 33 ................................A ACAGTGCCCTCTTTAGTATATTGATTATAAGCG 107052 33 97.0 34 ................................A TTATCAGATGCTCAAATTGGCGAACGTGTAATAA 107119 33 97.0 32 ................................C AAAGGTTTTAACTTATCAAATTTTAAATCTAG 107184 33 97.0 33 ................................A ATTTATACTTAGTTTGACTTCTGATCGAAAATC 107250 33 100.0 33 ................................. AAATGCTTTTCTAAAAGATCTAGCCACGTTGCC 107316 33 100.0 34 ................................. TCATATAATTTTAAAGTTTGGTTCATTGGGTTAG 107383 33 100.0 34 ................................. AACGTTTAGCTATGAATTTGATGAAATTGTTTAA 107450 33 97.0 33 ................................A GCGTACCGCCTTTTAATCCGACTAACGGAATAT 107516 33 97.0 35 ................................A TCACAATCCGAAGCAGATCATGCGTTAATTAATAT 107584 33 97.0 35 ................................A AATAATATTTTTTCTTTAATATCAAAACATTCTGG 107652 33 97.0 34 ................................C ATTGGACAGGGTATTCAAAACCTTGACTATTGGC 107719 33 97.0 33 ................................C ATATTGTTTTTAATTTTTCAGCGTTTTGTTGAA 107785 33 100.0 34 ................................. TTATGCCCTCTGTCAAATAAACGTTTCAGTCTAG 107852 33 100.0 33 ................................. AACTCTGTTTCAAGTGCTACGTCTTTTAATTCA 107918 33 100.0 32 ................................. TAAAATTGAAACTGTCTTCATCGTTATCATCT 107983 33 100.0 33 ................................. GCAATTTTATTTAACGTCTGATTAAGGGCGTTC 108049 33 97.0 33 ................................A CCCAAACCGATGAATGTTCGTGCTAATGGTTGC 108115 33 97.0 35 ................................C ACTGTTGATGATTACCTCCGATATATGTATTTGGC 108183 33 97.0 34 ................................A CCCAATCTTTAGCATTGCCTGGCGCAACCCATGC 108250 33 97.0 33 ................................A ATTCTTTTGTCAAATTCCCATAAGCCAGATCGT 108316 33 100.0 33 ................................. AATTGGCTGCCTCGTTGCATATCGGGGGATTGG 108382 33 97.0 33 ................................C ATGCTTTAGGCTTTTAAAAAGAGGATTAAAAAA 108448 33 97.0 33 ................................A ATTACACTAACGTTGAATGTAGTGATGTTGAAT 108514 33 100.0 35 ................................. CTTTGTCGAAAGCGTCCACGGGCTAAATTCAGGAA 108582 33 100.0 33 ................................. AAAGTATAGCGGAAAATAATGCGAGAATAATGC 108648 33 97.0 34 ................................A CTGATATGTAGTACCAATGCGCGCGTTTACAATA 108715 33 97.0 33 ................................C ATGCTTTAGGATTTTAAAAAAAAAGAGGACTTG 108781 33 100.0 33 ................................. AATTCACGGGTAGCTTTTGTTTCATCTGCTTTG 108847 33 97.0 33 ................................A TTTTTATCCAAAAATCCATTATACTTTATACTT 108913 33 97.0 34 ................................A CTTTACAATGTAGGTATTTACGGCTGGACTTGTG 108980 33 97.0 33 ................................G TTAAGCCAAATCTCAAAGCGTTGTGTAGCAATT 109046 33 97.0 33 ................................C CATCCAAACATTGGGGATAACCTCCAAAGCGTA 109112 33 97.0 33 ................................A ATACCAAAATCTTGCAGATGCGCTTGTACATTA 109178 33 100.0 34 ................................. GGAGAACTATTTATTTGATTATCACAAAATTCAT 109245 33 97.0 33 ................................A GTAACTTACAAAGTATAATGTACCATTCATAAA 109311 33 97.0 35 ................................A ATTAAAGAGGGATATTTAGCGCCGCTTATTCCTAA 109379 33 100.0 33 ................................. GCAATTTTATTTAACGTCTGATTAAGGGCGTTC 109445 33 97.0 33 ................................A CCCAAACCGATGAATGTTCGTGCTAATGGTTGC 109511 33 97.0 33 ................................A CTACTGAAAACGCTTTGAAATTATTAGGAGATT 109577 33 97.0 33 ................................G GCAAAGATAAAAACGCTGGGCGCGGAATTGACG 109643 33 97.0 34 ................................C ATTGCTTAACGAAACCGCCATTGCTATGCACTGC 109710 33 97.0 33 ................................C TCGATGATAGAGGTCACGCCATCTTGAATTATT 109776 33 100.0 34 ................................. AGCGCTGTTATATCCCGCCGGAATGGTGACATAT 109843 33 100.0 33 ................................. CGTAAGCATGAAGAGGTATCTGAGAAATTATCT 109909 33 97.0 33 ................................C AATTTATGCTCACTTTCTCTGGCCAAATCATTG 109975 33 97.0 33 ................................C GCATAGGTATCAATAAAATTATTATAGATAGCT 110041 33 97.0 32 ................................C TGACGTTGTTATTGACAAGTTGCACAAATGAG 110106 33 100.0 34 ................................. GTTGCTGTAAGTACCGTCGATGGCGCAATTATCG 110173 33 100.0 34 ................................. AATCCAATGAACCAAACTTTAAAATTATATGAAG 110240 33 100.0 33 ................................. TCCTTTTTTATCCTTGCGTATATCCAAAATCAT 110306 33 97.0 34 ................................A TCAACCAAGCTGTCCGATAACGCCTCAAAAAATG 110373 33 100.0 34 ................................. CAATCCAGTCTGAATTGAATCCCATCTCGTGTAG 110440 33 97.0 33 ................................G GCAATGCCAAAAAAATGGTACGCTGGGAGGCGA 110506 33 100.0 32 ................................. ATTTCTGCGATCTATGATTTTCATAATTTTAA 110571 33 100.0 34 ................................. TTCCCATCTAAAAATTTTTGCATCGTTTTGCGAT 110638 33 100.0 33 ................................. ATTTCTGCGATCTATGATTTTCATAATTTTAAT 110704 33 97.0 33 ................................A TTAATAAAATCATCAATTGTCGGATAATTTGCA 110770 33 97.0 33 ................................C GTGCCTAATTGATAATTACTCCATTGCCCATTA 110836 33 97.0 33 ................................G AGGTCTCTGTCGATTTCATCTAACGTAAACCGA 110902 33 97.0 32 ................................A AACATACTTATATGACGGAAATTTTGTTTGAG 110967 32 72.7 0 ..A.....T.G...-.T.G.T.A.........A | ========== ====== ====== ====== ================================= =================================== ================== 68 33 97.7 33 CCGGCTACCTACGCGTAGCCGTGTGTTGAAACT # Left flank : TTTTAATGAGATAAAACCATGCTTATGTTAATTACTTATGATATATCATTTGAAGATCCCGAAGGACAGGTCCGATTACGTCGTATCGCCAAACATTGCTTAGACTACGGGGTTAGGGCACAATACTCAGTATTCGAATGTGATGTGACGCCTGAGCAATGGGTAAAACTAAAACGGAAGTTATTAGAAACCTATAATCCCGAATCAGATAGCCTCCGCTTCTATCATTTAGGTAGTAAATGGCGAAATAAGGTGGAACATCACGGCGCTAAACCTGCGCTGGATATTTTTAAGGATATATTAATTCTCTGATCGCTAACCGCTGGTTCACATAAAATCCTTCTAGGTTAGCGAATTTTATGTTTCTTTAACAAATCAGGTACTTAACTTATTGATATAACATAAATACAACTATGTTATACTTGCAACCTGCCTTTTTGTTGAATATCAGCGAATTCTTGCATTTCAAGCCAGAACCCTCGCCTTTTGCCAACAAGGCT # Right flank : AAATATCAGTACGATGGAAGATTTTTCCGGTGATTAAACGCAGGCTCTTGTTACCGCATTGATTTGAAAATATTGAATGAAATGAAGAATAAGTAGCGTTAAAATTAAAAGGACTAAGCCCTTGCAATGCAGAACTCAGTCCTTGAATTAAGTGAGTCTAACTTTTTGAGGTCAGATCAACACAGTCTTTAATCTCATCGTTTTGCCTTAAAAGCTGATTAATTCCACCGCACTTTGTTAATAACCGTCGCCTAGCATATTCGGCAGGAAAACGGCGTGTTGAATGCGTTTTACCCGCGATTCAATGCGTCCGTCGTCATACAATTCGATTTCACGCCAGCCGGGTTGTAATGTGTCCAGTGCAAAACTGTTGCTGTCCGGCTTGAACTGGACACAGGTGGAAGGTGTTGCCAGCACGCGATAACCATACCATTCGCCGTCCACTTCCTGATGAATATGCCCGTATAAAATACCTTTCACGTTACGAAACGGTGACAATG # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.46, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGGCTACCTACGCGTAGCCGTGTGTTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCGGCTACCTACGCGTAGCCGTGTGTTGAAACA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.20,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //