Array 1 67-1233 **** Predicted by CRISPRDetect 2.4 *** >NZ_SUSS01000078.1 Tissierella creatinini strain BN11 NODE_125_length_1274_cov_637.162428, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 67 33 100.0 33 ................................. AAACATAGTCGAAGGACTTACAAAAGGTATAGT 133 33 100.0 33 ................................. TAATGCTTGATGCTGAAGCATGGCAGGATATTC 199 33 100.0 33 ................................. AGAAGACGCAATTGCCGAACCAGTCTTAATTTT 265 33 100.0 35 ................................. CAAGGTCAACAAATCCATGGGAGCCGGGGAAATAA 333 33 100.0 33 ................................. TTAATACCAATTTGGAGGTGGGATATGGACGAT 399 33 100.0 34 ................................. AAGGATGCAGTAGATAAAGTAGGTGAGATGTTGG 466 33 100.0 34 ................................. CTATTGGGACGTGCATGTTGTGTAGCGTATTAAT 533 33 100.0 34 ................................. AGTTAATGAAATGGGTATTTTAATCGGATACCCT 600 33 100.0 33 ................................. TAATAATGCATATAGAGGTGCATCGGCACATTA 666 33 100.0 33 ................................. GGTAAAGGGGTAGAGGTAAGCCCGGTTAACAAT 732 33 100.0 36 ................................. CTTCTTCCGGTCTTAATGCTGCCTCCTACAAATCCC 801 33 100.0 35 ................................. GATTCTCTGCCTTAAGGTTCTCATTCTCATTTTCT 869 33 100.0 34 ................................. AATTACAACCAATATATTATATGCACTCTGATAA 936 33 100.0 33 ................................. ATCTGAACAAGTTGGATAATATTCAATCTTAAA 1002 33 100.0 33 ................................. AGGATACTGATGAAATTTGAAAAGGCAATTAAG 1068 33 100.0 33 ................................. ATTTATCGTCAATCTTTATTTTGTCGGCTGTTA 1134 33 97.0 35 ................................G TGAATATAAAAATTGTAAAGGTACACCAGTATCAT 1202 31 81.8 0 ..................C.-..-.T...C..G | T [1231] ========== ====== ====== ====== ================================= ==================================== ================== 18 33 98.8 34 GTCGCATCCCTCACGGGGTGCGTGGATTGAAAT # Left flank : AAACAACGAATTATATTTTTTATACTAAATGCGACAACTTACTTGACAAACACCGGTGCTGACCATG # Right flank : TAAGTTGTCGCATTTAGTATGAAAAATATTATTAGTTGTTT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCTCACGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCATCGCTCACGCGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.60,-5.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1601-98 **** Predicted by CRISPRDetect 2.4 *** >NZ_SUSS01000064.1 Tissierella creatinini strain BN11 NODE_84_length_1707_cov_531.887409, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 1600 33 100.0 34 ................................. ATTGTTATGGATATTCTTAACAGTACCTAGATTG 1533 33 100.0 34 ................................. ACTATTACCCCTGTTTCTATGAGATGATCTATAA 1466 33 100.0 34 ................................. ATAAAAAGTTGGAATCAGATAATTATGCAATCAT 1399 33 100.0 34 ................................. ATAGTAGGTCCTAAATATCCATCAATAGACCATG 1332 33 100.0 33 ................................. GATTCAAATAAATGGAACTAATGGTAATAATAT 1266 33 100.0 35 ................................. GTCATTATATAAAAGTGAGAACCATCTTTTAGTAT 1198 33 100.0 34 ................................. TATAAGGGGCTATGCTAGACCTAAATATAAGGAG 1131 33 100.0 34 ................................. AGGTAGAAGATCATTCAATTGCTTGATTATTTTT 1064 33 100.0 34 ................................. GGAAAGAAGGTTGTTGAAGCAAGTGCAGATTTGC 997 33 100.0 34 ................................. GGAGATAGGTTAAGAGAGTTAAGAGATGAAAAAG 930 33 100.0 33 ................................. CCAAGTAGATCACGATAAAGCAAGTGAAGGTGG 864 33 100.0 33 ................................. AGAATTGTATGTAATAATTGTGGCACTGTATTG 798 33 100.0 34 ................................. TTAAAATAAATGTAAAATAAGTGTTGACACTTAC 731 33 100.0 35 ................................. TTAACCTATGTGTATTATCTGCATACCCTTAGTAG 663 33 100.0 35 ................................. AGGTCTACATCAAGGTGGAATAAAAAGAGAATTGA 595 33 100.0 33 ................................. AAAAAGAGCATTAGACCAAACCATAACCACATC 529 33 100.0 33 ................................. CGGCAGGAGTAGTGATTATTTCATCTATTCTTG 463 33 100.0 34 ................................. ATAAATCAACCAACAACGGAGAAACATTTTCAAA 396 33 100.0 33 ................................. CATTTCCAAGCGAATCATATACAATTACTTTAT 330 33 100.0 33 ................................. GGAGAGATCTCCTTGTCCACCTGCTGCATCTCC 264 33 100.0 33 ................................. AAAGATGGTGGAGAAGTATCAGCAGATGGATAT 198 33 100.0 35 ................................. GCAACTAGCACTGTAGATACCCCTAAAGCAATTGC 130 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 23 33 100.0 34 GTCGCATCCCTCACGGGGTGCGTGGATTGAAAT # Left flank : AACAACGAATTATATTTTTTATACTAAATGCGACAACTTACTTGACAAACACCGGGGGTGCGTGGATTGAAATTGATAACTCTTTCTTTTTCGCCACATATATCAC # Right flank : TATTCAAATTCTTCACTCCTTATGATTGAATCTATGTCGCATCCCCCCTATGTGGTAGGATAGTTGTCGTAGAGAAAAAATAGTATATAATAGATATA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCTCACGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCATCGCTCACGCGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.60,-5.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 4217-106 **** Predicted by CRISPRDetect 2.4 *** >NZ_SUSS01000023.1 Tissierella creatinini strain BN11 NODE_23_length_42735_cov_1208.359934, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 4216 33 100.0 33 ................................. AGCAGGTCTTAATAACACTTACAGACTTATTAG 4150 33 100.0 34 ................................. GATATAATCAATACATTCTTGGGTAATAGGACTT 4083 33 100.0 34 ................................. AATGTAGGTGATTAAATGAATATACACAATGAAG 4016 33 100.0 34 ................................. GAAAGAAATTGGTACAGAAATTGGATATTATTAT 3949 33 100.0 34 ................................. GTAGATACTGTTTAATGTTAGCTTGTTTGTTCTC 3882 33 100.0 35 ................................. GAATTTCAATCGTGGAAACAGTTGTTAGATACTTA 3814 33 100.0 35 ................................. ATTGGAGGTGGGCGGAACATGGATATAGTAGATAA 3746 33 100.0 34 ................................. AACATAGCCATTTACTGCTGTCTTAGGGATATCT 3679 33 100.0 35 ................................. ATGATAAACTACAAGGTCATCAACACCATCATCAT 3611 33 100.0 34 ................................. ATACAGCTCAAAGATATAACAGAGTTGATAAAGT 3544 33 100.0 33 ................................. ATCTGGTTACGCTCATAAACGCATGAAAACCGT 3478 33 100.0 33 ................................. AAAATTGCTATAAGGTATTGCATCGACTTTCAT 3412 33 100.0 34 ................................. ATATATTGCTCGTAATATTTCCCGCCTATATCAT 3345 33 100.0 34 ................................. TCGTAATCATTTAAAGCTAATTGTCTGCATTGCT 3278 33 100.0 35 ................................. CAGATAGTTCGTACATTTTAAAACTCATATTTTCT 3210 33 100.0 35 ................................. CTGGGCATCTTCGACCGCCTGAAAGGTTACACCAG 3142 33 100.0 34 ................................. GAGAGGTTTTTATTTCTATGGTGCGCCTTCAGGG 3075 33 100.0 34 ................................. GTAATAGTCCAATGTTTTGACCCTGGAATTGGGA 3008 33 100.0 33 ................................. TGGGTTAATAGGGTGAGTAGAGCAGTTGGAAAG 2942 33 100.0 34 ................................. GCGAAATGGAAAGCGAGGTTGGATGCGTTTTATG 2875 33 100.0 34 ................................. AATCTTTCCGTTAATACCTTGCTCTATTTTTTCT 2808 33 100.0 34 ................................. CAGTAACTCATCTATGACTGCATCTCTGTATAAC 2741 33 100.0 33 ................................. GTAATCCAACTTAGGATACGGACTGCCTCATAA 2675 33 100.0 34 ................................. AAAAACTCGGTTATTATATCCCTATCATCATCTG 2608 33 100.0 34 ................................. ATAACAAGCTCCTGATTATCTTTAATAAATTTAT 2541 33 100.0 34 ................................. ATAGGTTCCTTCTTTCCAAAAGGTTCTTTAATAG 2474 33 100.0 34 ................................. AGGATGGATGTCATCAATGTGTCAACTGCAGATA 2407 33 100.0 34 ................................. CCATTATGAAATCAGCCAGGTGCTCCTTGCCAAC 2340 33 100.0 34 ................................. ATTTTAACCTAGATTAAATAATACCGTATAATAT 2273 33 100.0 34 ................................. TTCTTTTTCTTTATTTATATATTGCTCGTAATAT 2206 33 100.0 33 ................................. AACCTACCACCAATAATTGGTTTCTTAGCTTCT 2140 33 100.0 33 ................................. GAATGATGTCGCATTGGTTAGGTTAAACTCTAT 2074 33 100.0 34 ................................. AAGCAAGAAGCTCCACCAGAGCCACCGGCACCAA 2007 33 100.0 34 ................................. CACCCCAACCACCCGAAGAACCACCAGACCCAAA 1940 33 100.0 34 ................................. ATTCAAATATCATTATTTTAATTGACCTATTTAA 1873 33 100.0 35 ................................. ATTGATAAGAATAAAAGGCCACTTACAGATAATGC 1805 33 100.0 34 ................................. TTTCATTAAGATAACCTGGTTGCGGAACAAATAG 1738 33 100.0 33 ................................. ATGAATCAATTGTAAATTTACCAAAGAATATAG 1672 33 100.0 34 ................................. AGGGTCGCTCCCTCTATGCATTCGCTTCCTGGTC 1605 33 100.0 34 ................................. TTATAGGAATTTATAGATGAGTTTAGGTATCATC 1538 33 100.0 34 ................................. AGATTATAAAGATAAAGCAACAATTAATATTATG 1471 33 100.0 33 ................................. AAATGAGATTTATCATCTAATTCGATTACTATT 1405 33 100.0 33 ................................. CTATTGGTATGTTGCCTTTTTTATCCTTCAAAT 1339 33 100.0 35 ................................. ATTTTTTAATAATGGAGGGTAATATGAAAAATCAA 1271 33 100.0 33 ................................. AATTAAAATGTAGGTAACTATGGTGTAGTTCAT 1205 33 100.0 34 ................................. GACTTTCAGTAGTGGCATATCTTTGGGATGCCTC 1138 33 100.0 34 ................................. TTAGAAATTTTCTGCTCTAGCGAATAGATATTAG 1071 33 100.0 34 ................................. ATCCTAACTTCTTATAGTTTCCTATAAGCTCAGA 1004 33 100.0 34 ................................. ATACTCGACAACATCCATAGCTCACCGGTAGTAA 937 33 100.0 34 ................................. GATAAACCCTTTTATCTTCCTCTGGCTACCATTA 870 33 100.0 34 ................................. GCTGGAATACTTATAGGTGGAGGCATTAGCTGGA 803 33 100.0 34 ................................. TCTATAGATGTAGCCATAAATCCAACACTTACAC 736 33 100.0 33 ................................. AGAAAAGACCTAAGAGGAGCAGTTGATAGTCAA 670 33 100.0 34 ................................. ATTATGGTTATGGTTAATTGTTCTTATTGTGGAG 603 33 100.0 34 ................................. TCTTTTTAAGTTGTTGGGCTAAATTCATTCTATT 536 33 100.0 33 ................................. TGGTCTATTACATATTCAGTACAAAACCTCTTT 470 33 100.0 33 ................................. AATATAAGTACAGATGACGGCACTACGTGGGAT 404 33 100.0 34 ................................. ATATCAGATGTGGAAAAAGCTATAGAGGAATATG 337 33 100.0 34 ................................. CTATTGCTCTTTCCATTTTTTTCATCCCCTTTTG 270 33 100.0 33 ................................. AAGCTGTATATTGCATTGTCTACAAAGTTGTTT 204 33 100.0 33 ................................. TGAACCTCTAATAACCATTTAGTAACATCCTTG 138 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 62 33 100.0 34 GTCGCATCCCTCACGGGGTGCGTGGATTGAAAT # Left flank : TATTGGCTAGAACAATAAGAGGGGATTTGGAGGAATATCCGCCATTTTTATGGAAGTAGGGATAATATGTATGTATTAATTACTTATGATGTAAATACTGAGGATAAAGCAGGGCGTACAAGACTTAGAAAAGTAGCAAAGGAATGTGTTAATTATGGACAAAGAGTGCAAAATTCTGTCTTTGAATGCCTGTTGGATCCAGCCCAGCTTAAAATCTTGGAGAAGAAATTATCAGACATTATTGAACCTAAAAAGGACAGCATTAGATTTTATCACATGGGGAACAACTATAAAGAAAAAATATGGTCTTTAGGTGTAAAAACAAGTTTTGATATAGAAGGATTTCTTAATGTTTAGCATAGTGCGAACCTAAGGCTAACATAGTTTTATTGATCGCTTCGCACTAAATATTTGATGTTTTTTTACAGAAATTAGGTAAATAATGAAGAAACTAAGTACTTAATATTTAAGCAAAAGCATCAAAGCCTTGATAAAGGGCT # Right flank : TTAACACTGTAACAAATGTAGTTATGTTCTATGGGTCGCATCCCTCACGGGCCCTATGTGGTAGGATAGTTGTCGTAGAGAAAAAATAGTATATAATAGATATACG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCTCACGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCATCGCTCACGCGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.60,-5.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 20285-13982 **** Predicted by CRISPRDetect 2.4 *** >NZ_SUSS01000016.1 Tissierella creatinini strain BN11 NODE_16_length_55961_cov_1234.383411, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 20284 30 100.0 35 .............................. GGCTCATAATCTGCATTTATAGCCTTTTCCTTAGC 20219 30 100.0 35 .............................. TGGAGATTTTGAATTGCATTGTGCTTTGACCCCTG 20154 30 100.0 36 .............................. ATCATTGTAGGTAACTGCTTTTTTCGCCTCATTCCA 20088 30 100.0 36 .............................. GTACCAATACCAGGACGACTTCTTTGGTGGAGGAAA 20022 30 100.0 37 .............................. TAACTCAGCCGGAGTTTACCCAACATAAGTTAGATTA 19955 30 100.0 37 .............................. ACTAAAACACATTATTTAAAAGCCACAGATCCAAAGC 19888 30 100.0 36 .............................. GATTTTGTTAATATTAAGATAGATAAAGAAATTGAA 19822 30 100.0 37 .............................. ATGGCCTTATAGACAGTGCATTAAGCTGGGGTAAGAA 19755 30 100.0 36 .............................. GTTCCATGGACTCACTCATATTGCCATAGAATGCAA 19689 30 100.0 36 .............................. TTAGCCTTTAGCATCTCAATTAAATTCTCCAAACTC 19623 30 100.0 35 .............................. TGGTCTAGTCCTCCTTTGATACTTTTTCAATGTGA 19558 30 100.0 36 .............................. ATTCTGTGCCTACAAACTTCTTGCCGTTTTTATATG 19492 30 100.0 36 .............................. AATATGTAGCAGTCATGTAGTCTTCGAGGAAAATAA 19426 30 100.0 37 .............................. ATGATTGGACAACATGATCTCTATACAACTTATACTC 19359 30 100.0 36 .............................. AATAAGGCCTTAACTAAGTCCCCCATCAATTCGACT 19293 30 100.0 36 .............................. TTTGCAGATGCTGGTCTAACTGGTAGAAAGATTATA 19227 30 100.0 36 .............................. TGACATAGCAAAGTCATATATATTGGAATTTTGTGC 19161 30 100.0 38 .............................. TTGTAATTCGGTTCTCCTGCTACCACCTCGGTAAAAAC 19093 30 100.0 36 .............................. TTGATGACCTAATAAAGCTATCTCAGGAGGCTTATA 19027 30 100.0 36 .............................. TTAATGAAATGGAGAACATGAGGAAGGAACTAAACA 18961 30 100.0 36 .............................. TACCATTTTAAGCCGAATCTCTCTTTTAAGGTCTTA 18895 30 100.0 36 .............................. AAGGGAAATCGCAGCGTGAAGCTTATAAAATAGCAT 18829 30 100.0 36 .............................. TGACTAGATGGGCCACTAAAGACCTTGCAGGAAGAG 18763 30 100.0 36 .............................. CAATAAGAAAATATTTCGAACTAATAAGTTAGGCAA 18697 30 100.0 37 .............................. TCGAAAAAGAATGTAAACATTATGAGGCTCCTTTCGC 18630 30 100.0 35 .............................. TTGGATGAAGTAGCCGACACACTAAAGAATTGGAT 18565 30 100.0 36 .............................. AGTGACAAATGAATGCACCACAACGGAGGATATTGC 18499 30 100.0 36 .............................. ATATTTATTATTTTTTCCATGTTATGCACCTACTGT 18433 30 100.0 37 .............................. CAGATATAACCACTACACAAACAAGCGAAACCTATAC 18366 30 100.0 36 .............................. GCAGAAACTTTACCAGCACCCTCACCAGACTACGGA 18300 30 100.0 36 .............................. AAGATATAATTACCATTGCAATCTTTTCATATTTTT 18234 30 100.0 37 .............................. ACGCAAACGGAGTGTTGTTCGAAAATGCTAATGCCAC 18167 30 100.0 35 .............................. CCAACCTATTTCTTTTAGTCTTCTATCTGCGCTAG 18102 30 100.0 36 .............................. AACTTTTCATCGATCCTTTTATGCTTTTCTTTGCAT 18036 30 100.0 37 .............................. ACACTTTATGTGGAATAATTGTTGTATTTACTCCACA 17969 30 100.0 35 .............................. AATTCCGGAAGTTCAACCAGTGCCTTAAAAGACTT 17904 30 100.0 37 .............................. TCATTAGCACCAATAAGTCTTGAATTGGTATAATCAT 17837 30 100.0 36 .............................. ATGTATCCGGATACTAACTGGATTAAGGGCGAGGAC 17771 30 100.0 36 .............................. GAACACACAGACGATGGATACAATGCTCTTGCTATG 17705 30 100.0 36 .............................. TGTGGACACGAAGGTAGAACGGATATTATAGGGCCT 17639 30 100.0 37 .............................. CAATGCAATAAATGGAGCTTATGGCAACTCAACACAA 17572 30 100.0 35 .............................. ATAAGGCAACTGCTGATTTGAACAACCTGGAGAGG 17507 30 100.0 36 .............................. TATGTTATAGCTGTTATGTCTTTGGGCCCTGCTTTT 17441 30 100.0 36 .............................. TCGAATGTTCTAGCTGATATCTCCTTGAATGACTCT 17375 30 100.0 36 .............................. ATTATGATTGAGTTCCTGCCTCTCTACATCCAAGGT 17309 30 100.0 37 .............................. ATATGGACTTAATCTTCAATTTTGCAGCAATGCAATA 17242 30 100.0 36 .............................. TTTATACCTCCTTGATTATTAGTTCTTCTCTTAATT 17176 30 100.0 36 .............................. ATATTAAGTGCCCCACTTTCTACCAAATCCATCATG 17110 30 100.0 37 .............................. GTCCTTATCCACTCAATCAACTGAGGGGTATTAACTA 17043 30 100.0 36 .............................. ATCATTGAAGATGCAGAGGCTATTCATAAAAGGGCA 16977 30 100.0 35 .............................. TAATATACTGTATGGTATGATTTTGAAGGAAGGTC 16912 30 100.0 36 .............................. TTAGATGAGGATTTAACTTTGTGGACTACTTGGGAT 16846 30 100.0 36 .............................. CCACCATCTAAGAAGATAGCTCCATCTAATCCTAAT 16780 30 100.0 35 .............................. AAGCATTCAACTTCTTTGCAATTGATTGTAAAGGC 16715 30 100.0 36 .............................. AAGGTTGATGATGAAAACTCTCAAGAAGCACTTAAG 16649 30 100.0 35 .............................. AGAGTTAAGCCAGCATTTGCTTAAGCTATATGAAT 16584 30 100.0 36 .............................. TAGGCTAATATAGTTCCACGCTTGTACCACTTAGGG 16518 30 100.0 36 .............................. ATAAAAGCTCCTTCTACTATAATAGCTGGAGCTTTA 16452 30 100.0 36 .............................. ATGAGGTAATAGTACCTAAGATTGATAAAGTGTACA 16386 30 100.0 35 .............................. AATTATTTTAAAGCAAGTGTTTCCAACAATTAAAG 16321 30 100.0 36 .............................. TAGCCAGCCCCCAAACGGATTGAAGATTTTTTGCAT 16255 30 100.0 36 .............................. TCAATTAAGGGTTCATGTAGGCCATCTATTAGTATA 16189 30 100.0 36 .............................. GTTATAGTCATATCGTGACCACTCGATAATACATCT 16123 30 100.0 36 .............................. TAGCCTGTAAAAGTTCTTTCAGTTCCGTTTAAGTGG 16057 30 100.0 36 .............................. TAATATTTTGTGAGCTTTATCTTCTCCTTAAAAGTC 15991 30 100.0 36 .............................. AAAGCAGATGAAGGGTAAAGAGTTTAAGAATCTATC 15925 30 100.0 36 .............................. TAAAGTAAGATTTTTGGCATAATATTTGACATCTCC 15859 30 100.0 36 .............................. AATACTAAAATAATAACTCCAATAAAAACTTATGAT 15793 30 100.0 37 .............................. TGTGGACACGAAGGTAGAACGGATATTATAGGGCCTA 15726 30 100.0 36 .............................. AATACATAAGGTTCATCTGTTAGAGGATGCCTCTTG 15660 30 100.0 36 .............................. GCCAATAAAGGTTTTGAAAACTCTGCCTCCATGTTG 15594 30 100.0 36 .............................. AGGTCAACTTCTTCATCTTCTACTAAATCCCATATA 15528 30 100.0 36 .............................. ATGAGAAATTCAGATTAAATCAAACAGAAAGAGCAA 15462 30 100.0 35 .............................. ACTTATATTTCAAAAATACCTTCTAGCGGATGGAG 15397 30 100.0 35 .............................. CTCTATAAGATACCTAATAACTAATATTAGATATC 15332 30 100.0 36 .............................. ACAGTCTTCTGTAGACCTGGAAAATTATCTTTTACA 15266 30 100.0 37 .............................. ACAGGAGTTCTTACTATTCCTAGTAAGACAGGCGTTG 15199 30 100.0 36 .............................. CTCAACCAATCCATTATGCTTGTCTACCTTCTTTTC 15133 30 100.0 36 .............................. AAGTGTCTTCTAAGTTGTGCAACACTCCAACCTCTT 15067 30 100.0 36 .............................. TCAAATGTTTTAGTTCTATAATCTGAACTATTAAAT 15001 30 100.0 35 .............................. TAAGGTACATTGCTATCCTTCAAACTTTCCCCAAT 14936 30 100.0 36 .............................. TTTCCCCTTAAATCCTTCCATAGCTTCTATATGTGT 14870 30 100.0 36 .............................. AACAATACTCTTTCTAACGCCGAAATTGCCCTCTAC 14804 30 100.0 37 .............................. CAAGCTAATAGTTTACTTATAGGCTCTACTGTATCTA 14737 30 100.0 36 .............................. GCAATAACCAACTACATAAAATCGAAATACCATCTA 14671 30 100.0 36 .............................. AAGATAAAACTAGCAAAGAAAAGCAAAAAAACGAAG 14605 30 100.0 35 .............................. GGTGCAGTTGCATGGCTTACTGGATATGACTATAA 14540 30 100.0 35 .............................. TTATATAAATCCCTACCCACAACAATATATTATCA 14475 30 100.0 36 .............................. ATCACTAACTACCAAGCTTATGTAATGTTTATCATG 14409 30 100.0 36 .............................. AAATAAGAAAGATTGGGATAATGCAACAAGCGACGT 14343 30 100.0 37 .............................. TTAGCTTTTATTTTGTCCCTTTCAAGCTTCTCTCTGT 14276 30 100.0 36 .............................. TCATTAGCTGCACATAATAATCATCGTGATTTGTTT 14210 30 100.0 38 .............................. CCTAATATACCCATACCTTTACCAAACTCATCTTCAAA 14142 30 100.0 35 .............................. AAGGTTTTCTCTACCGCTCCAAGGTAATCGGTTTC 14077 30 100.0 36 .............................. GCCGGTGGCCTCGGCTCACCGACCTCCCCGCCACTT 14011 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 96 30 100.0 36 GCTGAACCATAACATGGGATGTATTGAAAT # Left flank : ATCCAAGGCTTAAAAGAAAAGTTACCTATCAAACATTAATAAAATATGAATGTTATAAACTTATTAAAGATATATTGGAAGGAGCTGAATTCATTCCATATAATGACAAAACCAAAAGCTAAAAATTACAATTATAATTATGTATTTCTTTTTTATGATGTTAATGTAAAAAGGGTTAGCAAAGTATTCAAGGTATGTAAAAAGTATCTTGAACGCTATCAACTTTCTGTATTCCGGGGGAACATCACACCATCGAATTTGATTAAACTTAGAAATGAGTTAAAAAACATTATTAATGATAATGAAGATACCGTAGCAATAATAAAACTTCCAGGTGATTTTTCTTTTGATGAAGAGATAATGGGAATAAAACTAAAAGATGAGACTAATTTATTCTTTTAGTTAATTCTTTGATTATCGCTGGAACAAATAATCAGAAACTGTGGTATTGGAACACTTATGATTATTGTGTTATAATTGGAATATAGTATTTTACTATG # Right flank : GCTAAAAAGAAAACCACTTTTTCCGAATAGTTTGAAAAAATCTCTTTTCTAGAATGTATATTTATGGTATGATAAAAAGAATTAATTAAAGTGTTTAATTTAAGGAGTAAATTATATGAACCTCACTAGAAAAAATTCATCTAAAGAACAAAATTTCTTTTTTATGGGCCTTAGCTTTTATTATAGCTACGGCTATTTTTCATGAAAATATAGGTGTTTTTTAATCTAATGAGTAGATATATTTATATACAATAGTGTAATACCAAAAGACTCGTTAGGAGTCTTTTTATTTTACCCAAAAATCCATAGGGGGGCATACTGTGAGAGAGAACTTCGATATACATGAATTTAATATCACCATAATAGGACTAGGGCTTCTAGGAGGCTCCTATGCTAAGAGCTTAAAGAAGCTAAGTCCAAAGAATATATGGGCTGTAGATATAGATGAAAAAGCCCTGAAGGATGGTGAAGAACTAGGGGTAATAAATAAGGGTTATAGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGAACCATAACATGGGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.60,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA //