Array 1 1196068-1194149 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020620.1 Lactobacillus acidophilus strain DSM 20079 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 1196067 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 1196006 27 100.0 34 ........................... TAAATCCGGACAACGCTTGCCACCTACGTATTAG 1195945 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 1195884 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 1195823 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTCGGCAGAG 1195762 27 100.0 34 ........................... CTTAGGCTATTCCGCACACAATATGTGGCGTGGG 1195701 27 96.3 34 ..............A............ TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG 1195640 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 1195579 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 1195518 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 1195457 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 1195396 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 1195335 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 1195274 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 1195213 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 1195152 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 1195090 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 1195029 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 1194968 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 1194907 27 100.0 34 ........................... CTTTGGCCATCTTCGGTCTTAAACTTAGCTAAAA 1194846 27 100.0 34 ........................... CGGGTAAACAAGTCAGAGTTACTCGCAGCAAATA 1194785 27 100.0 34 ........................... TTAGGCGAAACCCCGAGAGCAATTTCAAGCACGA 1194724 27 100.0 34 ........................... TAAAACGTTGAAGCTTATTGTCCGCTTTAACGTA 1194663 27 100.0 34 ........................... TGGGTACCGAGGGTGGCAATATCTTCCTTATTTA 1194602 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 1194541 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 1194480 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 1194419 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 1194358 27 100.0 34 ........................... TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA 1194297 27 100.0 34 ........................... TATATGCGACTTATTTCTTACGATGAGATTCCAA 1194236 27 92.6 34 ...........A.A............. TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 1194175 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 32 27 98.8 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : TGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAAT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.10,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //