Array 1 178244-178664 **** Predicted by CRISPRDetect 2.4 *** >NZ_AYPY01000024.1 Rhodobacter capsulatus YW1 seq0024, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ========================================= ================== 178244 25 96.0 41 ....A.................... TGAGATCGCTGAGCTGGGTTAGGTCGAGCACGAGACTTTTC 178310 25 88.0 41 ..........T...T.....T.... TCAGATCGCGGACTCGGGTTTGGCCGAGCGCGAGGATTTCC 178376 25 92.0 41 ..G.....T................ AGAGATCGCTCACTTCGGTTTGGTCAAGCCAGAGACTTTTC 178442 25 96.0 41 ...........C............. AAAGATCGCTTACGGCAGTTCCATATAACACGAGTTCTGAC 178508 25 100.0 41 ......................... TCAGGTTGCGGATGTCGGTTTGGTCGAGCAAGAGGCTTTCG 178574 25 100.0 41 ......................... AGAGATCGCGGGTTGCGGTCTGATCGAGACTGAGGACCCTC 178640 25 84.0 0 .......C...C........T..C. | ========== ====== ====== ====== ========================= ========================================= ================== 7 25 93.7 41 AGCGCGGTCAGTCCGGCCAGCGGGG # Left flank : TCCTCGCATCGGCTTCTTGCCGCGCGATCAGGGACAGCACCTCGCCCACCTCGGCCATGATCTGCAAGACCGGGACAAGTTCATTGCCGTTCGTGGCCGGAACCTCCCGCAAGGCGGTGGCGATCTGTTCGGCAAAGACCGCGGCCGAGATGCGGGTCACCTGCGCATGGCGCAGAAGCGCCCGGATTTGCGTTTCGGCGGTGCGAATGGCGGGCGGCGCGGGGGGAGCCGCACCGATCCACTCGGGCGGTTTGCCGTCGGGGCGGGCCTTGGGGAGATAGGGCTCAGGCCAAGGCGGCAGGGTGTTCAGATAGGCGAGGGTTTCGCGGGTGCGGGTTTTGCCATCCTCGATCTCTGCCAGTTGTGCCAATTCCGCATCGGCACAGGTGGCGGGGGTGTTGGTGAAGTGCAGGCCGCCCACCAAGTGCGTGCCCAGTTTGAACAGCCCCCGGATAGGTCGCAGATCGGCGACCGCGCTGCTGTCAAGCCCGAGGGTTTCC # Right flank : GTCAGGTCGCTTACGGCAGTTCGGTTGAGGTTGAGCCGTTGAAGCCCCGTCAATCCCGCCACTTCGGTTGGGATGCGGTCTAGCGCGCGGAAAGCATCCTCCGAGAGCCAAAGCTCTGTCCCCCCCTCCCGCTTCACCCGCTCGATTTCTTCCAGCGCCGCCCTGTAGGCCTTCTCTGCCTCGGTCATCTTCACCCCTCACACTCCACCCAGCTTACCCGACCGCCCCCGTCAAACAACTGCGCTTTCCCGCTTGACGCCCTCGGCCGCAGCCGGTAGTGAACGCCCATCGCGCGGTTGTAGCTCAGTTGGTTAGAGTACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGCCCCGTCAACCGCGCCACTTTCCCCTCCCTCTGGACGCTTGCCGCTTCGTGGCGTATCACGCGGCCATACGGAGGATGTCTGATGCGCGACGAGCTGGATGCGAAAACCCTGATCGACACCATGGGCCAGGCGGCCCGGACCGCGGCG # Questionable array : NO Score: 2.51 # Score Detail : 1:0, 2:0, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGCGCGGTCAGTCCGGCCAGCGGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //