Array 1 35993-36560 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAJCUY010000031.1 Lactiplantibacillus plantarum strain R35 R35_1.clean_(paired)_contig_31, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     35993	    36	 100.0	    30	....................................	ATGTCAAGGATTGGAACAGTTTGCCGACGT	
     36059	    36	 100.0	    30	....................................	GATGGTGCTGTTGCACGTGATCCCGCGCTT	
     36125	    36	 100.0	    30	....................................	CAACTTGTTGCTTGATAAACCAGTCCAAAC	
     36191	    36	 100.0	    30	....................................	CTTGAAGAAGTTAAGGCACAAACTCCAACG	
     36257	    36	 100.0	    30	....................................	TAACACGTCTAAAAGCGATAAACGAGAATA	
     36323	    36	 100.0	    30	....................................	TGTCACTAGCGGAGTCAATGGATCGTATTA	
     36389	    36	 100.0	    30	....................................	TCAGACCTGAACGTTTACAACCTATTTACG	
     36455	    36	 100.0	    30	....................................	GATGCTGAGGAAACGAAGCATAGAACGTTT	
     36521	    36	  83.3	     0	...........CG.C..C.........T..C.....	|                             	AA,C,T [36542,36555,36558]
==========	======	======	======	====================================	==============================	==================
         9	    36	  98.1	    30	GTCTTGAATAGTAGTCATATCAAACAGGTTTAGAAC	                              	       

# Left flank :   CAGTCGATTTGAACCGCCTTTTTCTAAAGAAAGTGCAGACCCAAATTATCAAGTTAATGGCTGATGATCGGCAAGTAGCGGTCTTAGATGAAAATCGTAAAGTAGTTTCGCAAGTAATGGAAGCCAGCTTCTTACTAGACTTACCGCTAGATGTTGACGAATCGCCTAGCCTAGAACAAATATTGAAGTTTACCGGTATTCACTTTCCAACGGCGCTTATGAATGACCCAAGGGCAATACTGGAGGCACTTGTGCAAACGCATGTTGAACTAGGTTTGAAACAGAAGCTGGTGTTGACTAATGTCAGCCATTACTTAAATCAAAAACAATGGGCGAGCTTTGAGCAACTAGTGCATGATTTGGGCGCAACTGTCATTGTTATCGAATACTCAGAAATAAATCGAATGGAAAAGTTCAAAAATAGTTGTTATTATTATGTTGACGAGGATTTAGTAAACTGGCGTGATATGAATTAATGAGTAAATGATGTTAAAATGCTG
# Right flank :  CTAAAAAATGGCTCACCAACTAAAACAGGTTGGTGAGCCATTTCTATTTATTAACTAATTACTAATCAATCACGCCATCTTTTCCCATCCATCGGAACCGAATAGACTTCCCGACCTCGGTCACAATCAAGACGACGATCCCACAGATAATCGGGATGCCCCAACCATACCAGAAGTTGATGCTAGTCGTATGGAAGACGGATTGCATGAATGGTAGGTAAATGATTCCCAGTTGTAAGAGAATCAGGATACCAATGATGTAGAACGCCATCTTATTTTGGAAGAAGTACTTGGAAATGACGGGGTGGTCATTTCGCAAGTTGAAGAGGTAGAAAATCTTACCAAAGATGATGATGTTCAGTGACATGGTACTACCGACGACGTTTGGTAACCCAAGCGCGGTCAAGTAGTCATAGGCGAAGATCCCCAATCCAGAAATTAGGAAGGAGACATAGCCGATTTCAAAGTAATCTAATTTTGACAACAACCCAGACTTAACA

# Questionable array : NO	 Score: 3.26
# 	Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTTGAATAGTAGTCATATCAAACAGGTTTAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,-0.20] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.27,0   Confidence: MEDIUM] 

# Array family : NA
//