Array 1 52210-51724 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS570650.1 Streptomyces clavuligerus strain ATCC 27064 supercont1.27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 52209 29 100.0 36 ............................. ACCCACGCCGAGTCGGGAGCGTCCTGGCGCAGTGTG 52144 29 96.6 35 ..................A.......... GAGATGGCCCAGTCGCCTTCTGCGGAGACGTGGAG 52080 29 100.0 35 ............................. GTGATCCGGGCAGCGGGGTAGCCGAGAGCGCGCGC 52016 29 100.0 35 ............................. AGGGTGAACGCCATGGGATGGCGTCGCCCGTCAAG 51952 29 100.0 38 ............................. CGGTGGGTGAGCTGGACGTGGAGGCCGAGGGCCTGGGT 51885 29 100.0 35 ............................. GACCCCTCCCCCGCCCCTTCCCGGGGCCCTCCCCA 51821 29 96.6 40 ..........A.................. TCGCCGACGACGGCCAGGGGCTGGCCGAGCCAGTGCGCGC 51752 29 75.9 0 ..............CC.CA..C..C..C. | ========== ====== ====== ====== ============================= ======================================== ================== 8 29 96.1 36 GTCGTCATCAGCCCTGGTGGGTTCGCAAC # Left flank : GAGGAGCTGGCGACGACCGTTTACCACCGCTCCCTCAAGCGGAAGGTGAGCTACGAGGAGCTGATCCACCTGGAGGCCCTGAAGATCGTCCGCCTGTGTCTTGAGGGCCAGCCATACAAGCCGTTCCGGCCGTGGTGGTGAGGGGTTGTGTTCGTGATCCTCATCTATGACACGGCAGTGGAACGCAACCCCAGGGTGCTGAAGACCTGCCGGAAGTATCTGCACTGGACGCAGCGCAGCGTCTTCCAGGGCGAGCTGTCGGCGGCGCAGTACCGGGCGCTGATGGCCGCGCTCAGCGGTGCGATCGATCCGGGGTACGACAGCATCAGGACCTATACCGTGCGGTCTCCGGAGATGGTCGAGACGGATACGCTGGGCGTGGACCTCGGGGGGCCGGGGGACATCATCTGACCTGGGCGGATGCAGTACCGGCGGGTCGCCGCAGAAGCCGCCTCCAGCGAGGCTCGCGGATGGCCTCTGAGCTGCGATTTTACTCTCGG # Right flank : CCCACCTGACAGAACGCCAATTCAGTCAACCTTCCCCCCACCCCAAGTCATTCTTTGCCGCTTCATAGCCTTCGCAAGGTTTTCGCTTGACCCTGTGCGGAAGGCGGGCCGCCCTCGGGCCCGTACAGATGATCCTCGCGGGTCACGCCTGACCCGTGAGGCCGGTGAGCAATGCTCATGGCCGAAGGAGCCTCGGCATGATCCGTTTTTCCAGGACGCTTTCCTCACCTTGGTCCGCCGCAGCGGTCGGCGCGGCCGTTCTGTTCGGTGTGGCGGCGCCCGCGCCCGCGGCCCACGCCGCGCCGCTCGCGTGTGGGCAGACCGTCACGGTCAGCGTCGTGCTCAGCGCGAATCTGCTCAACTGTCCCGGTGACGGTCTGATCGTCGGGGGCAACGGCATCACCATCGATCTCAACGGGCGTACCGTCGACGGCGTCGGGCTTGGGGTCGGTATCCGGAACAACGGGTTCGACAACGTCACGGTCACCAACAGCGGCAGC # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCATCAGCCCTGGTGGGTTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.60,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 61727-61304 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS570650.1 Streptomyces clavuligerus strain ATCC 27064 supercont1.27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 61726 29 100.0 37 ............................. CAAGGCCGACCCGATCGCGGACGAGCTTGACCGGCTG 61660 29 100.0 36 ............................. GCGTCGGCCTCATCGAGCCAGCGTCGGGTCTCCGCC 61595 29 100.0 36 ............................. ATGTGATTGCGTGGGACGGTGACCGTGCCGGTGCGG 61530 29 89.7 37 ..............C..G...G....... ATGACCATGCGGACGGCGGCGACCATGGCGTCGGGGC 61464 29 93.1 36 ..T.C........................ AGTGGCTGGTGACCCGCGTGCAGATGGCTGATCTCA 61399 29 93.1 36 ........T................T... GGCCTGGAGAAGGAAGCAGGGACGGATCGCCTTGCC T [61388] 61333 29 93.1 0 .................G..A........ | C [61319] ========== ====== ====== ====== ============================= ===================================== ================== 7 29 95.6 36 GTCGTCATCAGCCCTGGTGGGTTCGCAAC # Left flank : ATGCCCAATTTCGATGTGATTTTGAAGCGTATGGGACCCCCTGCGCGCCGATAGGACACTGGGAACAGAAGGGACGAGTAGGGCGCAGGCATAACGACTGCACAACACCCGGTACCGGAGACGCCAAAAGCGCTGCGGGAATCGCACCTGCCTGCGATTATCGGTTCGCTTCACCGAACCTCCACATCGTGCCACGGAGGTGAAGCAACCGGGGCAAGGCGTCTGGAGCCCTATCCTTGTCCCCGGCAAGGTCACGGACCCATGGGCTCCGGGCACCATGGCCACACCATCGGCCCCCGTAGCTCAGTGGATAGAGCAGGCGCCTTCTAAGCGCTTGGCCGCAGGTTCGAGTCCTGCCGGGGGCGCACATCGCCCGATCATGTAGACCTCCCCCCGGAGGGCCGCCCGTGACACTTGGCGGGCACCTCTGGCCTCGGCGGGTGCATTACCGTCGGGTCGCTGCGGGAGTGGCTGGCCGAATGCTCCGCGTACGTCATCCC # Right flank : ATCCGTTCGGCCTGACCGGCGACTGCCCAATTCCCCCCTCCGTCAACGCGGACCCGGGATACAGCGACGGAGAGCATCAGGACCGTCTGCGCCCCGCCCCCTGTCAGGCAGGCCGGTGAGGATGATGCAGATTGCGGTGACCCCAGCGCTCACGTTCAACAGCCACGCATCAGACTTAGCCGCTTTCGCGGCAGCCCGGCCATTCACGTACACCACCAAGAGCCCCGCACCGCAAAAAATATGATTACTTCGTCGGCCAAATTTAGCCAGCGCGCATGCGCCGATGCAGCCCATTGATCTCCCCTACGGTCAGCCCCTCTCGGATGGAGTTGTAGTTCAGCTCTTTCCGAGCAAGACCGTTGGCATACGAGCGCCACGAATAATCGACCCGTTCAGCGCAGGGCCACTGGACAGGTGAGGCCGTCGGCCCTCACAGCCGACGGCCTCGCCCTCAACCCAACAGGGCTGATAACGAAAAACCTAACTGCAACTCCACCATT # Questionable array : NO Score: 2.89 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCATCAGCCCTGGTGGGTTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.60,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 36283-36132 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS570647.1 Streptomyces clavuligerus strain ATCC 27064 supercont1.24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 36282 29 96.6 32 ............................T ACATCGGGGACTGCTTCGGATCGGACGCGTAG 36221 29 100.0 32 ............................. GGGTGAGCCACCACAGGAGGACGGATGCCCGA 36160 29 86.2 0 .....................G..ACT.. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 94.3 32 ATCCGCCCCGCCCGCGCGGGGATCGTCCG # Left flank : GGGCAGCCCTCACCGCCCGCGAAAACCAGAACACTGACCTCGACCTCGTCGAATACCCCACCGTCGACACCGCGCCCGAGGACGCCTGGGACCGGGCGGCCGTGCGCGCCGACGCCGAGACCGACCCTGGCCTCGTCCTCGCCTACGCCCGCCACGCGGGCCACGACCAGGCGGTCGCTCTCTACGGAACCCGAGCCGCTCGCATCCTCCACGCCGCCCTCGAAGACCACCGGGCAGGCATCCCCGGCCAGGCGGGGTTCCACTGAACCGGCAGCGGACCCGGCCGACTCCACCGCAGCCCGAGCCGGGGCAAGTCGCCTTCCGGACACCGGAATCGACCCAGACAACCCCACGACGACCACACCGCCCGATACCGTTGAACACCCAGCCCCCGCCCAGCCCAGCCCCGGGCCAACAGATCACCGGACCAACGGAGCCCCAGCCGAATGCAGGTAAACGAAAACAGCATGATCACGTGACAACGCCCCAGGTCACGAAGT # Right flank : GCAGCGGCGATCCGGCTCTCGTCCGGAGCCATGCACGAGTCGCCAGACATGATGCGGCCATCACTCTCTGCGGAACCACCGCCGAACGCATCACCCAGGTTGCTCTCGAGGACGACCTCGCGTCTTCCCCGGGCGGGGTTTCACTGAGCGGGAGTGGCTCGGTCCCGGGGTCTGTTCCGGCACCGGCCTGGCGGGCCGGGGCTGCGGAAGTAGCACGTTCGTGTACGGGAGTTGACGGAACGGACCGTACGACTGGGCGCCGGGGGTAGAGTACCGGTGCGCTTCGTGGCGCCTCCCCTCAACGATTCGCGTCCGGGCCCCCGCCCTCGGGGCCGGCCCGAACCCAAAAGAAGGTCACCAGCCGGGAACCACTGGTGACTGTTCTGAGGGGAGGCGCCCATGGGGCGTCGCGGAAAGCCCAAACCGACCTTGCGGCAGCGCATCGAAGACCTACTGGTCCGAGCAGCGCGGAAGCTGGGGAGGTGGCTCAAGGGCTGACC # Questionable array : NO Score: 3.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCCGCCCCGCCCGCGCGGGGATCGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [2,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCGCCCCGCCCGCGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.30,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 37192-36976 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS570647.1 Streptomyces clavuligerus strain ATCC 27064 supercont1.24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================= ================== 37191 30 86.7 31 .C.......................C..AC CTCAGCAGGCATGAGCACGAGGTGTTCATCA 37130 30 100.0 33 .............................. GGCGCCCCCCGGCGACGGTAAAGACGCTGCGGT 37067 30 86.7 31 C..T.................A.......A TCACCGTGGACGGAGCCCCGTTCCCGTGGCT 37006 30 76.7 0 G..T.................TG..C..TG | A [36982] ========== ====== ====== ====== ============================== ================================= ================== 4 30 87.5 32 ATCCGCCCCGCCCGCGCGGGGGTCGTTCGT # Left flank : GTGCCGAACGTGGATTTCCAGGCCGCCCGAGCAGCATTCACCGCCCGCAGGAACCAGACTGCCGGACCGACCCTGGTCGAGTACCCCACCGTCGACACCGCGCCCGAGGACGTCTGGGACCGGGCGGCCGTACGCGCCGACGCCGAGGCCGACCCGGGCCTCGTCCTCGCCTACGCCCGCCATGCGGGCCACGACCAGGCGGTCGCTCTCTACGGAACCACCGCCACCCGCATCCTCCACGCCGTCCTCGAAGACCACCGCGCGGGCTTCCCCGGCCGGGCACCGCCCCGCTGAACCGGCAGCGGGCCCGGCCGACTCCACCGCAGCCCGAGCCGGGGCAAGTCGCCTTCCGGACACCGGAATCGACCCAGACAACCCCACGACGACCACACCGCCCGATACCGTTGAACCTCAGCCCAGCCCCGGACCAACGGAACACCAGCCGAATGCAGGTAAACGAAAACAGCAAGATCACCTGACAACACCCCAGGTCACGAAGT # Right flank : GCTCCAGCGTGCCGGTGACCACATCAGCACGGCTGACCGCAGGACGGCGGCGCCCCGACCAGGCCCACCGGGTCACCGCCAGCACTCCTCCGCCACGACCGCCAGACACAGCAGCACCTCGAACAGCACGGACCCAACCCCGGACAGGCCGAGCGTGAGGCGACCGTGCCGAACCCCGAGTTCCAGGCCGCACGGGCAGCCCTCACCGCCCGCGAAAACCAGAACACTGACCTCGACCTCGTCGAATACCCCACCGTCGACACCGCGCCCGAGGACGCCTGGGACCGGGCGGCCGTGCGCGCCGACGCCGAGACCGACCCTGGCCTCGTCCTCGCCTACGCCCGCCACGCGGGCCACGACCAGGCGGTCGCTCTCTACGGAACCCGAGCCGCTCGCATCCTCCACGCCGCCCTCGAAGACCACCGGGCAGGCATCCCCGGCCAGGCGGGGTTCCACTGAACCGGCAGCGGACCCGGCCGACTCCACCGCAGCCCGAGCCG # Questionable array : NO Score: 3.43 # Score Detail : 1:0, 2:3, 3:0, 4:0.38, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCCGCCCCGCCCGCGCGGGGGTCGTTCGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGGGCGGGGGTGGTTCCG with 87% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.40,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 43017-43227 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS570647.1 Streptomyces clavuligerus strain ATCC 27064 supercont1.24, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 43017 28 92.9 33 ....C........A.............. GTCCTCGCGCCGAAGGCGGGGAAGTGGGACGCC 43078 28 100.0 33 ............................ GAGGGTGCGCAGGCGCTGGGCGGCTGCGCGGAG 43139 28 100.0 33 ............................ AAAGAAGGGCCCCTCATCTCCGCCCCCTCTCGG 43200 28 96.4 0 ......T..................... | ========== ====== ====== ====== ============================ ================================= ================== 4 28 97.3 33 GAACGACCCCCGCGCGGGCGGGGCGGAT # Left flank : CCGGTCGACGTCCCCGTTCCGCGTGAGGTACGACGCCGTGTTCTGCGGCGTGGTCCGGGCGTGCAGGGCATGGACGGCCCCGTCCCACGAGTATCTAGCGGCATCGCCGACCCAGGCGAGTACCGTGTCCTCCCCCTCCTCCAGCACGGCCAGGACGGCGGCCCCGGTCGGCTGCCCCGGGTCTGCGACCTGGCGCCCGGCGGCCGTCAGACCCGCGCGGGCGCCGTACAGGGCGCCGTATCGCACGGCGGTCCGCGCGCACAGCAGCCCGACCGTCGGCGCACCGGGCTCGTGCCCGGAGATATCGACAACACACAACCACCCCTCCGGCCGCCGGCCAGAAGACGGAGCGGCTGCCGGCACTGTTCCGTGGGTTGGTGCCCTGACGGCTGACCGCGACGACGATGACGGCCGTGGTGGTCATGGTCTCCCCTGGCGCCGGTGTGACCGCCGACCGTAGCCAGGGAGGTGTATGCACTCGACCCACAGTGTCATCGCGA # Right flank : TACTTCGTGACCTGGGGTGTTGTCACGTGATCATGCTGTTTTCATTTACCTGCATCTGGGGCTGGGGCTCCGTTGGTCCGCGGCGGGGGCTGGGTGTTCAACGGTATCGGGCGGTGTGGTGTCGTGGGGTTGTCTGGGTCGGTTCTGGTGTCCGGAAGGCGGCTTGCCCCGGCTCGACTCGATCGGGGTGTGGTGGAGTCGGCCGGGTCCGCTGCCGGTTCAGTGGAACCCCGCCTGGTGGGGGATGTCTGCCCGGTGGTCTTCGAGGGCGGCGTGGAGGATGCGGGTGGCGGTGGTTCCGCAGAGGGCGACGGCCTGGTCGTGCCCGGCGAGCTGCGCGCAGCTGCGGACGAGTGCCGGATCGGCGTGGGCGTCGGCGCGTACGGCCGCCCGGTCCCACAGGTCCTCGGGCGCTTCCTCGACAGTCGGGTGCTCGACAAGATCGAGTCCGGCAGTCTGGCTTTTCGCGGGCGGTGAATGTTGCTCGGGCGGCCTGGAAC # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAACGACCCCCGCGCGGGCGGGGCGGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.68 Confidence: LOW] # Array family : NA // Array 4 48323-48083 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS570647.1 Streptomyces clavuligerus strain ATCC 27064 supercont1.24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================ ================== 48322 27 89.3 60 A....-...............A...... TGGCTGGTGGAGTCCCCGTCGACGACGTGGACCGAGCTACCGCCGCGCCCCACCCAAAAA A,T,G [48314,48318,48320] 48232 28 100.0 33 ............................ CTCCGGGGGCGGAGGGAGATGGAGCGGATCCGG 48171 28 100.0 33 ............................ CTGGAGCAGGCCGCCCGTACCGACGTCGGCGTC 48110 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ============================================================ ================== 4 28 97.3 42 GGACGACCCCCGCGCGGGCGGGGCGGAT # Left flank : GGCTCGGGCTGCGGTGGAGTCGGCCGGGTCCGCTGCCGGTTCAGTGGAACCCCGCCTGGCCGGGGATGCCCGCGCGGTGGTCTTCGAGGGCGGCGTGGAGGATGCGAGCGGCTCGGGTTCCGTAGAGAGCGACCGCCTGGTCGTGGCCCGCGTGGCGGGCGTAGGCGAGGACGAGGCCAGGGTCGGTCTCGGCGTCGGCGCGCACGGCCGCCCGGTCCCAGGCGTCCTCGGGCGCGGTGTCGACGGTGGGGTATTCGACGAGGTCGAGGTCAGTGTTCTGGTTTTCGCGGGCGGTGAGGGCTGCCCGTGCGGCCTGGAACTCGGGGTTCGGCACGGTCGCCTCACGCTCGGCCTGTCCGGGGTTGGGTCCGTGCTGTTCGAGGTGCTGCTGTGTCTGGCGGTCGTGGCGGAGGAGTGCTGGCGGTGACCCGGTGGGCCTGGTCGGGGCGCCGCCGTCCTGCGGTCAGCCGTGCTGATGTGGTCACCGGCACGCTGGAGCC # Right flank : ACTTCGTGACCTGGGGTGTTGTCACGTGATCATGCTGTTTTCATTTACCTGCATCCGGCTGGGGCTCCGTCGGTCCGGTGCTCTGTTGGCCCGGGGCTGGGGTGGGGTTCAACGGTATCGGGCGGTGTGGTTGTTGTGGGGTGTCTGGTCGCCTTCCGGTGTCTGGAAGGCGACTTGCCCCGGCTCGGGGTGTGATGGAGTCGGCTGGGTCCGCTGTTGGTCCAGTGGGGCGGTGTCTGGGTGGGGATGCCTGCGTGGTGGTCTTCGAGGATGGCGTCGAGGACATGGTTTGTGGTGGTTCCGTAGAGGGCGACCGCTTGGTCGTGGCCTGCGTGGCGGGCGTAGGCGCGGACGAGTGCCGGGTCGGCCTCGGCATCGGCGCGTACGGTCGCCCGGTCCCACAGGTCCTCGGGCGCTCCTCGGCCATGGGGTTTTCGACGAGGGTGGGTCCGGCAGTCTGGTTCCCGCGGGCGGTGAATGCTGCTCGGGCGGCCTGGAAC # Questionable array : NO Score: 5.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:-0.59, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGACGACCCCCGCGCGGGCGGGGCGGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA // Array 5 59723-59512 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS570647.1 Streptomyces clavuligerus strain ATCC 27064 supercont1.24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 59722 28 85.7 33 ..............T.T.......G..T GTCGTGCTCGGGCTCGCTCACCGGGTCTCCTTG 59661 28 100.0 33 ............................ CGAACCCCGGTGTCTCGACGGTTGCCTGGAGCA 59600 28 100.0 33 ............................ ATCCCCAGACAGATCCGCTCGGACTCGCCCAGC 59539 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 4 28 96.4 33 GAGCGACCCCCGCGCGGGCGGGGCAGAC # Left flank : GGATATCGAGGAGGCGGTCGCTCGGGACGATGAGGCGGCCGGGGTGTTCCGGCGGGGACGGACCCGACCGCGGCGCTCTCGGCACGGCCAGCGGGTCGGCGGGCCAGAACCAGCCCCAGTCCGGGTCCGGGGACCGGCGGCCGACCGTCGGCGGGTTTGTGCCGGTCTTCAACCCGGGCCCGGCCGAGCGCCGTACTCCCCCGCCGGTCGAGGCCGGTGTCGTCGACGACGTCCAGGACGAGGAGGAGCGGGACTGGCTCGAACCCCACGACGACCCCGCCCAGCAGTTCCACCGTCTCGTCCGGCACCTGGCCGCCGACGGTGACCAGCGCGCGGCGGCGGCCGGCCGGAAGGCCCGGCGGACGCTGGCGGAGATGGCCCCCGGCCATGTCCTCCAGCCCCTCCTCACCCCCACCCCCACCTCCACCAGTCGTGGGGGTGCCCGATGACCGCGGCCCGCCCGCCGCCCGCCGTAGCTCTTTGAACGGCACGGGACACGG # Right flank : ACTTCGTGACCTGCGGCGTTGTCAGGTGATCATGCTGTTTTCGTTTACCTGCATTCGCGGCTGGTCCTTGTGTGGTGCGGTCTGGGTAGGTGCACGGTATCTGCCGGAGTGACCGTCGCGGGGGGTGTCTCTATGTCCTTCGTCAAGGATGTGGTGCCGGGTGTATAGGTGTTTGTGGTGGTTATGCGGCGAGGGCGGCGGTGGGGGTTCGGGACTCGTAGAAGGTTCCGTCGCGGAGCATGGCGAACAGGACGCTGACGCGCTGGCGGGCGAGGCGGAGGAGTGCCTGTGTGGTGCTCCTGCTTCTGGTGCGGGCCGGGTGGAGTGGTTTCGTGGTGAGTGTGAGCCGTACGCGGCCTGGAAGGCCCGTACGCCCGTACTGCTGCAGGTCTGCCGGTCGTGTCCTGCGCGGGCGGCGTGCTGCGGGCTCGCGCTGCGGGACCTGGAGGGGATGGACCTGAACCGGGGTGAGGACGACATGGTCCGCGGCGGTCTGCTGG # Questionable array : NO Score: 2.68 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGCGACCCCCGCGCGGGCGGGGCAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA //