Array 1 259409-257349 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP071732.1 Bifidobacterium saguini strain DSMZ 23967 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 259408 33 100.0 34 ................................. TCGCGAAGCAACCGTTTGATTCGTTTTGAATCAG 259341 33 100.0 35 ................................. ATATCTGGGGACGAGCCCCGGAGCGCACCGGCCTC 259273 33 100.0 33 ................................. TGCATCGAACCGCCGGCGTAGCGGCCTCGGCTT 259207 33 100.0 34 ................................. ACCGATTGCACGCGCTGCTCGGTTTCGCAGACGG 259140 33 100.0 35 ................................. CGGAGGTTGATAATGCTGTTGAACGAGTATTGGGA 259072 33 100.0 35 ................................. ACAGTCTGCACGCGCTGCTCGCGCTCGCAGACGGG 259004 33 100.0 35 ................................. TACATCGACGTGAAAAGCCCGAACGGCAAAAAAGC 258936 33 100.0 33 ................................. TGATGCAGATGTTAGCACGTGCCAATATGTTGG 258870 33 100.0 35 ................................. TATTCGCATTCCCGTGGTGGATACTCGCCATGCAT 258802 33 100.0 36 ................................. ATAGGGCCGGTGAGCTCCGTTTCCGTACCGTCCGCC 258733 33 100.0 35 ................................. TTCAGCGGCGCGGGCAGCTGGCTCGTATCCGCTGG 258665 33 100.0 35 ................................. TCCCGCGCATGCAAGCGGAACGGATCCCCCAGCCG 258597 33 100.0 35 ................................. GACACGGCGAAGAACCTGATCGTCGCGGAACCGTT 258529 33 100.0 34 ................................. CATGCATGAGGCGTTCGACAAGGCCACCAAGGCG 258462 33 100.0 33 ................................. GCCAAAATGGCCAACGGCGTGGAAACCGCATTG 258396 33 100.0 37 ................................. TTCGCCTGGCAGGGGTACGCGCACATCCCCGACGGTC 258326 33 100.0 36 ................................. TCCAACGCGGCAAGCGGCATCGGCAGCGCATTGAAA 258257 33 100.0 35 ................................. ACGTCCTTGGACTCGTCATCGCCGGAGTGCTGCTT 258189 33 100.0 33 ................................. ACCGGACTCTCCGGCGCGCTCGGAAGCCTCGCG 258123 33 100.0 34 ................................. CTATACGCCAGCGGCGTGAAGCCCTCGAAACCGG 258056 33 97.0 33 ......................T.......... CGGTCATCGTGTACCCGCAGGGCGTGTTCCCAA 257990 33 100.0 34 ................................. GCCGGTCGGGTGGATGCTTGGCCAGACGACGCTG 257923 33 100.0 36 ................................. GTCACCCAACCAACCGAGGAAACCGCACACCGAACC 257854 33 100.0 32 ................................. GCCGCAGGCAGTTGCGTCCAGTTGCGGGTCTG 257789 33 100.0 37 ................................. AACGTGCTGTCACCGGTTTCCGCGGCCTTGCCGCCGG 257719 33 100.0 34 ................................. CTGAGGGTACTGCACCATTGCCGAAGAAGCCACG 257652 33 100.0 36 ................................. TGCGGACTCCGCTGGGGCGAGGCCGCAGCATTACGC 257583 33 100.0 35 ................................. ACCGTGCGTGCGGGCCGGTTCGCGGTCAGACTCCG 257515 33 100.0 35 ................................. ATCGGCCTGGCTAATCTGGCCGGCCAATTGCAGGA 257447 33 100.0 33 ................................. ACGCAAGGTGGAATATCCTGCGTGTAGTCAACG 257381 33 93.9 0 ...........TG.................... | ========== ====== ====== ====== ================================= ===================================== ================== 31 33 99.7 35 GTCACCCTCCTCACGGAGGGTGCGGATTGAAAT # Left flank : TGAATGTGCGGTTTCGCCTTCAGGCTATTTGCAGCTTCGTCATGAGCTGAATGACATCATCGACATGGAAAGAGACAGTCTTCGTTTTTATAATCTAGGTGCGAAGTATTCAGATCGTATTGAGAATGTCGGTAAACAGCGGCATCTACCAGTTGATGATGTCATGTTGATATAAGACGGTGCGATATAATGTGCTTCGATTGGATTGGTACCGTCTCTGGGGAAGGGGATGCGCGGTGCCGCGTATGGTGCGATGTGTGAGCTGTCATAAAACTAGTAGAGGTTCGCACCGACGCTGATAAGGAATGAGGATTATTTTTCGGCGATTCGGTAATATTCCAACTTCGTTTGCGGTTTGATAACTAAAAAGTGGTTAGACAACTATCCGATATGTAGGATGCAGCGCGAGTTTAGGGTGTTCTGAAGGATGAATAGTTGATACACTGCAAGTGTCTGTGAACATATTGTCCACAATGTGGGCCGTATATTTCATGGATGCT # Right flank : GATGACGGTGCTGAACGGTTTGGAATAATCCGGTGGTTGATGATGGCGCTGACCAGTAAGGGGTCGTGTTCACCGACCGACATCGCAGGAATCAGGTGCGGTTGGCGATCACCGCCGACAGTCAGGCGCGAAGGCTCTGGGATTCCACGTTGGACTTGGATAATCTGAAGGGTTCGCAGCCGATATGGAAGAACGCGATGCTGAACCTGTTGCAGACATGGTGGCAAGGTGAGCGCCGCAACGGCTCGTTCCGAGACTCACGACAGCGCAGAAGCTCGTCGGAATATCTCAAGCGACGACGGCAGACTGTTTTCGATAACGGGATTGCAGGGCTGCTCCCCGAAGTCAAACCAACAGGGCAAAGTCCGGATATATTGGCGAATAACGTTCAGCCCCAAACGAAGAGGTCGTCAATCACGTCCTGCACGGGGAAGGCGACGGGGAGCGAGGAGGCCGTCTGTATGGTTCGAATATATTAGGCAAGACCGAGTTCCTGCAAG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCCTCCTCACGGAGGGTGCGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACCCTCCTCACGGAGGGTGCGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.50,-8.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //