Array 1 28936-29265 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI259641.1 Prevotella sp. F0091 Scaffold852, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ===================================== ================== 28936 38 100.0 37 ...................................... ATCGCATGATAAGCGAGGAAGTCGACACTGATGGGAA 29011 38 100.0 36 ...................................... GGAAAGAACGCTAAAAGAAAGAAGTTGTAGTATTAC 29085 38 100.0 34 ...................................... ACAATTTTTCAGTTACAGGTTACATCTGCAAAGA 29157 38 100.0 33 ...................................... TTACAACGTAAGTATGAAATCTTACTATACTGT 29228 38 100.0 0 ...................................... | ========== ====== ====== ====== ====================================== ===================================== ================== 5 38 100.0 35 GTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCCTTGTTCTAATGGAAGATACTCTCGGAGCATAAGAGCACTGTCTAATCTCTACTTTACTTCACGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGCTTGTAAACATTTACCCATCGTTCTTTAACAAGAGGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGCTAAGGTAGAACTTTGGAGCCGTAATTCTCATGGGTCTTAATCCTTGTTCTAATGGAAGATACTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCCTTGTTCTAATGGAAGATACTCTCGGAGCGCACTAACTTTCCTCGATACTCTACGCACACTGCG # Right flank : CTTGATAAGTCAGGTAACCCTGTGATTCGCAGTACTATTTGTCTTAATCCTTGTTCTAATGGAAGATACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCCTTGTTCTAATGGAAGATACTCTCGGAGAACTCATCAAGAATGGTGCTAAGTCAGTAAAAGGGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGCATATTATGACAAGTATTAGAGAATCTCTTTCAAGAGGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGCGCATAACATTCAGTATTATTAATAGTACTTTAAGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGCAGTATGATTAAAGTTTGCGTATGCTTAGTTGTAGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGCGATTTCCCGAA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 2 29500-29753 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI259641.1 Prevotella sp. F0091 Scaffold852, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ==================================== ================== 29500 38 100.0 36 ...................................... ATATTATGACAAGTATTAGAGAATCTCTTTCAAGAG 29574 38 100.0 33 ...................................... GCATAACATTCAGTATTATTAATAGTACTTTAA 29645 38 100.0 33 ...................................... AGTATGATTAAAGTTTGCGTATGCTTAGTTGTA 29716 38 100.0 0 ...................................... | ========== ====== ====== ====== ====================================== ==================================== ================== 4 38 100.0 34 GTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGC # Left flank : ACTGATGGGAAGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGCGGAAAGAACGCTAAAAGAAAGAAGTTGTAGTATTACGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGCACAATTTTTCAGTTACAGGTTACATCTGCAAAGAGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGCTTACAACGTAAGTATGAAATCTTACTATACTGTGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGCTTGATAAGTCAGGTAACCCTGTGATTCGCAGTACTATTTGTCTTAATCCTTGTTCTAATGGAAGATACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCCTTGTTCTAATGGAAGATACTCTCGGAGAACTCATCAAGAATGGTGCTAAGTCAGTAAAAGG # Right flank : CGATTTCCCGAAATAATTATAAATTCATAAACAACAAAGTCTTAATCCTTGTTCTAATGGAAGATACTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTTGTTCTAATGGAAGATACTCTCGGAGCTTGTAAAAACTATGAAGGAGAAGTTTTAGGCGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGCCCTTCTCCTTCTTAGCAGGAGTAACAGCGAAGATTTGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGCCTGGCGCATCGACTGGTGAAGAGGAAACAGAAGAGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGCCCTTCTCCTTCTTAGCAGGAGTAACAGCGAAGATTTGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGCGAATACGAGT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 3 29985-30242 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI259641.1 Prevotella sp. F0091 Scaffold852, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ==================================== ================== 29985 38 100.0 36 ...................................... CCTTCTCCTTCTTAGCAGGAGTAACAGCGAAGATTT 30059 38 100.0 34 ...................................... CTGGCGCATCGACTGGTGAAGAGGAAACAGAAGA 30131 38 100.0 36 ...................................... CCTTCTCCTTCTTAGCAGGAGTAACAGCGAAGATTT 30205 38 100.0 0 ...................................... | ========== ====== ====== ====== ====================================== ==================================== ================== 4 38 100.0 36 GTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGC # Left flank : TAAGTCAGTAAAAGGGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGCATATTATGACAAGTATTAGAGAATCTCTTTCAAGAGGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGCGCATAACATTCAGTATTATTAATAGTACTTTAAGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGCAGTATGATTAAAGTTTGCGTATGCTTAGTTGTAGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGCGATTTCCCGAAATAATTATAAATTCATAAACAACAAAGTCTTAATCCTTGTTCTAATGGAAGATACTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTTGTTCTAATGGAAGATACTCTCGGAGCTTGTAAAAACTATGAAGGAGAAGTTTTAGGC # Right flank : CGAATACGAGTCTGATGGTGTAACGATGAGCGAAGGTCTTAATCCTTGTTCTAATGGAAGATACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCCTTGTTCTAATGGAAGATACTCTCGGAGCTGTAGAGAAATACGAAAACGTGTTCTTTGAAGGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGCAAATAACTATGAATAGAAAAAGAACTTTAAGTGGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGCAAAAGAGAAATGACGGTTAGGCGTGTATTGTCTTGTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGCAGCTGGTAGCTTTGTAAACTCTACTGGCGACTATGTGTCTTAATCCTTGTTCTAATGGAAGATACTCNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTCTAATGGAAGATACTCTCGGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 2735-2490 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI259547.1 Prevotella sp. F0091 Scaffold133, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================== ================== 2734 32 100.0 38 ................................ CGGAGAATACCAGCAGCTAACATAGGAATAGCTGCAAT 2664 32 100.0 40 ................................ CGGAGTGTACGTATTAATTACTACAAGCGCTAAGAGAGTT 2592 32 100.0 39 ................................ CGGAGATCGCCTAAGAACACAGAAGGTACAGCATACGAT 2521 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================== ================== 4 32 100.0 39 GTCTTAATTCTTGTTTTAATGGAAGATACTCT # Left flank : TCGAGTCTCACTTAGGTCTTAATCCTTGTTTTAATGGAAGATACTCTCGGAGCATCTGCAAAGACGCAGACGTTAAAAACTTCGAGTCTTAATCCTTGTTTTAATGGAAGATACTCTCGGAGGCATTGCAAACAACTAAAGTACTTGATAATATCTGTCTTAATCCTTGTTTTAATGGAAGATACTCTCGGAGATTAAAAGAAATTCTTTTAGAAGAAGATGCTAGGAATGTCTTAATCCTTGTTTTAATGGAAGATACTCTCGGAGAGCATTTCAGAAGTACCATTTTTAAAGTAAAAATTAGTCTTAATCCTTGTTTTAATGGAAGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATTCTTGTTTTAATGGAAGATACTCTCGGAGTTTGTGCTGCAAATTATGAAAAGAATGTTGTTGAAC # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATCCTTGTTTTAATGGAAGATACTCTCGGAGCCAACAGAAATTACCATTTTTAGTAGCCGTAGATTTGTGTCTTAATTCTTGTTTTAATGGAAGATACTCTCGGAGCATTGCCACAAAGGTTACAGCTTGTATCAGGGATAAGTCTTAATTCTTGTTTTAATGGAAGATACTCTCGGAGCAGAGTGCGATATATGGCAAGTAAAAGTAGTTCGTACTCGTCTTAATTCTTGTTTTAATGGAAGATACTCTCGGAGAGCTAAGACTTATATTTCTTTGTTTATCGCTGTTTGAAGTGTATTTACTTTTGGCAGAACGCTTTAGTTAACATAAATTAACCACTTTGTTTGCGACTGCAAAGGTACAAATAATTATTCAAAATTTCAAAGATCGATGCGTT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATTCTTGTTTTAATGGAAGATACTCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.88%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 3220-2968 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI259547.1 Prevotella sp. F0091 Scaffold133, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 3219 37 100.0 33 ..................................... CATCTGCAAAGACGCAGACGTTAAAAACTTCGA 3149 37 100.0 34 ..................................... GCATTGCAAACAACTAAAGTACTTGATAATATCT 3078 37 100.0 37 ..................................... ATTAAAAGAAATTCTTTTAGAAGAAGATGCTAGGAAT 3004 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 4 37 100.0 35 GTCTTAATCCTTGTTTTAATGGAAGATACTCTCGGAG # Left flank : NNNNNNNNNNNNNNNNATCCTTGTTTTAATGGAAGATACTCTCGGAGTTTTTCAGTTACAGGTTACATCTGCAAAGACGTAGAGTCTTAATCCTTGTTTTAATGGAAGATACTCTCGGAGGTAACAAGACAGAGGGACTTGTTCAGTATAATGTTGTGCGGTCTTAATCCTTGTTTTAATGGAAGATACTCTCGGAGACAGACTATATTGAAGACTCTGATTATAACGATGGTCTTAATCCTTGTTTTAATGGAAGATACTCTCGGAGCTATCGGCATAGCAAGTAAGGAGAACAGAAACGGGTCTTAATCCTTGTTTTAATGGAAGATACTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCCTTGTTTTAATGGAAGATACTCTCGGAGCAAAACAGGTTACGTGAGTTCGAGTCTCACTTAG # Right flank : AGCATTTCAGAAGTACCATTTTTAAAGTAAAAATTAGTCTTAATCCTTGTTTTAATGGAAGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATTCTTGTTTTAATGGAAGATACTCTCGGAGTTTGTGCTGCAAATTATGAAAAGAATGTTGTTGAACGTCTTAATTCTTGTTTTAATGGAAGATACTCTCGGAGAATACCAGCAGCTAACATAGGAATAGCTGCAATGTCTTAATTCTTGTTTTAATGGAAGATACTCTCGGAGTGTACGTATTAATTACTACAAGCGCTAAGAGAGTTGTCTTAATTCTTGTTTTAATGGAAGATACTCTCGGAGATCGCCTAAGAACACAGAAGGTACAGCATACGATGTCTTAATTCTTGTTTTAATGGAAGATACTCTNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTTTAATGGAAGATACTCTCGGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 3 3452-3637 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI259547.1 Prevotella sp. F0091 Scaffold133, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ======================================= ================== 3452 38 100.0 33 ...................................... ATCGTTATAATCAGAGTCTTCAATATAGTCTGT 3523 38 100.0 39 ...................................... GCACAACATTATACTGAACAAGTCCCTCTGTCTTGTTAC 3600 38 97.4 0 .....................................T | ========== ====== ====== ====== ====================================== ======================================= ================== 3 38 99.1 36 CTCCGAGAGTATCTTCCATTAAAACAAGGATTAAGACC # Left flank : GTACTTCTGAAATGCTCTCCGAGAGTATCTTCCATTAAAACAAGGATTAAGACATTCCTAGCATCTTCTTCTAAAAGAATTTCTTTTAATCTCCGAGAGTATCTTCCATTAAAACAAGGATTAAGACAGATATTATCAAGTACTTTAGTTGTTTGCAATGCCTCCGAGAGTATCTTCCATTAAAACAAGGATTAAGACTCGAAGTTTTTAACGTCTGCGTCTTTGCAGATGCTCCGAGAGTATCTTCCATTAAAACAAGGATTAAGACCTAAGTGAGACTCGAACTCACGTAACCTGTTTTGCTCCGAGAGTATCTTCCATTAAAACAAGGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGTATCTTCCATTAAAACAAGGATTAAGACCCGTTTCTGTTCTCCTTACTTGCTATGCCGATAG # Right flank : TCTACGTCTTTGCAGATGTAACCTGTAACTGAAAAACTCCGAGAGTATCTTCCATTAAAACAAGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGTATCTTCCATTAAAACAAGGATTAAGACATACCAGCCTGCCCATAAATCATCATCTTTATTGGGTTCTGTGTGTCCTATTACATAGGGAAACTTACTTCATCACTCTGCATTTCGAAAGAGCCCAAAAGTATCTATACCATTTAGCCGATTTCGTTTTACAGAATTACCCCAAACTTGATTTCCTGTCATTCCTGTCATTTGTAGTAGGTTATTAACTTACTATATTACAGTAAGATAAATTAAATGTTAAACGTGACAGCAAAACGGAAATAAAACTTTCTGTTGTTTTATGTAACAAATATCTTTCTTCTTTGGGAATACTTATTAC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCCGAGAGTATCTTCCATTAAAACAAGGATTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.53%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 1-611 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI259651.1 Prevotella sp. F0091 Scaffold997, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================================= ============================================================================= ================== 1 32 82.1 38 -------................................ TCATCTACTACTATATACCAATCATTAGGAGTTGTACG 71 39 100.0 38 ....................................... GGCTGTCCGTGATGCTCTTATCAATGCTCCGTTGTACG 148 39 100.0 38 ....................................... GGGCGTTAGCCTTACTCCGACATTGATACAGTTGTACG 225 39 59.0 77 .......................NNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 341 39 82.1 39 NNNNNNN................................ TCCGTATGCTAATACTACTATTGGTGTCTCTGTTGTACG 419 39 100.0 38 ....................................... TCTTCAGCTGTATCTACTGCTGCTAATTATGTTGTACA 496 39 100.0 38 ....................................... CACGTGCCTTTAACGTTCCCGACCCTAACTGTTGTACG 573 39 61.5 0 ........................NNNNNNNNNNNNNNN | ========== ====== ====== ====== ======================================= ============================================================================= ================== 8 39 85.6 44 TGCTAATGCAAAGATACACATTTTGAAGCAATTCACAAC # Left flank : | # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGATACACATTTTGAAGCAATTCACAACAGCCTGCAAACGCTTCATTTCTTCATAGATGTTGTACGTGCTAATGCAAAGATACACATTTTAAGCAATTCACAACTCTTCAGCTGTATCTACTGCTGCTAATTATGTTGTACATGCTAATGCAAAGATACACATTTTGAAGCAATTCACAACTGAGGTCTGCTTCGCTTATCCTTGCAAAAGTTGTACGTGCTAATGCAAAGATACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAAAGATACACATTTTGAAGCAATTCACAACGTCTACGATGTGAGTAACGCCACCGTTAAGGTTGTACGTGCTAAT # Questionable array : NO Score: 5.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.28, 5:0, 6:0.25, 7:-0.47, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGCTAATGCAAAGATACACATTTTGAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 2 1528-1096 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI259651.1 Prevotella sp. F0091 Scaffold997, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================================ ============================= ================== 1527 48 97.9 28 G............................................... GTCGAATGATATAGAAAGAGGTTTCAAC 1451 48 100.0 29 ................................................ AAGTCCAGGATTGATATAGAAATGAACTT 1374 48 97.9 29 G............................................... AGCATCGAAGTAGACAGTCCTGCACTTTG 1297 48 100.0 29 ................................................ CCAGTTGACAGATTTTTGCACTAACAATG 1220 48 100.0 29 ................................................ CCAACCCAAGCGACCTGCAACACGATAAA 1143 48 100.0 0 ................................................ | ========== ====== ====== ====== ================================================ ============================= ================== 6 48 99.3 29 CGTTGTGAATTGCTTCAAAATGTGTATCTTTGCATTAGCACGTACAAC # Left flank : NNNNNNNNNNNNNNNNNAAAATGTGTATCTTTGCATTAGCACGTACAACGGCGTGACGAAGTTTCGCCTTTTCGTATGGGTTGTGAATTGCTTCAAAATGTGTATCTTTGCATTAGCACGTACAACAGATGCAAGCTATCCATGAATGACGCTATCGTTGTGAATTGCTTCAAAATGTGTATCTTTGCATTAGCACGTACAACCTTGTACTTTAGCTTAGAGTAAGTGGGAACGTTGTGAATTGCTTCAAAATGTGTATCTTTGCATTAGCACGTACAACCTCTTCAGTAGTCTTAATAGCACCAGCAATGTTGTGAATTGCTTCAAAATGTGTATCTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATGTGTATCTTTGCATTAGCACGTACAACTTAGTTTCAGCACTCATTTTATTAAATT # Right flank : CTTAACGGTGGCGTTACTCACATCGTAGACGTTGTGAATTGCTTCAAAATGTGTATCTTTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATCTTTGCATTAGCACGTACAACTTTTGCAAGGATAAGCGAAGCAGACCTCAGTTGTGAATTGCTTCAAAATGTGTATCTTTGCATTAGCATGTACAACATAATTAGCAGCAGTAGATACAGCTGAAGAGTTGTGAATTGCTTAAAATGTGTATCTTTGCATTAGCACGTACAACATCTATGAAGAAATGAAGCGTTTGCAGGCTGTTGTGAATTGCTTCAAAATGTGTATCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:-0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGTTGTGAATTGCTTCAAAATGTGTATCTTTGCATTAGCACGTACAAC # Alternate repeat : GGTTGTGAATTGCTTCAAAATGTGTATCTTTGCATTAGCACGTACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.50%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA //