Array 1 191806-190649 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMXZ01000001.1 Streptococcus salivarius strain BIOML-A20 scaffold1_size521871, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 191805 36 100.0 30 .................................... CTAAAATCGTTAGGGAAATTAACCAGATTG 191739 36 100.0 31 .................................... CCAGTCATCCCAGATAATAATTGGTTGTCCG 191672 36 100.0 30 .................................... CTGATAGCGATTATTATAGTAATATCGCAG 191606 36 100.0 29 .................................... TATTTTTGTAAATTATATAACGCTAAATT 191541 36 100.0 30 .................................... GTGGTAGAGGAGCTCGTGGGCAAAGAACAC 191475 36 100.0 30 .................................... TTTATTTTGTTGCTATATAAACATGCTACT 191409 36 100.0 30 .................................... TAGATTATTAATTTAATCTATAAGGCTCAT 191343 36 100.0 30 .................................... AATATGGTACAACTCCGAAGCAAATAACTT 191277 36 100.0 30 .................................... TATTCTGTTATTTCAATTTCTTTCAGTACC 191211 36 100.0 30 .................................... TGATACGTACCTTTGCTTAGTGTGGTCTCA 191145 36 100.0 30 .................................... GAGGTTAGAAGGTATCATTTCTGACGAGCT 191079 36 100.0 30 .................................... TCCACGCATCAAAAAGTTCACGCGGTAAGG 191013 36 100.0 30 .................................... AAAATCAACGGTTTAGGCTTATCTACGTTG 190947 36 100.0 29 .................................... CCGTGTCCATGCTCCATACGCACTTGAGT 190882 36 100.0 30 .................................... TAAGTTGTCCTTCGAATATGTAAGTGATCT 190816 36 100.0 30 .................................... AAAATTGTGAACAAGCCGTCGTCTGACTTG 190750 36 100.0 30 .................................... AGAATTTGGTGAAATAAGCGAAGTATATGC 190684 36 94.4 0 ..................................GG | ========== ====== ====== ====== ==================================== =============================== ================== 18 36 99.7 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : TTGATAGTTTTATTTCAGAGGAATCTTATGGTAGTTTTTATAAGCAAATTGGTCAGCTAGTCAAAAAGTATCCAAACCTAACCTTTATTATATTTCCAAGTGACCAAGGCTATTTAAAGATTGATGAAGAGAGTAGTAGGTTCGTCAATATTTTATCTGATCAGGTAGAACATTTGTATGATATTGAGTTTATGTATGAAAGTGTAGCGAAACATTATCCAAGTAATAATTTTCCGACGCGAGAAGGTTTTAGGATGTCCTTAGAGACTGTGACGCCTTATTTGTTAACAAAAATGACGAGACAACCTAGTCTCTCACTCGTTGATTCAGTAATTTTGAATATCTTAAATCAGTTGTTTCACTTTAACTATTGTATAGGATATTCTCAGACACCTGATGAGGAGCTATTACATAGATATTTAGAAAGTAAGAATTGACAAGTACAGTGATTGATTCTATAATCACTATGTGGGTATAAAAACGTCAAAATTTCATTTGAG # Right flank : TTGATTGATTCAACTTAAAAAGCCAGTTCAACTGAACTTGGCTTTTTAAAATACACGATATACATAAGGATTGTCAGGCTGACCAACCTCTTTGACCTCAGTCAAATTGAGAATAGGCAGGCTCTGTTTGAGATTTTGATAGTAATCCACAGTGATGGTACCAGTGACTTTTACCCAGGTATTGTCCTTAAAGGTTTGGTCACTTCCTGTCGTCGCCAGTCCGTAAACACCTGAATCGGCGATACAGTGGATAATTCCGAAACGGAAGATGAACTGATAACCCTTGGTTTGTGGGTCATTGTAGACAAAACCGGTATAGGTGACCTTCTTGCCCACGAAATCGTTAGGATAGAGGTAGATGAGCTCCATGACTTCCATGTAATTTTCCGTGGTAATCTGGATGGTGTCACGTCCCTTGTACTTGGCGAGCTCTCTGGTCATTTCCTTCTCATAAGCTGAGGAGGTGAAGTAGGAGCTGGTGTCCGGCTTCAAGTACTGAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //