Array 1 7183-6424 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJOY01000016.1 Pseudomonas mangiferae strain DMKU BBB3-04 NODE_16_length_78475_cov_44.3985, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 7182 32 100.0 34 ................................ CATCGCCTGGGTCTACGGCCAGGGCATGCCGAAG 7116 32 100.0 34 ................................ TGCTCATCAGTGCCTGCCCACGCAGTATTGCCAC 7050 32 100.0 34 ................................ AGCAGCGAGATATCGGTCTCACTGGCGCGCACCG 6984 32 100.0 35 ................................ ACCTTCGGGGAGCCGACCCCGGTCCTCGGCGGGCG 6917 32 100.0 34 ................................ GGGGTCCACGAAACAGTGCGCCCGTTGGGATATA 6851 32 100.0 35 ................................ TGTGTAGATGCCGCCAGAAATGACGGCGCCGCCGA 6784 32 100.0 33 ................................ ATGTCGCGGCGCACATGCTCGTCGATGCCGATG 6719 32 100.0 33 ................................ ACCGTGACAGGTCACGATTTGCCTCCCGAGTGG 6654 32 100.0 35 ................................ AAGGCGTCACCGCCCCACAGCGCGGCGGTGGCCAT 6587 32 96.9 34 .............G.................. AGCAGGGTCTGGTGACCGCGGATGATCGCCGCGC 6521 32 100.0 34 ................................ GTCAACAGCGCCGCGCCGGTGAAGGAGGGCCCAC 6455 32 93.8 0 .............T.........A........ | ========== ====== ====== ====== ================================ =================================== ================== 12 32 99.2 34 GTCGCGCCCCACGCGGGCGCGTGGATTGAAAC # Left flank : CGCCATTTCTATGGAAGTGAGGTGTGCGACATGATGGTTCTGGTCAGCTATGACGTGAGCACTCAAGAGGCGGCAGGTAACAAGCGCTTGCGCCGTCTGGCCAAGGCCTGCCGCGATTACGGTCAGCGAGTGCAATACTCGGTGTTCGAGATAGAGGTGGATAGCGCGCAATGGATACTTCTCAAGCATCGTCTGTGCAACCTCATCGACCCGGAACAGGACAGCCTGCGTTTCTACTACTTAGGCACGCACTGGCAGCATCGCGTGGAGCATGTCGGAGCCAAGGCTGTACTCGACCTGAATGGCCCATTGATTCTTTAATGCCGGTGCGAACCTGAAGCGACCGACCAAATCCCGTGTGGTTCGCAATTCGCTATCTGCTTGATTCGTATGCACTTTTTTAGGCCAGGAGTCTGAGTAGGTTCGCTTTGCTTGAAGACGGCATGTTTCGCTGAAGTGATAGGGTTTTTCCATGCTGATCAACACGTTATAAGTAGAGG # Right flank : TGATCCAGCGTACGATATCGTCCCGGGCGCAGGCGTCGCGCGTCCCACCTGTTTTTGCCTTGCCTGACCTTCGCTCGACGACTTTTCGTACAGAACCTAAATCTCCCCGTCGCCGTGCCCGGCGACGGGCTCGTCCTACAGGGAGTCTCCATGACGATGTGGTATCGGCTGGCATTTGTGCTGTTCATCGGAAGTCAGATCACCGGGTGCGCCATCGGCCAGCGGGTGGATTATCGGCAGGCCGCGCCGTATGTGACGGTGACGTCGGACAAGCAGGTCGCGGTGGCGGTGGTGGATGAGCGGCCTTACGTGCTCAAGGGCAGCAAGCGCCCGACCTATGTCGGCAACCTGCGAGCGCTGTATTACAACCCCTACAACGTGACCACCTACAGCGGCAGCCCGCTGGCTGCGGATATCCAGGAGGCGGTACGCAGCGCGCTGGCGCGGGCGTCCCTCGATGCGGTGCCCAGCGCGTCGGTCGACAGGGCTTCCGGGCCTGG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.90,-10.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //