Array 1 531272-535510 **** Predicted by CRISPRDetect 2.4 *** >NZ_PIOK01000002.1 Klebsiella sp. D-Nf1 NODE_2_length_746127_cov_11.6117, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 531272 29 100.0 32 ............................. GAGGAAGCGTTGAGCACTCTGACGCAGTTTTT 531333 29 100.0 32 ............................. CGTCCAGTCCGGCATCCGCAATACGCCGGGCC 531394 29 100.0 32 ............................. GATATTCATGTCATTATCCCATGTAGGGGATA 531455 29 100.0 32 ............................. TAAACCAGGCTGCCCGGCGAGGTATAAAGCCC 531516 29 100.0 32 ............................. TACGCCATAGCCAATGTTTGGCGGGAGTTCGG 531577 29 100.0 32 ............................. GTCCCGGCCCGGTTCGAAGCCTGCACTCTGGA 531638 29 100.0 32 ............................. GCGGGTTTCTTTCGCGTTATCATTCGCATAAA 531699 29 100.0 32 ............................. CACTGAAAGGATGAGCAGCGGCTTCATGTATG 531760 29 100.0 33 ............................. CGTTGCTCGGATTTCGTCTATATAGCCCTGTGC 531822 29 100.0 32 ............................. TATTCCAGCGACTTGCGGCGCCAAGTTTTCCC 531883 29 96.6 32 ............................A CGGCGAGAAACAGTGGGAATCCCGCTGGACGC 531944 29 100.0 32 ............................. CTAATACCTGGATCGCACAAGAGCAGACGTAT 532005 29 100.0 32 ............................. GCTACGTGACAACATTCCGCGACGTCTCAACT 532066 29 100.0 32 ............................. TGTTTGAATAGTGGCGGAGAGAGGGGGATTTG 532127 29 100.0 32 ............................. TATCTGCAACGGTGAGAACACCCATACCATCG 532188 29 100.0 32 ............................. TTCGTTCCGGCAGCCGGGGCAGGGCGCTATGC 532249 29 100.0 32 ............................. GTGGCTGACCGGGGATGCCAGCGCCATCTACA 532310 29 100.0 32 ............................. GTTAACTGGATATGGTCACCGCGCCAGGCTAA 532371 29 100.0 32 ............................. CCCCTTCGTATAGCTCGCGTACTGCTTTCCGG 532432 29 100.0 32 ............................. AACGTACAGGAGAGGCGGAGGTAATTCGCGCT 532493 29 100.0 32 ............................. GCCGTTGATATTTTCAGTTTCATCCGAACACA 532554 29 100.0 32 ............................. GCTGCGTCTTGCTGACCACATACGAATCAACG 532615 29 100.0 32 ............................. ACACCAATCGCATCATCTAACAGGCTCATGGA 532676 29 100.0 32 ............................. CTCAAAAACGTCTTCACCATTTTCATTAACGC 532737 29 100.0 32 ............................. GCATCTTTTAAATTTGATTACATTGATTTTAA 532798 29 100.0 32 ............................. TGCAATCACACAACGACACGCGGGAAATATGA 532859 29 96.6 32 .............T............... CCTTTGGAGAGCGAGAGATTAGGCCGCTTGTC 532920 29 100.0 32 ............................. ACTCGTAAAAAGAGGCGAGCAGTTCGCTATCG 532981 29 100.0 32 ............................. ATAAATACTGCCATTTGGCTTGAGCACACGGC 533042 29 100.0 32 ............................. AGTGTCGCAGTGATGCCGGTATTCAACATAGG 533103 29 96.6 32 ............................A TCCGGGTACAGCTGGTTATACTTGGCAAACTC 533164 29 100.0 32 ............................. GCACCTTTCAGCCCCACATTCTCCGCAGCCAG 533225 29 100.0 32 ............................. CGGGGGCTGGAGAATCTTGCCGGGCTGGTGAA 533286 29 100.0 32 ............................. GTTGACTATGACGGTGAGCCGAACGGCTGGAC 533347 29 100.0 32 ............................. TCACCAGCCTGGAAACCGCCGGCGTTGGCAAA 533408 29 96.6 32 ............................T ATCGCAGTAGCTCGCCGCTACGATGATATGGC 533469 29 100.0 32 ............................. CTGAATACAAATTCCGTACGCCCGGTAACGTC 533530 29 100.0 32 ............................. CGGCTGGTGAAATTGACAAAATGGCACAGGCT 533591 29 100.0 32 ............................. CAGTAAACGTTGTCCCACTTCTTCAGGGGTTA 533652 29 100.0 32 ............................. TGGGTAATGTCCGGCGCTTTATTGCTCGTGGT 533713 29 100.0 32 ............................. TACGCGGCTCATAAACCTCCCTGATTGAGGAC 533774 29 100.0 32 ............................. GCAACATCGCGCACCAACCTGGACGTGTTCAG 533835 29 100.0 32 ............................. GTTCTGACGTTCCGTTGACTATTCGCGGCGCG 533896 29 100.0 32 ............................. TGTCAAACACATCTTAGCACACGATAGACACG 533957 29 100.0 32 ............................. AGATCCCGTCTTGCCCGCCTTGCCCAGGACGT 534018 29 96.6 32 ............................T TTATCAATATCTTCCTGCGGCGGAGCTACGCC 534079 29 100.0 32 ............................. CATTCATGCTCGTACCCTTTACGCAGGTATAT 534140 29 100.0 32 ............................. AGTCATATTGGCATTATCATTGCGGTCCATCT 534201 29 100.0 32 ............................. GGCGCTTTTTCCACATAGCATTTGGCGCGGTA 534262 29 100.0 32 ............................. ACTAATCGTGAACTCAATCTTTTTGGGGTTGC 534323 29 100.0 32 ............................. TCGTGAGCGCCCTCTTTGGTCGCTCTGACCAG 534384 29 100.0 32 ............................. GGCAAATGAAAGAGGATGGTCATACGCACCTC 534445 29 100.0 32 ............................. CGGCTTTGGCAGATCGTCAATATGGAACCATC 534506 29 100.0 32 ............................. CGTATGGCCGGCGGATGTGGCGCAGATTTCCC 534567 29 100.0 32 ............................. AGCTACGAGCACAGCTCGTTTCCCAGGCCATT 534628 29 100.0 32 ............................. GTGGCGAATTTCGTTAACCTGCCGGCCAGCAT 534689 29 100.0 32 ............................. GCGGGCATTCGTGAACTGGAACTGCGGCGTAT 534750 29 96.6 32 ...........A................. GCGCGAACAACACGAGCAATGCGCTCTCGCAG 534811 29 100.0 32 ............................. CATCAACCGGTGATGAAGGAGAGCGATATTGT 534872 29 100.0 32 ............................. CAGCGTCGCCGGGGTATGTGGCGTCGTCGTAC 534933 29 100.0 32 ............................. TCACCCCGCCGATATCCACCAGCCCGGTGCTA 534994 29 100.0 32 ............................. GGTGTCATAAACTGAAACAGCGTTACCGTCAG 535055 29 100.0 32 ............................. ATGCAGGAACAGGTAAAGACGAAGGATGAGCG 535116 29 100.0 32 ............................. TTTAAAAACGTTTATTTTCCAGAAAATGAGAT 535177 29 96.6 32 .........A................... AAACAACTGATCAATACCGTGACGCTGGTGGT 535238 29 96.6 32 ..........T.................. CAGATTCAGTCGAATCAGTTCTGCTGGTGTGA 535299 29 96.6 32 ........A.................... TCTGCCCCGTTATTATTAAGGTGCAATGCGTC 535360 29 100.0 32 ............................. ATGCCCGTCAGTATGGTGGCGGTATGCCTTTC 535421 29 96.6 32 ............................A TCGACGATGTTCTGCGTGATGGTGATGTATGC 535482 28 82.8 0 ...........TT..-.........G..C | A [535493] ========== ====== ====== ====== ============================= ================================= ================== 70 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGTTCTTGCGGCAGGCGAAATTCAGCCACCCCCACCACCTGAAGATGCACATCCTGTAGCTATCCCACTCCCTGTCTCTTTAGGTGATGCAGGCCATCGGAGTCGTTAACGATGAGTATGTTGGTTGTGGTGACAGAGAATGTTCCTCCGCGACTCCGTGGACGGTTAGCCGTCTGGTTGCTGGAGATTCGCGCTGGTGTGTATGTTGGGGACATCTCAACAAAGACACGAGAAATGATATGGCAACAGGTTTCCGTTCTGGCAGAAGAGGGGAATGTTGTTATGGCTTGGGCGACGAATACCGAATCCGGATTTGAGTTTCAGACATATGGTGTGAATAGACGTATTCCGGTGGATTTGGATGGACTGCGGTTAGTATCTTTCCTTCCTGTTTTAAAACAATGAGTTATATGCTCTTTAATAATGTAAAATTGTTTCTTAATTGTTGGTGAATTGTTTTTCAGTTAAAAGCTATTGATATTGAAGTCTATTTTTTTAGT # Right flank : CGCAACTAACAATCAGGCGCCATCTCATAGGCTGTTTGATGGCGCAGGATCAGCACCGCTTGCCACCAGCCCTGCGCCTGAGCTTTTTTGTGTCCTTTTGTCGGCAAGGTATTGATAAACGCCTGGGCGGTGTCTCTATCCTCAGTTAGCGCAAAATAGGCCAGAGCTTTTGCTACTGGCCCGTGCGCATCAGGCGTCGTGCGAGCAGATTGCGTAGCCTGGCGTCGGCGCTTTCGCGCCCGGCATTTTTCGGCATATTAAGATCAGAAGGAGAAGGTGCCGGGACATTTTTATCCACGAAAGCAATGAGCTCATTGACCGTTAGCTCCCGTTCGGCAATGTGCGCGACATCCGGCCAGTAATTTTCTTTCGCCTGATACATCAACCACATCGCCTGCAGATAGTCGTCGCGGTTGAGCGCGAGTATCGCCTGCTGGGCGTGAATACGGCAGACCAGCGTCACAAACTCCTCGCTGATAATGTCATCACTAGACTGCTGG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //