Array 1 3429102-3424763 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014263.1 Spirosoma montaniterrae strain DY10 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================================================================================================================= ================== 3429101 37 100.0 37 ..................................... TGTTCGTTTGGACATACGGCTAAATTACACGTTCTGA 3429027 37 100.0 35 ..................................... TTGGCAGAGTTGCACCCAGGTATCCCTGAATTGGG 3428955 37 100.0 38 ..................................... CCATCTAAGCCGCGCTCGTTGGCAACCTGTCAGACGGT 3428880 37 100.0 36 ..................................... AGTGAACACTACGGGATTGAGATTACTAAATCACCA 3428807 37 100.0 38 ..................................... CAAGCCATGCAAATCAGAGACCTGAAAAACCGAGTCAT 3428732 37 100.0 37 ..................................... CCGAAAAGCGCGACCTGCTACCTGTGCCACTGGATTG 3428658 37 100.0 36 ..................................... CGAGGCATCAACGCATGGCCGTATCGCTTCAGTTGG 3428585 37 100.0 37 ..................................... TTTCGCCATTGGGCTGATATGTGGTGACAACAAGAAA 3428511 37 100.0 36 ..................................... GAGTACCTGACAGAGTACATTGCCCTGGTAAACGAC 3428438 37 100.0 37 ..................................... TCTAATAAGATAATGACGAGGCACATTCCTGCAATAA 3428364 37 100.0 37 ..................................... TATGTATTGTAGCTGCTTACCCCAATAGCGGCCATCG 3428290 37 100.0 35 ..................................... ACACGGTCAGCCTAACGGCTGTAGACGACGCGCTT 3428218 37 100.0 35 ..................................... CCCTGATCGTCCATCAGGGGGCGGGTCTTGAGCGT 3428146 37 100.0 36 ..................................... CCCACAAATCCGCATACGTAAACTAACCGCTCCAAC 3428073 37 100.0 36 ..................................... TTAAAAAGTTACTTAGCTTATGGCGAAAGGAAGAAA 3428000 37 100.0 36 ..................................... CGTCGTTCGACACAATGTCGAACGGAACCCAATCTT 3427927 37 100.0 37 ..................................... ATACCGTTAACGGGACTGGCGTACAATCTGGCCTACG 3427853 37 100.0 38 ..................................... CGTCCGAGTAGTCCCGGCATGGCGTCGTCCACAACGGA 3427778 37 100.0 37 ..................................... TTTCGCCCCCCGGCTCAAAGCTGACGACGGGGGCCAG 3427704 37 100.0 37 ..................................... ACATGAAAGTGTCTAAGCAAATGGTTGAGTCGTTGTT 3427630 37 100.0 37 ..................................... CGTATGCGGATTTGTGGGTAAACCACCTCTCAACCAG 3427556 37 100.0 36 ..................................... ATTCGGCAGCCTGCCAACATCTGCCAACACTATTTG 3427483 37 100.0 36 ..................................... CCCCACTCGTACCCTGTAATGTACCTTTTTTCACCT 3427410 37 100.0 38 ..................................... ACAGGTTTTGGCTGATAGGATTCAGCGCAATACGCCGG 3427335 37 100.0 37 ..................................... ATCTTGCGCCAAATGAGCGAAGAATTTCGGGAGTTTA 3427261 37 100.0 38 ..................................... TCAGAACTCCAAGAAAAAATTGAGGGTTTGACCACCTG 3427186 37 100.0 37 ..................................... TCGATGGCAACTGTAACCCGAATCACATCTACGATCA 3427112 37 100.0 37 ..................................... TGGTTAGGCTTCGATGAAGGTAGTAACGTAATTGCCC 3427038 37 100.0 37 ..................................... CTTTACCCAGATCACCGGCCACCACATAGCGCAGGTA 3426964 37 100.0 37 ..................................... TTTCGAGTATGCGACTATTACGAAGCGTTCGGTGTAG 3426890 37 100.0 36 ..................................... ACCGGAGCGGTGGCCCGCTCCATTGCCGCCTGCGCG 3426817 37 100.0 36 ..................................... GTGCAACAGGAAGACGACATGCTTTCCTGAAAAAAA 3426744 37 100.0 36 ..................................... GCGTACAGTTGTGGGGCGCGAAGGGTGACGGAACAA 3426671 37 100.0 36 ..................................... CCCTGTTACCCGCTGCGCCAATTGGTGATGCCGCCA 3426598 37 100.0 37 ..................................... CGGTGAAGCCCCTACGTACAAAGAACCGGCAAACACG 3426524 37 97.3 36 .........................T........... AAGTAGACACCAAAGAGGCTCCCCACGATCTGGAAG 3426451 37 97.3 37 .........................T........... ATGAGCAGCGCGTGGATCTGTTGGCCCTGCTGGACTT 3426377 37 97.3 37 .........................T........... CTCGAATGTTTCCCGGCTTGTTGACACAAATGTATAT 3426303 37 97.3 35 .........................T........... TCATGGGCTTCAACCTGCACGAAGCTGTTCCGGTT 3426231 37 94.6 38 .................C...T............... CCCGTACCGCCGTGGCTTTCGTTGGTATCCCGAATCAG 3426156 37 94.6 36 .................C...T............... TCGATGCCCGAACTGCGTGCACTCTTGGCGTAGGCC 3426083 37 94.6 36 .................C...T............... TACTCTTCCACAAACTTAACCAGCGGCTCAATCGAG 3426010 37 94.6 39 .................C...T............... CCGAAAGTATTCTGTACGTGTTTTTTTCGGGCAAAGACG 3425934 37 94.6 100 .................C...T............... GTGTACTGAGCGAGTTTGTCCATGACGCCCTGCGACATTCGAGAGCAAAAGCAGGATTGAAACATTTTTTCCTCGTAGGCCCGGCCCTCGGCGGTCGGTT 3425797 37 100.0 38 ..................................... TAATCGTTATCGTACTTGCCGCGCAACCACGTGGCCGG 3425722 37 100.0 36 ..................................... TCGTCTACGTCGATGCTGGCCCCGGCTTTGGTTTTG 3425649 37 100.0 38 ..................................... ATTTTCTGTCGGCTTGTGTGCATTACGGAACTACCCGG 3425574 37 100.0 36 ..................................... ATATAGCCCGATGGTAAACTCTCGGTATTGCTCCAG 3425501 37 94.6 37 .................C...T............... GTAAAGGATTAAGCCACCGGCCACCACTGCCAGCAGG 3425427 37 97.3 37 .................C................... GCTAAATCGGGATTTCGGATATAGTCAATAAGCATAT 3425353 37 97.3 36 .....................T............... AGAATGGAAATGGCCCGAATGCCGGGGCTGCTGACG 3425280 37 94.6 38 .................C...T............... TGTACCAGTTGCTGGCAAACCCGGAGGCCGACATGCGC 3425205 37 94.6 37 .................C...T............... ACTGCCGCGCCGAGGTAATAATGTGCGCCGAGGACAT 3425131 37 91.9 42 .............C...C...T............... CTACGCTCTTCGTGGGTATCATCGAACGCAAAGCCGCCGAAA 3425052 37 94.6 35 .................C...T............... CCCGCTTCAAGCACGGCGGGTAGCTTCGACATCGC 3424980 37 91.9 145 .................C.A.T............... TGTTCTTCGGGAGTCATGAACGAAATGCGTTTAACCGTCGTTTTTGAAATGAAGCACTCGAAACGGAATTGGATTGTAGATCCTCTAATCACGTCGGGTGCTTTTTTTATAGGTGCAGGTGGTCCATGATGGCATAGAGTGAAAT 3424798 36 83.8 0 ...............T.C............C-...GA | ========== ====== ====== ====== ===================================== ================================================================================================================================================= ================== 57 37 98.3 40 ATTCGAGAGCTAATCCATTGAAAAGCAGGATTGAAAC # Left flank : GCTCGATTATAAGTTTGCTGAGTACAAAGACAAGATTTTCAGTACGTATCAAACTCAACTCTATTGTTATGCGTGGTTAATTGAGGATAACTTCGACCGGCGCGTTGACCGGGGCTTTCTGGTCTACACGCGCAGCAATAATCGGGTTGTGGAGGTGCCAATCACCGACGAGAACAAAGCAGACGTCAGGCGGGCGGCAGAAGCTATTTTTTCGATTATTGACCGTAACTTCTTTCCGAAAGCTACAAAAGCTAAAGCGCGATGTGTAACTTGCACATACCGGAATGTTTGCATCAAGTGATTGGGCATGTCCGTTCGGCAATGTATTTTAGGGGTACTGAAAATGCTGCGTAACGTGCTGAAGGTTTGTTAGTTATGTTTTCGGAAAACGGTAAGATTATGGAGGAATTACGTTCTTTGACAAATGATTTTTGGCGAAAAGAAGTAAAGCAGAAAGATACTCTACTTTCTGTGAATGAGCGAGTTACGACTCCCGACGC # Right flank : GCGCGAAACTCGAAAACAAGGAACTGAATGGGAACGAATTGGGCAGGCCAACCTGATTGCCTACGGTATACGGGTACAACAGGCAGAACAAGCCAGACAGAACCAACAGCAATAACTAAAATAGCCCGGATACACAGTATCCGAGCTATTTGCATTCTAACGCAGGCAGTGGTTAGCTGCCCATCCCTTGCGGGATTTCTTTATAGACCCGATCCCGAACCAAACGCAGGCCGTTCAGTTCTGGCACGTCTACAATATCGGCGGGCGGAATAACGCCCCGAATCATCCAGTTTGTTACGTTATTGACCGAACGCAGGTTGTACTTGCGGGCGTACTCCATCGGCGTAAGCCATTCGTTCAGGTCGTATTGTTTGCCGTTCAGAGCCAGAAACCGCAAGGTTTCCTGTTGCTCAAACTCAACTTCATCTAAGAAGCGGTTCAGCGCATCAGACTTAGCCCGCTGAACGGCCTGTTTTTCGTAGCTATCCAACCCTTCACTG # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:0, 3:3, 4:0.91, 5:0, 6:0.25, 7:-0.26, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCGAGAGCTAATCCATTGAAAAGCAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.10,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA //