Array 1 206051-205230 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUBQ01000006.1 Paenibacillus paeoniae strain M4BSY-1 Scaffold6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 206050 32 100.0 34 ................................ ATGAAAATGACATTCGAAGCATTTAGCATAAGAG 205984 32 100.0 34 ................................ AGGCATTCACTCGCATTGTAGCAGAGAGGGATAA 205918 32 100.0 34 ................................ CATATGAGGACAGTAGCAGCCGAAGAGGAGGAAA 205852 32 100.0 33 ................................ ACCTTCGAAAGTTAGGTCGTATTTGTTGGACAG 205787 32 100.0 33 ................................ ACCTCCTCTCTATAACCAATATTACACTATGGT 205722 32 100.0 36 ................................ TCAACATATTTGTCGAATTCGTCCAACCATTGCAAG 205654 32 100.0 34 ................................ TTAATAAACTAACACTAGCTGATCGTATAAAGGG 205588 32 100.0 33 ................................ ATCGCGATACCCAATAGAACGAATGCAGCTACA 205523 32 93.8 33 ..............................TC TTGGGCCAATAAGCTGCAAATGCGAGATGACGG 205458 32 100.0 34 ................................ CTCCAGCGCGCCGTCAATGCTGAAGGAGCTAAGA 205392 32 100.0 34 ................................ GCTTCGAATGTAAGGCGGGGAAGCGGGATCGGAA 205326 32 100.0 33 ................................ CAGTCGGCCAGAGCAATCCTGAGCGGATAATAG 205261 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 13 32 99.5 34 GTCGCACCCTACGCGGGTGCGTGGATTGAAAT # Left flank : CGCATGGACATGCAGTTATGCGATACGTATGCGTATGAAGAATGTTCGCCGCTTGCCTGTGCTTTGACCGCATTCGGCGGTGTGGCTGACACTGGCATCTCGGAGGAAGATATGCAAGCTTGGGAGACTCAGACAGGAGAAGCATTCGAGCTCTACATGCTGCCCGGCGATCACTTCTTTATCCATAGCGAAAGTGAGCAACTACTGCAGTTGCTGTCCCGCAAGCTGGAGCAAATTCTTCATTCGTCTGCGTTGTCTTAGAACACGGGAGAAGCTGTTACTACACGCAACTTGAATTGAGACTTCTCGATGTTGTGGGGCGATATGTCCTAGTGCGAATGTGAAGCGAACATAAAATCCCTGGGAGATTCGCACCTCCGGATAAGTCTAAAAAAAGTTAAGCGATATGAAAAAGATAGAAAAATGATAGTAAACATCATTATAATGATTATATGTTTCATTAAAGTGAATGAGTTGCTCCTTATAGGTTGAAAATCGCT # Right flank : AAGAACGCCGTCCATATCGGGCAATCCCTTGCAGGTCGCAGCCCACGCGGGTTCGTGCGCCAAAGGACCTTGAATTCCACTGCACGGTGGATTTTGAGGTTTTTGTTTGTATCAGAAATTCATAATTACGCAGAGTTCTTGTATGGGGTTGATACCAAGCACATGGAGGGAAGAATGGGCGATAACGCCTCGAATCGTATATGAGCGATAGCCTTTTTAATGCTGAGCTATACAGCTGATTTCCAAAAAACAATTCCAAAAAAGGTAACTTTATGATGGGAGTAAGCGTCTAACTAAAGTGGGAATTTTCTTAATCATTGGAGGATAAATGTATGCAATCAAGCAAGCGAATATTAACAATTATGCTGTCCATTGCCTTACTGGCAACAGGCGTCTATACATGGCCGGAGACGGCTCGCGCGGCAGCAAAGGCGATTACCGTTACCAAAAATAACTGGGAGCCCGTCGAATTGAATCATTTGCCGATCCTGCAGAATGGA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTACGCGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.60,-8.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 228660-225601 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUBQ01000006.1 Paenibacillus paeoniae strain M4BSY-1 Scaffold6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 228659 32 100.0 34 ................................ CCCTTATCTCCTACAACTACGAATCTACCGTTAC 228593 32 100.0 34 ................................ ATTTGCGTGGTAGCCTGATCATTCAAATCCATGA 228527 32 100.0 34 ................................ TCTTAATATCCTATTATTCTCTTGCAACTCCGTA 228461 32 100.0 34 ................................ CATATCCCTCTGAACAAGACGCTTGACGTAGCCT 228395 32 100.0 35 ................................ TAGAGCAGCAAACGGCGACAACCCTACGGCCATCC 228328 32 100.0 33 ................................ CCGATTTAGCCTTGCTGGCCGATCACTCTCGTA 228263 32 100.0 34 ................................ TCCGGCGTCCCCCCGTGCCTTGATGCCGAAAAAG 228197 32 100.0 34 ................................ CTATAGCATCATCAGACAAATACTGATCCATCAA 228131 32 100.0 35 ................................ TTAATCACAACTGTTGAACCCATCTTCCGTCCCCA 228064 32 100.0 34 ................................ ACTGGACGCTTTACGGCCAAGGCGCAGCCGGACT 227998 32 100.0 33 ................................ TTCGGCTACTGGAACGAAAGAATGTAGATCCTC 227933 32 100.0 35 ................................ TTCAAGAATCAGACATTGATCTCAATGAAAACTGG 227866 32 100.0 34 ................................ TTGGACGCGCTCTTGCTGGAGCTTCCACCCGTTG 227800 32 100.0 33 ................................ TGCGCGGCCAAGCCGTACCGATCCCGACCACAG 227735 32 100.0 34 ................................ ACCTCTTTAAAATAATGTCAACTGCACAAATTCA 227669 32 100.0 33 ................................ TCCGAAAACAAAAAAAACGGCTAGAGCTGAGTG 227604 32 100.0 34 ................................ CGCGTGCTCCTGATCTCCCTGCAGCGGACACAAC 227538 32 100.0 35 ................................ CAATTCAGCTCGGCTCACCAGGTCTCACCTTCCTT 227471 32 100.0 34 ................................ GATATTGATGATTAACGCTCGGCACGACGCCGGG 227405 32 100.0 34 ................................ AAAAAGGAAGTTTATGCGGAGCTGGAAGGCGTCG 227339 32 100.0 34 ................................ TTAAACTCTCCAGTGACATAAGCGTCCACGCCCT 227273 32 100.0 34 ................................ TATGATTTTGTCGCGGTGATGACGGTTGACGAAC 227207 32 100.0 34 ................................ TGTCAGTTGACCTGATCCACTGAAGGTGATGAAG 227141 32 100.0 34 ................................ GGTAATGCCGGAGCAGAGGCAAAGGACGGGGTAA 227075 32 100.0 35 ................................ AATATGGGGTATGGTAGATAATAGTCCTATAGAAA 227008 32 100.0 34 ................................ GGCGATTGGACCATACAGAATCTATTGAGCTGGA 226942 32 100.0 32 ................................ CCATGCTGCGGATATGTCGCGAGAAGGTCTAT 226878 32 100.0 33 ................................ CGGCAACAAAGTATTGAGGTCACCGAGAGGTAC 226813 32 100.0 34 ................................ GTCTCATGCCCGCCTGCATCAATTGCCAATATGC 226747 32 100.0 34 ................................ TTCTTGGATCTACAAGAGCGAAGTTCAACACGTA 226681 32 100.0 34 ................................ AAATGAAGGTGATGTTTTACCTGGTAGTGATGAA 226615 32 100.0 34 ................................ CGGGCCTAGTGCTTGCGCCTGGCTATACTCATAG 226549 32 100.0 34 ................................ GATAAGGCGCTTGTCTCGATCAACGAGATCAATC 226483 32 100.0 33 ................................ ATTCGGATAAAAGTTTAGCCGCTTTGAAAGAGG 226418 32 100.0 33 ................................ CTCGATCTGTTTTTTTGTTTTTTGAATGAGCTC 226353 32 100.0 34 ................................ ATTTTTCAACAAGTCACACCGTCCAAATGGTTGA 226287 32 100.0 33 ................................ CTCAATCGATCCGTTGAGGGTATCCATTTGCTG 226222 32 100.0 33 ................................ TAAAGGAATTACAAAAAGAAATAGGAAGTGTAA 226157 32 100.0 33 ................................ ATACTCAATACTTATGCCTGCTATATTACATAC 226092 32 100.0 34 ................................ GGGTTTAGGTCTTGTTTTTTGGGTTAGGAACAGC 226026 32 96.9 33 ..........G..................... AAGCGATTGGGTGAGTCGTCGTCCGATCTGCTC 225961 32 100.0 34 ................................ CCCGCAATCACATGAACAATCCCAGTAGGCTTTA 225895 32 96.9 33 ......T......................... ACCAGTTGGTCAATCGATACGCCAAGTGCGTTA 225830 32 96.9 35 ..............A................. CTCAGCCCTTGTCATGGGGCCACATATGCGCACTT 225763 32 100.0 33 ................................ AAAGTTGACAGTCTACATGAACTGCCAGATTAA 225698 32 90.6 34 .........C.............A......C. AATAATGTCTAGAAATTCCGGTGTTTGATATAAA 225632 32 84.4 0 .........C........TT..A....A.... | ========== ====== ====== ====== ================================ =================================== ================== 47 32 99.3 34 GTCGCACCCTACGCGGGTGCGTGGATTGAAAT # Left flank : GTGGAAGTAGGCGATTGAATTGATGGTGCTCATTACGTATGATGTCAGAACAGTGACAAGTACGGGCCAGAGGCGATTAAGACAAGTCTCGAAAATATGTCAGAATTACGGACAACGTGTTCAAAACTCTGTGTTTGAATGTGTAGTAGACGCGGCTCAATTCACCTCATTAAAATTACAGTTGATGGATATTATTGATCAAGATGAGGATAGTCTGAGATTCTATCAGCTAGGCAATCAGTATAAAAACAAGGTTGAGCATATCGGTGCAAAAGCCTCATTGGATGTGGAGGGCCCGCTCATATTCTAGTGCGATATTCTGGTGCGAATGGGAAGCGCACATGAAATCCCTGGGGGATTCGCACCAATTTTGAGCGTCGGCAAGACACTGGATAGTTAGGAAAAGAAGTTTTTTCAGCCAGTTTTATCTTTATTGGTATAATAGTTATGATTTATGATTGAATAAGTCGTTATTTTGACGAAATACATCATAAATCGCT # Right flank : ACTCAATTGTTTATGCTCAAAATAAAAGATGCCAAGACCATTCGAACGATCGAATGGTCTTGGCATCCACTTAACTATTTCTCTCCACTTTCTCCCCAATCCACGACTCGTAGCATTTCACGACAGCGCTTAAGTCTTCTTCGCCGAGTCCGTTGTTGCACGTAATTTGGAATAGCTGTTGAACAGTCGCTTGGATGGGAGAAGGTACTTGCAGCGATTGGGCAAGTCGGCCTGCTAACTTCACGTCCTTGAACATCAGCTGAGCCATGAATTGAGGCGAGAAGTCGCGGTTCAGGATGCGGGGACCTTTCACCTCCGCGGCGGCGCTGCGAGCTCCCCCGCCTGCAAGTATCTCAAGGAACAACTCGGGGTTGCCGCCGGACTTCTGAACGATAGACATCCCCTCTGCCAGTGCTGCTATATTGGCAGCGACGATCAGATTGTTTGCCAGCTTCGCATTGGCCCCCGTTCCGCTCGGCCCCATGTAGAGAGCTTTTCTA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTACGCGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.60,-8.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 239022-237156 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUBQ01000006.1 Paenibacillus paeoniae strain M4BSY-1 Scaffold6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 239021 32 100.0 34 ................................ TTAATCTGCTTAGCGTTAGGGAATCCGATCTGCT 238955 32 100.0 33 ................................ CACCTTTCGAAAGGCTACAAACCGATAACCAAA 238890 32 100.0 34 ................................ CACCTGCTGATTGAGTCGGTTGTAGGAAGCGTTG 238824 32 100.0 34 ................................ CATTTTTCCCGCCTTTGGACTTTGGAATGACATG 238758 32 100.0 34 ................................ TCCTTCCTTCGTCGTTTTAATAGAAGTAGTATTA 238692 32 100.0 33 ................................ GAAATGTACGGGACCGGAAGCCATGACGACGTT 238627 32 100.0 33 ................................ CACGATAGCCGACGCGACCTTACGCCGATATTC 238562 32 100.0 33 ................................ TTTTTCGTATTGGGACGGAAAGCAGACGGACTT 238497 32 100.0 34 ................................ ATGGACATTGAAAAACAGCGGAAGAAGCCGTTTG 238431 32 100.0 34 ................................ CTCGGGCTGGCGAATACATCGTCGTGGTCAAAAG 238365 32 100.0 33 ................................ ATTACGTCAGTGGTATGAACAGCAACAGCAGAA 238300 32 100.0 33 ................................ ATTACGTCAGTGGTATGAACAGCAACAGCAGAA 238235 32 100.0 34 ................................ TTAACTCTCAACAAATCATGTATGAACGTGCCGT 238169 32 100.0 33 ................................ CCGACACCGCCGCCAAACAAGACCGAGCAATTT 238104 32 100.0 33 ................................ CCTCCACGCGTTAGCGGGGCGTTAGCGGGCAGC 238039 32 100.0 33 ................................ AGCAAGTTAATAATCAGCCTGCTTTACCTGCAC 237974 32 100.0 34 ................................ TGGCTTGGAGAGAATGATGTATATGCGCATCAAG 237908 32 100.0 32 ................................ CATTGCGGTCGCATATTCGCGCTTACAGCACC 237843 32 100.0 34 ................................ CGAATGCACATGTTCGGCGGATATACACCGGTGT 237777 32 100.0 33 ................................ ATCATATTGGTGTTGATCCGCACGCCATCTCTA 237712 32 100.0 33 ................................ ATCAGCATCGCTCAGCGATACCGGGGTGCTTGG 237647 32 100.0 35 ................................ TACAAAGGCTCAACAAGGAGGTATCTACGGATGTC 237580 32 93.8 34 ....T.............A............. GGAAAGTTACCCTCGACTGTAAATGTGAATGGTG 237514 31 96.9 34 ..........-..................... AAAACATGAAGGTCAAGTCGCTGGAAATCATGGA 237449 32 100.0 33 ................................ TGGGCCAACGGGCAGCGCTCTCTATGGTTTGAC 237384 32 100.0 33 ................................ GGCAAAGGCCTCCCTCTCATCTGCCGGAACAGA 237319 32 93.8 34 .......T.......................C CCATGACAGCAATGCAAGACACGATCCGAAGGTT 237253 32 87.5 34 ......T.T.........A.......A..... CGTCTGCCGATCCGAGAGCCCATCGGAGTTAATC 237187 32 87.5 0 .....C.....A..A........A........ | ========== ====== ====== ====== ================================ =================================== ================== 29 32 98.6 34 GTCGCACCCTACGCGGGTGCGTGGATTGAAAT # Left flank : CCCTGAGTTTTGGCGTCCTCCGAAATAATATATGGCTTTAATTGTCCCATTCACAGACATCCTTTCTTGATCAGATTTTAAAAAAGTCTCAAACATACTATACCCGATAATCTTCAGCCTCATTTCTTTTAGATTGCTATGATACGAATGAATGTCTTTTAGGATGCTTACAATGGCAGCAGCGAGAGATAGTGTTGTTTTAGAGGGAATGATGCCAACGGTATAAGTTCAAGTTGAATTTTCTTTTTTTGTTTGAAATTGTAATGTTCAACTGGTTCGTATATAATCTTTTTTACTACTAAAAGGTGAGGCAGGACTAGTGCGAAGCAATGGTGCGAATGTGAAGCGAACATGAAATCCCTGGGGGATTCGCACCTCTGAACATGTCTTGAAAAATACTTTTTGGTATGATTAAGGTATAAAATGATTATTTCTTTCATTTTAATGATTTTATTTATCGTAAAAAAGATTGAATAACTCTTTATGGGTTGAAAATCGCT # Right flank : GCCATTCTCTGTAGTATCACAGTATTGGATTTAGTTGTGCCCACACGAGTGTGCGATGTGAAATTTGGCACGTGTGCCGGTGATTTGTCTTTCATTGATAGTCGCCCTCATGCGGACACGTGAAAGGTATAAATGGACTTTACTCTCACAAGATGCCTATCTTTTCAATCATATATTTTGAAGCCAAACCTCTGCAATCAAATATGCAGAGGTTTATTTTTGTCCACTACTATTTCGACCCTCATTCTCCATCTTTGAATGTATATCCAAAATAAAAGAAAATTTAGGAGGAAACTGTTTGTTTTTGACGAATCTTATAACCTAAGCACCAGGTAATTGGACTCATCTGTCAGAGCGTTGCCATTCTGAATGGAGATAAGGAGAATTTGCATGGACTATATTGCACATATCCGAGAGAGTGACGGACAGATCCAGAGTGTAGAGGAACATCTATTGGGGGTTCAGAAGCTAGCAGAATCATTTGGCGAAAAAATCGGTGT # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTACGCGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.60,-8.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 246398-245310 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUBQ01000006.1 Paenibacillus paeoniae strain M4BSY-1 Scaffold6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 246397 32 100.0 34 ................................ CTAATATTATGCCATCCAAGTCTGAGGTTGGAAG 246331 32 100.0 34 ................................ TGATATGTCGTCACGTAGTTTGAATTTGAAGGGG 246265 32 100.0 35 ................................ TCATATTGCACCCGCAAAGGTTCATCCCGTTGCAA 246198 32 100.0 33 ................................ AGGGTAGTATCTAGTTTGGTCACTGGATATTAC 246133 32 100.0 34 ................................ CTGCAAACGGTGAGTATAAGCAGCCACGCTTGAA 246067 32 100.0 34 ................................ CCTACTTGTTGTGGCGTAAGTTGATGAAACTTGA 246001 32 100.0 34 ................................ AAAGCACGAAGGCGGTAGACCGCAATACGAAGAG 245935 32 100.0 33 ................................ TCTCCTGGTCTTGTGAATTGTAAAGAACCAATC 245870 32 100.0 34 ................................ ACAATAATATAAGTGTGTGATTTGGGTTACTCGT 245804 32 100.0 34 ................................ TTTTAGCAGGGCATATCGAAAAAGCACCGCATGA 245738 32 100.0 34 ................................ AGCTCGATTGCATCAATCGTATGCTTTAAGCCAG 245672 32 100.0 34 ................................ TTTCGCGTTTTTAACGGTAATGCCGTACTCGCCG 245606 32 100.0 34 ................................ TGCAGGAATCTGACATTGATCTCAATGAAAACTG 245540 32 100.0 33 ................................ CAGGGGTGTTCGCCAAATAGTGTAACAATCATC 245475 32 100.0 34 ................................ TCTGGAGTATCGTTGCTCTTTGGATAGCGATACA 245409 32 100.0 36 ................................ AGGGCAGGAATAAACAGTGGGCTTTTGTTGTGAAAT 245341 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 17 32 100.0 34 GTCGCACCCTACGCGGGTGCGTGGATTGAAAT # Left flank : AAGGCGGTTATGCGAACGTGCTTGTGACGGATCATATTACAGCGCGGCATTTGCTGGAGCGTGGGGAGTAACGGAAGTAGAGTAATCATTTAAACATATAAAAGATGAGTCATATTCAAAGCGGATAATAAACTCGTCTTTTTGCGATAGGATAGAATGCTCTTTGTTTTATAAGTGAACGGCTTCATGGCATCCGCCAAGAAGAATTACTATATTTAATAGTAGATAAAAGAAAAACTTTCTTTCTTTTTTTACTTAAAATTGTAATGTATAACAAGCTCGTATATAATCTTTTTACTACTAAAGAGCGATGTGAGCTAGTGCGAATCAGTAGTGCGAATGTGAAGCGCACATAAAATCCCTAGGAGATTCGCACCTCTAGATAAGTTTTAAAAAGACTATGTGTCATGAAAAAAAATTATAATGAGTAAAAAATTTGTTTAAATGATTGAATATTTCATTAAATTGATTGTTCTACCCATTTTGGGGTGGAAATCGCT # Right flank : GTATACCGCGTTGATCATAAGGTTCAATGTCTGTACGATCCCTAGCTCATCGCCCTCATATTTACTTTTATCTATGACAGGATCAGTCGCAACTTCTTTGAATTCATCAGCAGTTGATGTCTTATTCCCCAAAAACTATCTTCCAAAACTAACCTCTCCATTCAATTATCCATGCCAAATATCAAGACTCTAAATAGGATCGAAAGATTTCTGGGAATGAATAGAATAAATATAGTTTCTGAAATGTCCGCTCAACTTTTATATGATACAATATAGGGAAAATTTTACTAATAGTTTAGAACTAGAGGAGATGGGTTTTATGAAGAGTTTATTTCGAAATTTTGAGTTTAAGCAATTATCTTTGAGTTTAAGCGGTCCAGGGATTACGGTCGAAAGAAAAAATAATGCACTCGCTTATTTAGAAAATCAAAGTGATGAGACTAAACAAGAGGTGCTGAGAGAGCTGTTTGTGATTAGACATTCACTTTCTGAGTTTTATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTACGCGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.60,-8.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //