Array 1 84537-87345 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAISV010000002.1 Enterocloster clostridioformis strain MSK.2.59 NODE_2_length_265174_cov_235.561, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 84537 32 100.0 35 ................................ TTTTTATCAAACGGAAATAGTAACGGAAGCCCTGC 84604 32 100.0 34 ................................ CCATTATCCAGGAGATGCCCACGGACCCGCTGGA 84670 32 100.0 34 ................................ CTCTATTTCGGCTACCGGATACGTCATAATAAAT 84736 32 100.0 34 ................................ AATCACTGTGGAGCAGTATTGGAGTTTGACAATA 84802 32 100.0 34 ................................ CTTGGCTATCTCTGTACAGTCATAGAGCTTTGGC 84868 32 100.0 35 ................................ CTCCATGAGCGTATCTATCTTCTGGGCGTATTTAC 84935 32 100.0 35 ................................ AAAATTAGAATTTAGCCGCCCACTGCTAAGTGTGG 85002 32 100.0 34 ................................ ATGCATAGAACAAAGTCCGGTGGGATGAGGCAGC 85068 32 100.0 33 ................................ CTGCCGGTGTACGGACGTACCGTACTATGATGA 85133 32 100.0 34 ................................ TCCGCGCGTATATGGAAACAGAAGGAATATTTGC 85199 32 100.0 34 ................................ CTTTTACAACGGCCGGATTTCCACCCGTGGCAAA 85265 32 100.0 33 ................................ ATGCATCGTCATCTCTCTTTATCTCACACTGCC 85330 32 100.0 34 ................................ GCACGGTCAGTCTCTGTCGGCACAAATCCTACCG 85396 32 100.0 33 ................................ TTCCTTCCTCCCAGCCGCTTTCTATGCAGGCGT 85461 32 100.0 33 ................................ CTCGTAGAGAAGAGAATGCAGAAATTGTGTTAC 85526 32 100.0 35 ................................ TTAACAAAGGTGGCAAAAGGTGAGACCGACATCGT 85593 32 100.0 36 ................................ CATCGTTGTTGTGCTCCCCGTTCAGGATGTTATTGT 85661 32 100.0 36 ................................ TGTTTTTTCCTTGTCCACCGGCCTCACCTCCTCCCG 85729 32 100.0 34 ................................ TGCCATGACTTATTATGTTGCAGTTCTTGAAGCC 85795 32 100.0 35 ................................ TGTTTCCAATCAGACAGTTCTTTCTGCATCGTCTC 85862 32 100.0 35 ................................ TATTCCAGGGTGGGAGGAACACCAGAATGTGGAGG 85929 32 100.0 34 ................................ TCCGATTGCCATGAATCCTCCAAGGTTACTTATT 85995 32 100.0 34 ................................ AGTACTTTTTCAAAGAGGTTATGGCACAGCTTTC 86061 32 100.0 35 ................................ TGGGAGTACCTGCCGGTCACCGTGCAGACCAAGGC 86128 32 100.0 34 ................................ CTACAGGAACGCAGGAGCCGGCCATCCAGGAGGG 86194 32 100.0 35 ................................ CTGATTGGGGTAGCTCCACCAGTGGTATCAAGAAA 86261 32 100.0 34 ................................ AGATGTTCCGCATCATCAATAAACTGTTGCCCCA 86327 32 100.0 35 ................................ CGTGATGATTAATATAGTACCGGCTCACGCGAAGG 86394 32 100.0 34 ................................ CCGCATTTATTTAAAGCAGAACCGGGAGCAGATT 86460 32 100.0 34 ................................ AACCAGCCGGCTATGCCGGCCGCGGAGTAAGCAA 86526 32 100.0 35 ................................ AGACGAACGGATGTATATAAACCAGTGGTTTAGCC 86593 32 100.0 33 ................................ CCAGGAGCAGAGCATGATTAATTATCTGCTTAC 86658 32 100.0 33 ................................ TCAAAGAGTAAAAAAAGAGGGGTTGGTTATCAG 86723 32 100.0 35 ................................ TTACTGTCAAAATAGATGCCTATACCCATGGTAAT 86790 32 100.0 33 ................................ GGAAATGTGCTATATGCGGCCGGGATGGAGAGA 86855 32 100.0 34 ................................ TGCGAATGGCAAAAGAGATTGAAGCGTTGCCACC 86921 32 100.0 33 ................................ GCACCAGGCTAACAGCACGTTGTAATCCTCACG 86986 32 100.0 34 ................................ ATATGGGCAGTGCCGGCCGTACATCCTGGGGAGA 87052 32 100.0 34 ................................ TGCCCATCGGGAACTCCTCCAGCTGCTTAAGCAG 87118 32 100.0 33 ................................ ATCTACCGTACAGGTATCCATACTATACATGGG 87183 32 100.0 34 ................................ GGAACGGGAGATGATGAAGTGTACTGGAACGGGC 87249 32 100.0 33 ................................ GGTCAGAAGAAATCCACCCAAAGGGATATATAT 87314 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 43 32 100.0 34 GTCTCCACCCTCGTGGTGGAGTGGATTGAAAT # Left flank : TGCTGGTACTGATTACATATGATGTGAATACGGAAACCGCCGCAGGCAGGGCCAGGTTGAGAAAGGTTGCAAAGCAATGTGTCAATTATGGCACCCGCGTCCAGAACTCCGTATTTGAATGTATTTTGGATAATGCCCAGCTGATAAAGCTAAAGGCGATACTGACAGATATAATTGATGAACAGACGGACAGCCTTAGGTTTTACAACCTTGGGAATAAACACACTACAAAAGTGAACCATGTTGGGATGAATAAGGGGATTAATGTGGAAGAACCGCTGATATTCTGACCTGGCCGCGGGCGGTAAAGCGGTATAAAGTATTTTGGTGCGAACCTGAAGCAAACATGGATTTACGGGGAGATTCGCACCGGAAAATTTGCACAATGAGAACGGATTTGCGAGTGTGCAGGGATGGTTGGCCGTGATTTGAGGGGGTGGGATATGATTTGTTTGTGGAAATGTGTTGAAGAATAGTAGTGGTTATTGTGTAGTATTGCT # Right flank : TTCCGGGGTAGTCTCATAGCCGTTCACATAATAGCGTCTCCGCTCTCGCGTCGGATCAAGTTAAAAATCCGCCAATTACAGAATTACATCCAGTTGCCCACTCCTCTGCCCTTTTCGCAAACGCCGCAATCCCTTTTGAACTGCAAAAAAAGGTTAGGTAAAACTAATTCCGTACAACAAAAAAGATGGGGCAAGCCCCATCCCTTCCATAATCTTGTTAGAATGTACAAAGAATGCATACTTCCATTATCCCTTCCATGCCCGAATCTCTTTAAGCCCCGGCACCAGCACCTTAGCGCTGGTTTCCAGAATGATCCGTCCCTTTTCAGCTGTGGCGCCTGAGGGGTCTCCGCCGATTCCGATGGGTTTGCCGTCTGCTGTTTTCCAATCCTCGGATACCCAGCCAATGGATACATTTCCGTAAGGTTTCAGCGCCTGATTGTCTTTAAATGCAGTGGGAATTCCTGCCTCTGAGGTCTCTGACTTTACCAGGGACGGGT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCACCCTCGTGGTGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTCCACCCTCGTGGTGGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.40,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 18221-22627 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAISV010000019.1 Enterocloster clostridioformis strain MSK.2.59 NODE_19_length_82665_cov_210.605, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 18221 33 100.0 34 ................................. CAGAATCTTGGTGAGTGTGCAGCGCGTCATCCGA 18288 33 100.0 35 ................................. CTCTGGCTGCTTCCGGATCCATGTTTGGGTTCAGG 18356 33 100.0 34 ................................. ACAGTCTCACGCCCATGGCCAGCGCCATGACCAC 18423 33 100.0 33 ................................. ATAAAGCCTCCTATCAAAAAATAAGGCCCAGGG 18489 33 100.0 34 ................................. CGCGAGGGTATATTCCCCCATGGAATCCGTCATG 18556 33 100.0 34 ................................. AATATGACATCAATTCCCTCACCACGGTCACGGT 18623 33 100.0 36 ................................. CGTAAGCCATTAACGTGGTGTCGTCGAACAGATTAG 18692 33 100.0 33 ................................. GTGAGGTATACAAAAAGGCGATTTCTTTGTTAC 18758 33 100.0 36 ................................. AGGATGAAAAAGTCCTTAAAAATCTGTATCAGGCCA 18827 33 100.0 34 ................................. AATAGGCAGACTCCCGATGGCTTCAACCAGCATT 18894 33 100.0 34 ................................. ACTGTAAACAGTTTTTCGGGCGGCACGCCTAATG 18961 33 100.0 34 ................................. CTTGAAAATTATGCAAGAGACGGAGTCGAATCCG 19028 33 100.0 34 ................................. TTTGTGCCGCATACCATGGAGGAAATCTATTATG 19095 33 100.0 35 ................................. ATCCGCAAATTCAGCGAGGCAGAGGGAGCATGTAA 19163 33 100.0 33 ................................. ATGAAGAAGATAATGTTGTATGTATGGGTAAAG 19229 33 100.0 33 ................................. CTGTGGAGGTCATGCTGATGGTGACAGCATCCT 19295 33 100.0 34 ................................. ACTGGCCGGCATGACTCAGCAACAAGTAGCTGAC 19362 33 100.0 35 ................................. TTTATATCTATCAATAACAGTAAAGAAGATCGCAG 19430 33 100.0 34 ................................. TGGTGGAGGATGGTCCAGTACTACGGGGAGTTCC 19497 33 100.0 36 ................................. AGCATGGCAGTGCTGATAAGGAAATTGTATCACATG 19566 33 100.0 33 ................................. TACGATAATGCCGGAGCATTGACCTTGGTTGAA 19632 33 100.0 35 ................................. CCTGGGCAGCCGACAGCGGCAATTTTGCGTTGTTA 19700 33 100.0 34 ................................. CAGAGAGCGCGAATCCTTATCAAACTATATACGA 19767 33 100.0 35 ................................. CGAAATATGGGTGTGAGATTGTGGATAGTAGTGCC 19835 33 100.0 36 ................................. ATCCGTCTGGCGGGCCTGGCCAGGTGCGCACGCCGC 19904 33 100.0 36 ................................. CCCCGGAATGAAGCGGATAGCTTCAATCGGATCATG 19973 33 100.0 33 ................................. CCTGGATGCTTGAGCGGCCTGCTCTTCAGCGGC 20039 33 100.0 35 ................................. CGGAAAGATTGCGGTGGCTTCGCCAGCGGCAGGGC 20107 33 100.0 34 ................................. CTCCACCGCCTCGTCGTGACGGCGTTTCAGCTCT 20174 33 100.0 33 ................................. CACGCATGAGCAGAGCACAATCCGGCTTAACGG 20240 33 100.0 36 ................................. ATATCCTGTGATTACTCCGCCCAGCTGGCCGCCAAT 20309 33 100.0 34 ................................. CCGCATACACATGGGGCTGTCGAACGCATGGAAC 20376 33 100.0 34 ................................. CGCCATGTCCAAGATGATGGTCAATATGCAGCTT 20443 33 100.0 34 ................................. AGCGATGCCTTAACATTAGCCAACACCTCTTTTG 20510 33 100.0 35 ................................. AGGGACGGAGACTTGCTAAAATACCATTGCGGGAA 20578 33 100.0 34 ................................. AAGAGAGTTGGCATCACTACTGGCCCAAACACCA 20645 33 100.0 33 ................................. ATCCGCCACAACTTTCTCGGCTACTGCATCTGC 20711 33 100.0 35 ................................. TTTTGTACTCGGCTCTGGCAGGAGCCTGTAAGTAT 20779 33 100.0 33 ................................. TGAGGCTGTGTTGCAGAACCACGGCCTGCAGGA 20845 33 100.0 37 ................................. TTGTAAATCTGTGAAAGCGGCATCCATCCGCAATTAC 20915 33 100.0 34 ................................. ACCAAATTGGACCGCTGGTTTCGAAACCTAAGGC 20982 33 100.0 33 ................................. GACAATACCAGTGGGGACGGTGGCTCAGATGGT 21048 33 100.0 35 ................................. GCATAATCCTCGTTGGCCTTTTTGGCCCGCACGAA 21116 33 100.0 33 ................................. TCACAGCCAACGCGATGAGTCCATTGAGGGACA 21182 33 100.0 34 ................................. CCCCAGGCGGGTACCGCAATGGTATCCAGTCATG 21249 33 100.0 35 ................................. TTCGGAGGCATTGAAATGATATGGTATCTGCCAGA 21317 33 100.0 33 ................................. ATCCTAAATTAGGGGTGGTGCCGGGTATGCTGC 21383 33 100.0 34 ................................. ATAAAGCCTCCTATCAAAAAATAAGGCCCAGGGA 21450 33 100.0 33 ................................. ATCCAATTCTGCATATTACAATTATAAATCGTC 21516 33 100.0 35 ................................. AACTAAACAAAACTGACATTATTAGAATTTGATGG 21584 33 100.0 34 ................................. CGGAATCATCAAATACTGGTGCATCTACACTATC 21651 33 100.0 34 ................................. CTCTCCTTCCGGCCCTGTTGGAAGAGCCATTATT 21718 33 100.0 35 ................................. TGGATGATGTTCTTTTCAGCGGCGCCTGTATCATC 21786 33 100.0 34 ................................. CCGACAGCATTACTGTTTCCAGGCTGCCCGCCTT 21853 33 100.0 34 ................................. CACCACCCGAAATTCCAGGTCGTGTCTTTCCGTA 21920 33 100.0 34 ................................. CTGGAACGCCAAATGATGCAACACCCTTCCCAGT 21987 33 100.0 36 ................................. TTTATCAAAGGTCCAGCTGACATCTGAGATGGTAAA 22056 33 100.0 35 ................................. TAATTTACCGTCTTTGTTTACCATATAGCGACGAT 22124 33 100.0 34 ................................. GGCTGTGACGGCTCCGTCATCCCCGTACTGCTCT 22191 33 100.0 34 ................................. CCTGTCTCCGGGTCGTGTGGCACCAGGCAGTCCG 22258 33 100.0 34 ................................. CCTGTCTCCGGGTCGTGTGGCACCAGGCAGTCCG 22325 33 100.0 35 ................................. AGGTGGTCGATGCCTACCCGCTCCACGGCTGTGTC 22393 33 100.0 35 ................................. AAGATATAAAGAAAATCCCAACTTAGTAACTTTGC 22461 33 100.0 34 ................................. TGCAGGATGAGCGCCTGGACCTGGTGGTATCCTT 22528 33 100.0 34 ................................. TGCAGGATGAGCGCCTGGACCTGGTGGTATCCTT 22595 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 66 33 100.0 34 GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Left flank : AAGTCCTGGAATTTCCGGAGAAATGTGGATTTCTGGCAGTGGCCGGAACAGCGGTGGCCCTGAAAGCGGGAAATCTGGCAGCTGTAATGGAACGCCAGGGCAGGGTATTGCGCATTTACGATGTCAATGATAAGAAGGAAGTGATGGCGGAATTTGTCCGTGCGTTCAAGCAGGGAGCTATATATCCGGAACAAAAGAGGCTTGTTTTGAAAGAGTATCCGGCGGAGGCGGCAGAGGCACTGCAGCATGCGGGATATATGCGTGAAATGAAGGATTATGTAGTGTATAAGTAGAGTGTGATTTCTGTGAGGCGGAATCCCATCAAACCAGGTGCGAATGCCAAGCTAACATGAAATGTCCGGGAGATTCGCACCTGAAAAACAGAGGAAAAGCCGTGAAAATAGGCTGGGTGAATGGATGGAGGAGGTTGAAATAAGGAGGGGAGGACATAATGCATAAAAAGTTAGGGGGATGTGGAGGGATTGTTGGATAGTTTTGCT # Right flank : TATAACATGCTTTATATACATATGCTTTTCCTTTCCACCACTGCTGGATATGTGGTTTATTTTAGCTGGCCGATTTCGTGATAGGCCTCCAGAATACCATTTTTGGCTGCTTTTTATACAGTATCAATATCAACCCAATACCAACACTAACCCAATACCAACACTAACCCAATACCAACACTAACCCAATACCACCCCAATACTAACACCAATTCTTAATCATGCAGAACCATTAGGTAATTGCGAAACTCACTGATCAGAATTTATGCACATCGTATAGGAATGAATCTAAATTGAATATATTAAGCAAGATATTTTGTGCAAGGTGAATATAAAAATTCAGAGTTTCGCAATTACCTAATGCAGAACCATTTCTGAAAGGAGAGGGAAAAGCCATGAAACAGATGTCATTATTCGATGACAGAGAAGTATACAATCCCCTGGCCAGCAGGCTGCGTCCGGATGACCTGGATGGATTTGTGGGACAGGAGCATCTTTTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.00,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //