Array 1 120-1820 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADCKM010000012.1 Bifidobacterium pullorum subsp. saeculare strain DSM 108971 NODE_12_length_54922_cov_136.322837, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 120 36 100.0 28 .................................... GCTCAGGCCGTAGAAGTCATGAACAATG 184 36 100.0 28 .................................... AGGAGGTGCGATGGCCGACGAGTCGATT 248 36 100.0 28 .................................... CCTATCCACGGTATTGTAAAACTCTTCC 312 36 100.0 28 .................................... GAACTTCTACACGTACGCGCAGGGCGAG 376 36 100.0 28 .................................... TCGGCCAGCATGGCGCGTTTGACCATCT 440 36 100.0 28 .................................... GGCATCAGCGGCGCGTTCACCGGCGCGA 504 36 100.0 29 .................................... TCGTGGGTAGCCATGATGGGTGGCGCTTG 569 36 100.0 28 .................................... CGTGGGACCTCGTATCTCGCCGGCGTAA 633 36 100.0 28 .................................... ACGCCAACCACGGACGCTTGGAGGTTAC 697 36 100.0 28 .................................... GTTGACTCGATGTTGATACCGCTGACCT 761 36 100.0 28 .................................... GAGGCGACGATGTTCGACGCGACCAGCG 825 36 100.0 28 .................................... GCCACTGTCGCTCTCTGAGTTATTTGCT 889 36 100.0 28 .................................... GTGATCGTGGCCTCCTATGCGGTGCGCC 953 36 100.0 28 .................................... AGTGGGCTTGGCTGTCCGTCGGCGGCGA 1017 36 100.0 28 .................................... TTCGTGGTGCGGTCACGCTGTGCAGAAT 1081 36 100.0 28 .................................... TCGCTGGACCGTGCCGGTCAGGCACAGG 1145 36 97.2 28 .................................C.. GAAACCGTCATCTTCGACAGCATCAGGA 1209 36 100.0 28 .................................... TCGGCGTGCGACGCGAGTACGCGGAATG 1273 36 100.0 28 .................................... TTATAGTCATCGTCGGTCATTTCAACCG 1337 36 97.2 28 ................A................... ATCTCGTGGGACGGCCTGCCGGCGCTCA 1401 36 100.0 28 .................................... ACCTTTATCACCATATCGCGTTGCGCCA 1465 36 100.0 28 .................................... GAAGGGTTCGACGTGCCCGAAGGCGTGG 1529 36 100.0 28 .................................... CCCTTGCTGTACGGCATCAGGTGGTCGA 1593 36 100.0 28 .................................... CCATGCCTGCTCGAACGCGGCTATCGCG 1657 36 97.2 28 ..................T................. AAAGATGACAGGTCAAGTGAGGTGAGAG 1721 36 94.4 28 .....T............T................. CACTTCGTTCGCGTAGGCGCGGACGAGG 1785 36 97.2 0 ..................T................. | ========== ====== ====== ====== ==================================== ============================= ================== 27 36 99.4 28 CAAGTCTATCAAGAGGGACGAATGCTAATTCCCAGC # Left flank : CCGCCACCGGCCTCCCCGCACCATAACCCCGGCCTCCAAACACAATAACCAGTGGCCTCAAAAGCTACGAATATTCATGCTAATTCCCAGCTATCGTATGACGCAAAGTGTTTGGCAAAC # Right flank : CGAGGACTTCGGCAAGCATGCGGGCGACGCAAGTCTATCAGAGGGATGAATGATGTGTGTCTGAGGTTGATCGGTAAAGGAAACCTGGATCGTTGGGGTCGGGAGCCAGTTTAATTGGCGGCAGCGGGACTCCATTCGACATCGCGTCGATGGCCTTCTTGCGGAAGTCCGGATCGGCTTCGATGCCTCCATAGAGGAAGCTCACCGGATAATATTTCGAATCAAACGGGTAACATTCGCCGAATGTTTCATTGTAGGCTTCGGCGAGTTTGTCGTTGCTCAGTGCTTCCAGTTCTTCCGCGGTGCAGGGATTCTTCGTCATTGCGTCGCCTCCTGACCATTATGCCGACCAGTTTCGTGGTTTGATGGAATGCATTATCCATTATCTGTCACGCGTATTCGTTCATAAGCTGTGCCGTCATTTCAGTGAATATCTCACGTTTTGGTCCAAGTTTGTGCTCGGCGGACAGCTTTATCGGCTTGCCGTTGATATGTTCATT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGTCTATCAAGAGGGACGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //