Array 1 33994-30689 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPUG01000011.1 Eggerthella lenta strain CC7/5 D5 2 NODE_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 33993 33 100.0 34 ................................. ATGCCCGGTGACGCATCTCCCATCATCTCCGGCA 33926 33 100.0 33 ................................. AGGAACGTGAAGCCGCGCGTGAGCTTCGTCATG 33860 33 100.0 36 ................................. CTTTGATGCTGCTGGGTATCCCCTTGCCCTTCGCGA 33791 33 100.0 33 ................................. AAGCGCGCGGCAAAAGAGACAAGCTCATCCAAG 33725 33 100.0 33 ................................. GAGACGGTCGCCCGATCGTCCGATGACGGGGAG 33659 33 100.0 33 ................................. ATCACTCGCAGCATCTTGGGAAACCTCCTTTTC 33593 33 100.0 34 ................................. CGTCGCGTGGTGCATGGCGCGCAAACGCTGTCCA 33526 33 100.0 35 ................................. AGCTCCAATACCATTTTAAATTTTACTTCCAACGG 33458 33 100.0 38 ................................. AACGAACGCTCCGACATTGACGGCATCTCCCGTAGGGA 33387 33 100.0 35 ................................. TCCAGCGCGCTCATGATGGTGGCCCAGTCCATGGC 33319 33 100.0 33 ................................. TTCGCAGCCGCGCCTTTCGTGGCCATGTCTCGC 33253 33 97.0 34 ......T.......................... ACTCCGAGCGACTCGCCCGTGCGGGCGCTGCCGA 33186 33 100.0 34 ................................. TTGGCCGCTCATCGGTACAGACCAATCGCAGGAA 33119 33 100.0 33 ................................. GTTGTCAAGCTCTGCTTCGCCTCCCAGTCAATG 33053 33 100.0 33 ................................. GGCCAGCAGCGCGACGCAGCGCCTCATGGCGAC 32987 33 100.0 35 ................................. TTGTTTCGGCAGCACCAGCAGCTCACGCGGTCGAG 32919 33 100.0 33 ................................. TCGCCCGTCAAGCCGACCGGCGGCGAGGCCTTC 32853 33 100.0 34 ................................. TGGTGATAGATGACCTCGGAAAGGACGCGCCCAC 32786 33 100.0 33 ................................. CTGTAATGCCTGATCTGTTTGCCGATGTACTCA 32720 33 100.0 33 ................................. GAGAGCGCGGAGCATATGACGCAGTGCGTCTGC 32654 33 100.0 33 ................................. GTCAACGCCGGTGGCACGTGGCCTGCGTCCCTG 32588 33 100.0 32 ................................. ACGCGGCTGCCGTCCTCCATGCGCGCGTCCAT 32523 33 100.0 33 ................................. GAGACCGAAAGCCGCGATTCGTCGAGCATCGTC 32457 33 100.0 35 ................................. GCTTTCGTCTGCTACCTGCTCGTCAGGGATGCGCG 32389 33 100.0 33 ................................. CGCCTGCTTTGCAGGGTCTTGCAGATCGGCGGT 32323 33 100.0 35 ................................. TCCTTGACGTAGAGATAGCGAAACTTGCCGTAACG 32255 33 100.0 33 ................................. AACTTTATCACACTGTCTCGGCTCGATAGCTCC 32189 33 100.0 34 ................................. AAGCGCGGGATGCTCGTTGATCTTGTCTACTACA 32122 33 100.0 34 ................................. CGGCATGGACGGCGATGATCTTGTTGAGGGCGTG 32055 33 100.0 33 ................................. GGATGCGAACCAGAAGAGCTCTACGGTCTCAAG 31989 33 100.0 34 ................................. CATACTGTGAAAGGGGTATAGCCAGGTTCGACGG 31922 33 100.0 34 ................................. CGTCTGGTGATCTCGTCCATTCGATCTGCTCCCT 31855 33 100.0 33 ................................. CGTATCCCAGTACTACCCTGCGGTCGCTGGCGG 31789 33 100.0 33 ................................. TGCCATGCCCTGACCCCTTCAACGGTGGACATC 31723 33 100.0 33 ................................. CGACCTTGCGCGAGACGATGCCCGAACCGTCGG 31657 33 100.0 35 ................................. TCTCCGCTTTCGTCTCGCGGCCATTCCATCCCCGG 31589 33 100.0 34 ................................. CACGCACCCACCATGTGATAGCTGGTCGATCTGT 31522 33 100.0 35 ................................. ACGTTGACCTACGCTGAGAACATGCAGGACAATTC 31454 33 100.0 34 ................................. GTCTCTGCTGGAAGCCAATCGGTCTACATCGAAA 31387 33 100.0 35 ................................. GGGCATATCGGCATAGCATGGTACGAGGAAGCCGA 31319 33 100.0 33 ................................. AACAGAATGTCCTCGTCGTGGGCGCTGAAGCCG 31253 33 97.0 33 .....................A........... TGACGAGTATCGCCTATGGCTTGAAAGCGAGGT 31187 33 100.0 33 ................................. AAGCACACCACCAAGCAGACGCGCAGCCTCATA 31121 33 100.0 34 ................................. GTCATCTAGGACGTTGCCGGAAACGACATCCTGC 31054 33 100.0 34 ................................. GTGCCTCACCGGCCGGCACGTACGCTCGCGCACG 30987 33 100.0 34 ................................. CAGAACTTCGCGATGGCGAAGCAGAGCGGCTACG 30920 33 100.0 35 ................................. GTCCCCGTCGGCGGCTTGGTGTCCATGCTGATGAT 30852 33 100.0 33 ................................. TCGTCCTCGCTGAGGAAGTAGGGGTCGAGCGAG 30786 33 100.0 32 ................................. AAACGGTTGAACGATTTGCGGACGCTGGCGAG 30721 33 97.0 0 ................................C | ========== ====== ====== ====== ================================= ====================================== ================== 50 33 99.8 34 GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Left flank : TGCGCTGCGATCTAGACGGCTACCCGCCGTTTCTATGGAAGTGAGATGGTTGGCATGCTGACAGTGATTACCTACGACGTGAATACCGAGGATCCGGCGGGCCGACGTCGCTTGCGGAAAGTGGCGCGACATTGCGTCAATTACGGTCAGCGTGTCCAGAACTCAGTGTTCGAATGCGTTGCCGATGCTGCGACGATGGTTCGTATCAAGAGCGAGCTCGTCGAGCTGATCGATCCGGAGAAAGATAGTTTGCGATTCTACAGTCTTGGAAACAAATATGAGACGAAGATTGAGCATGTAGGTGCGAAACCAACGTACGAAGCTGAAGGGTTCTTGGCGTTGTAGGACCATGGTGCGAGCATGAAGCTCGCATATGACATACGTGAGGTTCGCACCAAATAGTGTGACATAAAGATGCCTGACGCGCTTGTTGCGTGTACCTTGTTTGTCTAATGACACTATATGTTGATCGAAGCAGTAAATTTGCACATAATATTGCA # Right flank : TGTTCGGGTTGGCTGGCAAGCTGAACGCTGACACGTCATCGTTCAGCTTGCGGGCGCGCGGGTTGAAGTCGCGAGCAGCTGTCGTGGTACGGCCGAGGCGTGGTCGGTCGTACCCCTCGCGGGCGCGCGGGTAGAAGCAGGGTATCCGGGTTGAAATCGAGCAGCGTTTCGGCAGGTTCTGTCGCTCTCAAACGAGGGGGTAACCGATCCTTGCCGTCGCTTCCTATCGAGACGCGGATTGATTCGCTGATTCCGAGTTTTGCTCGTCGGACGCCTGCGCCGAGTTGTGAAAGGCGCAGGCGTCCTTCGGATCGCTACTCCACCACCAAATCAACGAGCTCAAACGTCGTGCAGTCCACCAGCCCGCGATTCGTCAGCCGCAGCTCGGGCAGGCATGCCAGCGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCATGCGCCCTCCAAGGCATGCACCTTCTCGCTCATCGTCACAGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.20,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //