Array 1 39887-40845 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIYX01000006.1 Enterococcus faecalis strain 3MPH1 3MPH1_S11_L001_R1_001_contig_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 39887 36 100.0 30 .................................... AAAACAGTAACGACGCTTGCTTGTTCGCTT 39953 36 100.0 30 .................................... ACCATTTTAAACGCATTTTTGATTCCTGTT 40019 36 100.0 30 .................................... TAGAAACTACGATTGAACAACTAAAAGAGG 40085 36 100.0 30 .................................... TGAATTCGTCTATTTCTAAGTATGGAACGA 40151 36 100.0 30 .................................... AGAGGAACAGCTAGATGCTGCTTTGATTGG 40217 36 100.0 30 .................................... AATGTTAAGAGAAAATGAGGAACTCGCACT 40283 36 100.0 30 .................................... TAATTTCAAGTCATTCTTTTTCATAAAGTC 40349 36 100.0 29 .................................... CTGCCTACCACCCACGTTACGTTCAAATT 40414 36 100.0 30 .................................... TTGATAGAAGCCTGTCAGACCAGCAAAACG 40480 36 100.0 30 .................................... CATTAGATTTTGAACATGGAGCTAGTCCTG 40546 36 100.0 30 .................................... AATAAATTCAAATTTTCTCGAACTTCTGGC 40612 36 100.0 30 .................................... TGGAGCAGGTACTGTTTCGTCTGTAAATGG 40678 36 100.0 30 .................................... AAAATGATTGTAAGGAAAACTTTGATTAGT 40744 36 100.0 30 .................................... AGAAGCAAAAGAGAACATGATTGCCGTTTG 40810 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 15 36 100.0 30 GTTTTTGTACTCTCAATAATTTCTTATCAGTAAAAC # Left flank : ATTCATTATCTCTTTCAGCAGTTAAAGAAATTGGCTCAAGAAACAAAGCAGTTGAAGTTTTTTATTTTTAGTAATAGAAGCTTACCTTTACCGTATACGGAGGAAGATGTTGAGAAAACGATTTTGTTATATGATAAGTATCAGCAGTTGCCAGTTTTTGATGTTTTTCGTCAAAGTATCGAGCGACATTATCCAGATCAACTCTCTTGGACAAATCAACAACTAATTGATGCTTTTTATCGAGTCTGTCATTTTGTTGGGGATCAGTATACAAAAAATTATCTTTTACCTAAAGATATGATATTATTAAAATTGTTGAAGGAATTGCTAGATGACAATAGTGAGTGTGTCGAGACGTCGATGGAAAAGCTCACTGTGTTGGAAGAACAATATTTTCGCGAACGGTTATTGCGGAAAGATTGAGTCTGGAATTTTAACCGCGTAAAGTTATATTTTTTATCAAAAGGATTATTAATGAGATTTCAAATTTTAAATTTGAG # Right flank : CAATAAGGAAGTAGGTTGGATGTACGAACTCGCTTTTATACTCCCAATAATTTTCAAAAAAGCCATCCCCACTAAATTCTTAAATATAGTCATCTTTCTAGCATAATTATTTGTATCTGAAGCAACAGCCAAATTGGCTTCTTCAGATACTTTTTGTTATTTAATTTAAGAGTTTTCTCAGTTGTACCAACAAATTGATAACTTATAATTTTCAAGTCCTACATATAATGGTAAAATAGAATGGATTGAAATTAATTGGAGGAATAATGAATCGATGAAAAAAAGATTGCTATTATTTATTGGTTTGGCAAGTATACTTACTTTGACAGGATGTGCAAAATGGATTGATCGTGGTGAATCCATCACAGCGGTAGGCTCATCAGCTTTACAACCATTAGTAGAGACAGCGAGTGAGGAATATCAAAGCCAAAATCCGGGAAGATTTATTAATGTCCAAGGTGGCGGAAGCGGAACAGGTCTGAGTCAAGTCCAATCTGGCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAATAATTTCTTATCAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //