Array 1 27501-25292 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOTG01000010.1 Mycoplasma ovipneumoniae strain TC3 contig10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 27500 36 100.0 30 .................................... TTTTTTTCCAAGAATGCCATTAAAAAGTCT 27434 36 100.0 30 .................................... TGCTCGATTGCTTCGTTGGTATAAGTTCTA 27368 36 100.0 30 .................................... ATAAGTCCCTTAGAGTAAAACAGTCGCGGT 27302 36 100.0 30 .................................... TAATTGGTGGTCTTTGTCGACCACATAAGC 27236 36 100.0 30 .................................... ACAGAAGGTGAGGCAAAAACTGTGGCAAAA 27170 36 100.0 30 .................................... AACAAAAAACAAGACTAAAATATACTAAAT 27104 36 100.0 30 .................................... TGCCTATGGTGTAACACTAACACCCCAACA 27038 36 100.0 30 .................................... TTAGTAGGGTTATTTTGTGTCTTAATGATA 26972 36 100.0 30 .................................... GATAAATTCATCGACTACTGATACAAAATT 26906 36 100.0 30 .................................... TTTTTAGACGAAAAAAATAAAATTGTTGTA 26840 36 100.0 30 .................................... TTGGGCAAGGGGTGAGTGACGGTCAAAGGG 26774 36 100.0 30 .................................... AAAAGGAGGTTTAGGTTCAAAAAATGTTCT 26708 36 100.0 29 .................................... TTCTTAAATAATTTACCATCATCGGTTAG 26643 36 100.0 30 .................................... CTTTGAGAGTGCTTTAAACAATTCTAAAAG 26577 36 100.0 30 .................................... ACTTTTAAATATCTCTAAGTCCCCGTAAGG 26511 36 100.0 30 .................................... CATTTGCTTAAAGATTATACTGGAATTATT 26445 36 100.0 30 .................................... ATGGTTTATATCATATTAGCAAGTTTTTTT 26379 36 100.0 30 .................................... TTTTTTTGGCAAAGAAAAAACGCCCAGAAC 26313 36 100.0 30 .................................... GTCCAACGTCAATTGAATTTGTTAGTGACC 26247 36 100.0 30 .................................... GCCAGTATAGTCCTTTAATAAGTGCCTCTC 26181 36 100.0 30 .................................... ATTTTTATAAACACTCTTGCAGCGGCCATC 26115 36 100.0 30 .................................... TCTTCATGATATAAAATTTAATACAAATAC 26049 36 97.2 29 .....................A.............. TTAATAAGTTTTTTCTCGACTAAAGTATC 25984 36 100.0 24 .................................... TTAAATCTATTCCTGTTACTTCGC 25924 36 88.9 30 .........T...G.......G..G........... AGTCTTTTGCTCGAAAAAATACAACTCTAA 25858 36 94.4 29 .........T...G...................... CATCTAACCCACATAAGAATCTAATTTTT 25793 36 88.9 30 A........G....T....................T GTAAAAATTATTGTCTAAAAAATCTATATC 25727 36 100.0 26 .................................... TGAATTTGATTTTTTTCTGATTTTTT 25665 36 97.2 36 ...................................T AAAAATTTTTTTCTACTTTAAATATAATTATAAGTA 25593 36 100.0 30 .................................... TGAAGAATTAGAAACTCAAAGCAATAATAT 25527 36 91.7 33 .........AC..................T...... GAATTTTTTTTTTTTTTTTTTTTTTGATTTTTT 25458 36 86.1 29 ........A.....T.....T...G.....C..... TACCACTCTACTTATAATATATTATTATA 25393 36 91.7 31 ........TT..............G........... TCATATAACTAATTATACCATATTTTCAGTG 25326 35 83.3 0 .......CT..-...........G..........CT | ========== ====== ====== ====== ==================================== ==================================== ================== 34 36 97.6 30 GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Left flank : TTTAAATTATGAAATTGATAATGTAAAACTAATTAAAGCAATTTTTAACATCGAAAATGATATATTAATAAATGAAGAAAACTTTGAGAATCTAGCCGAAATTATTTTTAGTACAATGAAACAGACAATTGTAATTCTGAAAGATCTTGATTATATAAAATTTGAAAAACTGTTTAAATATAATAATATAACTTTCCTAATTTTGACAAATGATTTTACAAAATATATTTCCAAATTTAGCGAACTTGAATTAGTTGCTTTTTATTCACAGAAAACTGTAATTGATGTAATTGATAATTTGCCGATTATTCGTTATTTTGAAAATCTCAAAAATCGTCCTGTCGATGAAGATGAGCTAATATACACTTCTGAAGAAGAGAAAATGGAAGCAAAAATGCATTTTTACAAAATAAAAACAAGTTTTTTAAACTAAAAACGTTTTTATAATTGATTTTTACACTAAAAAATCAAAAAAAATACCTTTTTTTCTTGGAAATGAG # Right flank : ACAACTTAAAAATATAGTCGAAAAAAACTAGGAGAAAATTAAAATGTCAAAAATTATCGAATTAGAAATTAAAAATTTGTCTAAAGAAGACAAAAAAGAATTAATTGAATATATAAATAAATTTGGATATAAAAAAATTGATCCAAAAAATTCAGATAAAGAATTAGAAGCTTATTTTCAAGACTATCCCACTGAATTTATTGCTTTTCAAAAAGAATATAAATACAGCCTTTATAACCAAGCAATTAAAGAACATGGTTTTAAAGATTTGACTTATGAAGACATGATAAAAAATCTAACACCTGAACAAAAAGAAAAAATAGTACGTGACATTAGTTCAATGGTCAAACGTTTAAAAATGGGTCAAATATTTAGAATTAAAAAGGATGAAAACGGTAATTATTCTTTTGAAGATCCTTCTCTTGAAAATGAAAAAATAGAAGACATGAGTGAAGAGGAAAAATAAGTTTGAGAGAAAATAAAGTAGAGAGTATTTAATG # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [28-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //