Array 1 59692-62087 **** Predicted by CRISPRDetect 2.4 *** >NZ_VULQ01000011.1 Anaerococcus porci strain WCA-380-WT-2B seq11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 59692 32 100.0 34 ................................ GATGTATTTGATACATGTTTTAGACATTATGATA 59758 32 100.0 36 ................................ AAGGCTAACCAATACAGACACAGATACAGTTAGGGT 59826 32 100.0 35 ................................ TTACAGTCTTTGGTGGAAATGAAGTTAGGGAGATA 59893 32 100.0 35 ................................ CACAAGCCACACATAAAAGCTTACTATTACAAATA 59960 32 100.0 34 ................................ CGACTTTTGGGCGGATTGGGATAGACAATACGAA 60026 32 100.0 35 ................................ ATAAGCACCAGTATGAATTGACCCATCAACTGCAC 60093 32 100.0 35 ................................ TCAAAAGATTTTGACCGATTTTACCAGTTTTACCA 60160 32 100.0 36 ................................ TGATTGGGTTACTGGGGAAGTACTACCAAGCATAAG 60228 32 100.0 36 ................................ TCTGTCATTGTTTTATCTCCTAAATATATTATTTAC 60296 32 100.0 38 ................................ TAAGGGTGGTAAGCCTATTGAAGATATGGTTAGTAGAG 60366 32 100.0 36 ................................ ATCAAGTTTTATAGTTTTTTCCCTTTTCATTCACGC 60434 32 100.0 38 ................................ TTTTATCCTTTCTTCCAAAGAGCTTAAACTATCACTTA 60504 32 100.0 35 ................................ TATCATAATTTTTCCCTGTTATGTTGTTATATGGG 60571 32 100.0 35 ................................ ATTGTTATTGTCAAGTATCTTAAAATTATCTCTCT 60638 32 100.0 38 ................................ TTTGCTCAGCATCGCAAATTGGGTTATGAGATTATTTT 60708 32 100.0 36 ................................ GTCAAGGGCTTTAGTACCTTCTAAAACTGTATCGGT 60776 32 100.0 37 ................................ CTAAGATTGATATGTGGTCTTATGGTATTGATGATTT 60845 32 100.0 34 ................................ ACATTTATGAATGATGGGTTTTGTGATTTAGAAT 60911 32 100.0 35 ................................ AATCCACAGAGCCTTGCACTCTGCCGCCTAAATTG 60978 32 100.0 34 ................................ ATCTTTGGTAAATAGTTCTTTCTTGCGTTTTTCT 61044 32 100.0 34 ................................ TATTAGGAAAAAGATTAGGTATGGGGTGCATTAT 61110 32 100.0 35 ................................ TGCTAAATTAGCATAACTTAAATTCGCTTTTTCAC 61177 32 100.0 35 ................................ TTTCTCTGAAGATATTGAATCTCTATAATATCATT 61244 32 100.0 34 ................................ ATCACAATCTTTTAACGCTCCAGTATTATGTAAA 61310 32 100.0 36 ................................ AAAACCTAAACTATATTTATAAGCAAAATTTAATAT 61378 32 100.0 39 ................................ AAAATTAGCTATTACATTACGATTTTCTTTCTTAATTAA 61449 32 100.0 35 ................................ TTTTTTTTGTCTCCTTTTATCCAATTTATCATATA 61516 32 100.0 38 ................................ TCCTAACTCGAAATACTCTATTAATGTTATTAGTTTAT 61586 32 100.0 35 ................................ ACTTGCAAAAAATTCACTTTTACCATTAATTTTAT 61653 32 100.0 38 ................................ ATGCTATTGAGTCTAAGGTTTGGGAGAGTAAGAATAAG 61723 32 100.0 34 ................................ TCCACCATTAATAAATCATTTACTACCTTTAACA 61789 32 100.0 35 ................................ ATGTAGGTAAAACAACAGTATCTAATTATGAAACT 61856 32 100.0 34 ................................ CAAAAAGAAAAGTCCCGGTTGTTGTTATTAAATT 61922 32 100.0 36 ................................ AAATTTGGAGCATGTAAAATTGGATAATGGTAACTT 61990 32 100.0 34 ................................ ACTATTACAGAAAATGTTGATTTTAGCCCTTTTA 62056 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 36 32 100.0 36 GTCACTCCCTTCATGGGAGTGTGGATTGAAAT # Left flank : TACTAGCACATGTTCAAGCTCAATTATTAAATAGCTACATTAGAGGAGATATAGAATCCTACCCTCCTTATATGAGGAAATGAAATGCAAATATTAATAACATATGACGTAAAAACATCAAGTAAGGGTGGAAGCAGAAGATTAAGACAAGTTGCAAAAATCTGTACAAACTATGGACAAAGAGATCAAAATTCAGTATTTGAACTTAATATATATCCTGCAGACTTGGTGAAGATAAAAAACAAACTAGAAAAAGTGATAGATCTAGAAGAAGATAGTATAAGAATATATAATTTGGGGAAAAATTGGGAAAGAAGAGTAGAATCTATAGGAAAAGATGAAGCCTATAATCCTGAGAAGGATTTATTAATAATGTGAGAAGTTTGGCTTAACATAAAAATATTAAACATATCTCATAAAAAACTTTATATATATTATAATTTTAAGATTATAATGTATTCTTGCAGATAAGAAGGCTCGAAGAATGCCTGAAATCTGCA # Right flank : TTTTTGTTTGTTGTATGATATTTTTTAAAAAATCATCTATATTTAATAAGAAACATATGATATATAAGAAAAGTATTATACTATATAGTGAAAGATAAAATATTTAGTCTTAGCTTTAAACTGTAAAGAATAGTATTAGGTAATTAGTAAGCTAATTTTGTATAAAAATAATTTTAATCATCAAATTAAAGGCAAATGAAAAGATATTTAAATGACTTATTCCTCCTTATATAATAAATTAGGTTGTTAAAGGTAACCTATAACCCTTTAATTACTTAATATTATTCAGTTTAGCTGTATAATATTTGTATTAGATAGAGGCACTCGTTTTCTCCTTGAGATTTTATCTCGTAAAAAAGAGTGAGTCCTCTTAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCTTCATGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.70,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [66.7-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //