Array 1 963147-963294 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026378.1 Mixta calida strain DSM 22759 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 963147 28 100.0 32 ............................ CGTCACGCCTCACACGTTCCGACACAGCTACG 963207 28 100.0 32 ............................ ACTGGCCGACATTGCCAGCATGAACATCAAAC 963267 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 3 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GGACTTGCTTTCGATATGAATAAGCCGATGTTTGCCGTGAAACAGGGACAGCTGGAGAAATGGACCATTTCCGGCGAGGGCGACAGCATGCTGCATCCTTTCCATATTCATGGCGCGCAGTTCCGCATTCTTACTGAAAACGGCAAGCCGCCAGCGGCGCATCGTCAGGGATGGAAGGATACGGTGCATGTAGAAGGGTGGCGCAGCGAGGTGCTGGTGCGCTTCAACCATCTGGCCGACGCGCAGCATTCCTATATGGCGCACTGTCATCTGCTGGAACATGAAGACACCGGGATGATGCTGGGCTTTACCGTGGCGTAACAGCAAACTGGCTGATGTCTGCAGGCTGTATGAGCAGGCTAAAGCGCAAACCCTTTTTTTGACCGTCCTTTTAAATGTTTGATTTTAAATAGCAGACAGAGGAAAGGATAAAAAAGGGTTTGCATAGGAATTGTGGCGAAAGTCATTTATCGCTAGTGAGTTACGCTTTAATATCAACA # Right flank : ACGATGAAATACGTTGCACCGCTAACAAAAGATTCCAATAACAGAAGTCGATCGATATATTCTACACATTAACTTTATAGTCTTATCTACCACGTAGCCATTAAATAATTAAGGGACTAATTATGTTAAGTAAAAAAATTCGATATAGCTGGCTGGTCAGCTATTGCCTGGGGTTTTATATCATTAGCCATAACTCGCTGCGCATTGTGTCGCCGTGCGGCGTAGCCATCGATATGATTTCCGCACTGCTGATATTTTTAGGAATTAATAAAACCTGTTATTTATTATCGGACTTTTATAACTGGTATAAAGGTAATAACGTTAAAAGTAACAGTAAAGCGCAACAATAATTCATTCGCTATCTTAAAGCGTAAAAAGGGCGGGTCTGTACCAAACGCCGCCCCGTCAATAAATGCGTTACGCCTGTTCCAGCGCCAGCTTCAGGTCCTCAATTAAATCGTCGCTGTTCTCAATGCCGATCGACAGACGAATCGTTGCTT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1071994-1072200 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026378.1 Mixta calida strain DSM 22759 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1071994 28 100.0 32 ............................ CGATTCGCCATGTAGCCATTAAATACTACTGC 1072054 28 100.0 32 ............................ TCATTCGGCAGCTGCCATTGGCTCAAACCGAA 1072114 28 100.0 32 ............................ CACTCACGGTCGAATCCGGGCATAACAGGAAG 1072174 27 92.9 0 ...........C............-... | ========== ====== ====== ====== ============================ ================================ ================== 4 28 98.2 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GTTTGCCGACAGCATCGGCTACTGCGGCACCGAACTGATCCGCCGCACCGTCGGTATGTCGCACGTTGCGGATATGAAAAACATCCCCGATCCGGCGATGCATACTGAATGCGTGCACCACGCGATTGGGCTGGGCTGGGCGCTGATTGTCGCCGCACCCAATATCGATACCGTCGATACGCTGATCGCCCGAATTCGCCAGCACGGCTAAGTTATTTATTTGATAAGCGCGCGTCTCGCCTGCCAGCGAGGCGCGTTTTTTATGGGCGCGTTATCCAGGTTTTAGATTGGCTGCGCCTGTTGTTGGTTGGAGGGCGTGTCTGCCTGCGGGTGGGGTGGACCGGTAAGGCATCACGCGTTAACAAAGAGAACCCTTTTTATTAGTGCCACTGTAATTAATTGATTTTACAGGAAAGAAATTAAAGGGCAGAAAAAAGGGTTTTACGGCTGAAAAAGCGGTATCTGTTTATTTTGTAAAGGTTTTGGGGTAGATTTGAACG # Right flank : ACCCCCACATCCCCTCCAATAAAAAAGGCCTGAGCATAAACACTCAGGCCTTGCGTGCCGCGCCGTTGAACATCCGGTCTCCCACCTTCCTTCGCAGCGCGGCGTGTTGCTGCTTCGTCTTTTTTATTGGCCGTCAGGCGGCTTCGATTTTACGAATCTCGGTCTGCTCCTGCTTTACCGGCTGGGTCGCCAGCGCATCCGGCTCAAACTCATCCACGTTAATCGAACGCAGGCGGCTCACTTCGGCGCGTTTCAGCACCTCTGCTTCCTGCGCGTTAATCCAGCCTTCCTGTAGCGCGCGCTGCGCCAGCTCGTCAAGACGGGTAAAGGACAGATGCGTTTTCAACTGCTTGTTGAGACGATCGTGAATCACTTCCGCCGCCATTACATCGTGCAGCGCAGCCTCCAGCTGTCCGGCCGGGTTATGCTCGCTCGGCGTCAGGTATTGACCGCGACCCAGACGGGAACGGGTGGCGGAGGGCGTTTGCAGTAGCTTCGCC # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //