Array 1 27813-26061 **** Predicted by CRISPRDetect 2.4 *** >NZ_NBBD01000023.1 Limosilactobacillus reuteri strain JCM 1081 Ga0133912_1023, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 27812 36 100.0 30 .................................... TTGAATATACGTTGGTCTTACCTGGTCATA 27746 36 100.0 30 .................................... AAGTAGAAGTTGACGGCTACAAGTTTGATA 27680 36 100.0 30 .................................... TCTTGTCGGATAAGATGATCGCTAAGTATG 27614 36 100.0 30 .................................... TATTTTCTATGATAAACTTTTCAGTGATAT 27548 36 100.0 30 .................................... TGAACTTGAAGTAAATACCACGTGCTCTTT 27482 36 100.0 30 .................................... TCCCGCTTTTTCGTCATCGTCCTCAAAGTT 27416 36 100.0 30 .................................... CCACCGATGAAGCTCCAGTGAAATTCATAA 27350 36 100.0 30 .................................... AAGCATATTTCAAAAGTGAACCTAATAATA 27284 36 100.0 30 .................................... ATAAACTCTGGTTTATGTGGCATTAAGCGA 27218 36 100.0 30 .................................... ATTTAAAAGTTGAAATGATAAAAGACGGGA 27152 36 100.0 30 .................................... TGGTCGAAGAGATACTAATCATCTACACAT 27086 36 100.0 30 .................................... AACTTCAAGGTCAGATTAAGCAGTTACAAG 27020 36 100.0 30 .................................... AATGCACAACAAGTTTAATCGTGAATTACA 26954 36 100.0 30 .................................... TATTGGAGGAAATTATAATGCACGTGAATT 26888 36 100.0 30 .................................... ATCGAACATCAAGCGCAACGAGCAGTGGAT 26822 36 100.0 30 .................................... TAGAACAGCGCATTGGTTCTGACACGTTAG 26756 36 100.0 30 .................................... TAGAACAGCGCATTGGTTCTGACACGTTAG 26690 36 100.0 30 .................................... AAGACTACTTAGCAGGAAGAAAGCTAAGGC 26624 36 100.0 30 .................................... AACTTCCTCAATAACTTAGTCGCAAACGCT 26558 36 100.0 30 .................................... ACAGCTACTCATGCACTAATTGATTTAATG 26492 36 100.0 30 .................................... TTGCGGATATTATAGTCATCCATTTTGTTT 26426 36 100.0 30 .................................... AACATTCGCTGCTAATAAACTTCCGGGCCA 26360 36 100.0 30 .................................... AAGTCCAAAGGTGATAACTAATGACTGATA 26294 36 100.0 30 .................................... CCGCTCTGGATTTAGTAGGTAAGGGAGCCG 26228 36 100.0 30 .................................... TGTACCTACAAGCTACTGCGGCGGCTGTTT 26162 36 100.0 30 .................................... CGTTAGATTCGGCAAAACGTTCAGCAATAC 26096 36 91.7 0 ........................G...A......T | ========== ====== ====== ====== ==================================== ============================== ================== 27 36 99.7 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : GAATAATAATTTAGCTACGATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTATTAGATGCTGAAGCACGTCGACTTTATTCGAATGTTCAAGAAATTTTATTTATGACGGATTTACCTCTCGAAGTTCGTTACGATGGTGACATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGCCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATGGTTCATGTATTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAACTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAAATACTATGGAAATGCGGATTTTTATTATATTGACAAGGATTTTGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG # Right flank : AAATATTAGTCGAATTCACGGCTGAGAAAAATTTTAAATATGCTTCAAATTTCCCCGTCAACTTCAGCGGGGTTTTTTCATTTTCTTTTCAAACTAGTGTATAATATTTACTAAACCCATTACTAAAAGAGGTGAAAATGATGGCGACAATTAAAGAAATTGCGGAAAAATCAGGATATTCACCAGCAACAGTATCGCGCCTTTTGAATAATGACCAAAATTTATCGATCAGTCCAAGCACCCGCAATAAGATCATGACGGTGGCTAACGAGCTTGGCTATTGGAACAACCACAAGAAAAACTCTCAGCAGCAACCAATCCGTCCTAACCTCGCATTATTGTATCGGGTAAGCGGTAAAGAACAACTGCAAGATGAATATTTTGCGTTTTTGCGCAATGCAATTATTAAAGAAGTCGACGAGGTGGGAGCGCAAGTTGAAATCTTTAGTAATATCAAAGATTTAATTGCGGCGGCTGATTCGTTCCAAGGATTTATTGGC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //