Array 1 608799-612969 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXBN01000001.1 Methanohalophilus portucalensis FDF-1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =============================================== ================== 608799 37 100.0 38 ..................................... AAGAGGATCCTGATTTACTGGAAGAAGAAGTGGCTCCA 608874 37 100.0 36 ..................................... GTTTGACATATACACTCAGGAATTTCGGATACAGGC 608947 37 100.0 37 ..................................... TCCATTACATAATCTGCAAGGGTTTTTGGTTTCAATC 609021 37 100.0 36 ..................................... AACATGGAATTATACTATTAAAACATGGAATTAAGC 609094 37 100.0 36 ..................................... CCAGAGCACCGAGATAACTGACGGTACTGGAATGAT 609167 37 100.0 36 ..................................... TGATCCAGTGGTATGCATCAATCGGATTGAATGACA 609240 37 100.0 38 ..................................... TGTCTGCAACATATATATACCTTGTTCCTATTACCAAT 609315 37 100.0 38 ..................................... TCAGGGGCTTTGAAGTTGAAAATAGATTTTGCATCTAT 609390 37 100.0 37 ..................................... CTGTCCGTAGCGGCCGGTGCGGCGGCTGTAGGATATG 609464 37 100.0 36 ..................................... TGTTCCTCTGGGCTGGTGGCTTCTGTCATAACCTTT 609537 37 100.0 36 ..................................... TTTCATCAGATGCTGTGTAGAACTTCCACGATTCAT 609610 37 100.0 35 ..................................... CAACATCGTTGGATCGCATGAAAACAGTTAAATCC 609682 37 100.0 36 ..................................... CATCTATACAGATTACAAACAGCCTTACAGGATTTC 609755 37 100.0 35 ..................................... TAGAATTCCTTTGCTTCATTGACAAACTGGCGAAA 609827 37 100.0 38 ..................................... CTATTTATTTTGTTATGGCTGTCACGCAATGCGGCAAA 609902 37 100.0 35 ..................................... TCCTCTTTGTACTTGTAGTTCAAGGATTCTTTCTT 609974 37 100.0 46 ..................................... TGCATAGTCGAAGCAATATGGATATACTTGCTCAACAAGCAACTCA 610057 37 100.0 38 ..................................... CAATCTTTTGTTTCCTTCGCCGAGGGAGCAAGGGACGC 610132 37 100.0 35 ..................................... ACGATTTTGTAGCCGTATATGACGGATGCGGGTTC 610204 37 100.0 38 ..................................... GATACACAGAAGAAGGCCTCCGATGTTGCCACAGCTGT 610279 37 100.0 37 ..................................... CTATCTTATAATACTTGGTTTGCCGTTCTTTATGTTG 610353 37 100.0 38 ..................................... TTATAGTGTCGGTGCTATAAGCTTAAAGTTATAAAATT 610428 37 100.0 37 ..................................... TAGTTTGCGTTGCCATGGAAGGGTTGTAACTCATCTA 610502 37 100.0 37 ..................................... TCTTCAATAGTTAAATAATATGGTTCACCATCAACAT 610576 37 100.0 37 ..................................... CATATGCATCTACACCCTTTTGTTGAGGGTATAACGG 610650 37 100.0 32 ..................................... CTCTCTCCAATTGTTTTGAACGTCTTGCTTCA 610719 37 100.0 36 ..................................... CCGCATACTATACACATTTCACTCATGGTTCTCTAT 610792 37 100.0 36 ..................................... CAAGGTTCTCCAGTTTCTTGCAAAGGGTAATATACC 610865 37 100.0 37 ..................................... ATAAGGTCCTCCATATCTTCTGATATATCCACATCAT 610939 37 100.0 35 ..................................... TTAAACGGTGACTGTCCAAGAAAATCCACGTTCAA 611011 37 100.0 35 ..................................... ATCATGTAATGTCTGGTAGAAAATTAGGACATAAG 611083 37 100.0 36 ..................................... AATATATCGGCAGTATGTGAGCAGGCAATTCTAAAA 611156 37 100.0 37 ..................................... CCTGTCGTTTAAGCGGATCGCACATGAGGAGCTCGAA 611230 37 100.0 40 ..................................... TTCGGGTAGGCAAGAACGAACTGTATTATCTTGCTCTTGA 611307 37 100.0 35 ..................................... TGTGTTCATGACTGTCGTTGATGCTGACGGTTCTG 611379 37 100.0 45 ..................................... TCCGAATTCTCCAGGCTAACTCTTGCATGTAATATACAACGACAA 611461 37 100.0 36 ..................................... CTTATTATGGTATGTCTCCAATACCTGTTGTATCTT 611534 37 100.0 34 ..................................... TTCAGACTCTCAATACATCAGGTGGTGGCTCAGT 611605 37 97.3 35 .............G....................... ATCAATATTCAGGCACAATGGAAGAGCGTATTAAT 611677 37 100.0 37 ..................................... TCTTGCTTTCTACATCTTGTCTGGAATGGGTGTGTTG 611751 37 100.0 37 ..................................... CAGAATGCCACATCATTTCTGATACGAGGCACAAGTG 611825 37 100.0 34 ..................................... TTAATTGCTTCAGAACCTTCAGCAATTACATGGA 611896 37 100.0 35 ..................................... TTTGTGTTCTTCCCATGTGTGCATCTCTCCGTCTC 611968 37 100.0 36 ..................................... CCGCATACTATACACATTTCACTCATGGTTCTCTAT 612041 37 100.0 36 ..................................... CAAGGTTCTCCAGTTTCTTGCAAAGGGTAATATACC 612114 37 100.0 41 ..................................... TTTATCAAGTTACAAATCATATAAGGATGAAGTCCGACAAG 612192 37 100.0 38 ..................................... ATGAGTATGGGATCGCGATTTTTTGCCACAAACAAAAA 612267 37 100.0 41 ..................................... TTTATCAAGTTACAAATCATATAAGGATGAAGTCCGACAAG 612345 37 100.0 32 ..................................... ATGAGTATCAACAGATATTTGTTAATAACAAT 612414 37 100.0 36 ..................................... TTAATCTGTTCTTGCTTCCCCTCGATCTCCTGACGC 612487 37 100.0 47 ..................................... GTCTAAGCATGGTCTTAAGCATGGTCTAAGGTTAGTTTAAGCATGGT 612571 37 100.0 35 ..................................... ATTGGTACAGTAGCAGGATTTCTAGCAAAAAGGAG 612643 37 100.0 35 ..................................... ATTGGTACAGTAGCAGGATTTCTAGCAAAAAGGAG 612715 37 100.0 35 ..................................... ATTGGTACAGTAGCAGGATTTCTAGCAAAAAGGAG 612787 37 100.0 35 ..................................... ATTGGTACAGTAGCAGGATTTCTAGCAAAAAGGAG 612859 37 100.0 37 ..................................... CATCTATACAGATTACAAACAGCCCTACAGGGTTTCT 612933 37 97.3 0 ..................................G.. | ========== ====== ====== ====== ===================================== =============================================== ================== 57 37 99.9 37 GTCAAAATTCAATATCCACTAAAACAAGGATTGAAAC # Left flank : ATCTAAAGAAAGAAATGTTTTTGTTGCTTCAAAAGAGAATCACATTAAAGGAATTGTTGATGAAGTACTGTTTCTCGAAGATGGAACAGCTGCGCCTCTTGAATATAAGTTTGCAGAATATAAAGACAAAGTTTATATGACTTATAAATACCAGCTTTATTTGCAGGCATTGATGATCTCCGAGAATTATGATGTAGAAGTCAATAGAGCTTATATTTGTTATACACGAAGTAATAATATGGTCAAGTCTATTAAAATTGAACCGGAGGATGTGGATGAAGCCATAAAGATTGCCAAAAAGACAATTGATATAATAGAAAAGGGAGTATATCCAAAGGCAACAAAGTATAAATCCAAATGTATTGATTGTTGTTATAGAAATATTTGTGTATAATTCTTGTATTTATAAGGGATCTGATAGAAATGGTTCAAGAATTGAGATGCTTGAAAAGGAGGGATATTAGGGCTTCTTTTGGACAAAAAAGGGTGAAAGTTGTGCT # Right flank : CTATAATATGAAATAGTAAATTATACAATATAGGAGAATACCATGACCAATGCTAATGAAATTATAAAATATCTTGATATGAGCAAGCACCCTGAAGGTGGGTATTTTAAAGAAACTTACAGATCCGGGGAAACGATCAAGCACAAATACCTACCAAACAGATTTACCCTGGATCATGCATTTTCCACGGCAATTTATTTTTTATTGAAGAAGGGCGAATTCTCAGCACTTCACACAATAAAACAGGAAGAAATCTGGCATTTTTACAGTGGGGCACCCATTGACATACATATGATTCATCCAGATGGCGATTATGAATCGATCCATCTGGGAAACGACATATTGAATGGTGAAGTACCACAGGGTGTTGTCCCTGCAGGTTCAGTCTTTGGCGCAACAGTCTGTGACAGTACCAAATATGACTATTCTCTTGTGGGATGTACGGTTGCACCAGGTTTTGAATTTGAGGACTTTACCCTTCATAAGAAAGATGAATTACT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAAAATTCAATATCCACTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA //