Array 1 8997-10547 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFJT01000035.1 Anaerofilum sp. An201 An201_contig_35, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 8997 32 100.0 34 ................................ TGGGGAGGTGGACTAACCATGCAACTGACCAAAG 9063 32 100.0 33 ................................ AAAGAATACACCACCACGGTATTTAAGGCGAAG 9128 32 100.0 33 ................................ TGACCCGGACTATCAAGTAATGCGCAAGTTGCA 9193 32 100.0 35 ................................ CTGTCCGGCGTTGCCGCAAGCGTGACTAACGCTGC 9260 32 100.0 34 ................................ AATGCATACACGCGAACCAAATATGACACAAGTC 9326 32 100.0 34 ................................ TAGATGCAGGGAATGTGTGCGACCCGCAGGACGA 9392 32 100.0 33 ................................ GATATGGCATCAATTCTCCAGCCGTTTGGGGTG 9457 32 100.0 34 ................................ GTAACGAAGATGGGTATACTGGTATTTTGTCTCA 9523 32 100.0 34 ................................ CAGCTCCTCCGCAAGCCTGATGGAAAGGCCATCA 9589 32 100.0 34 ................................ ATACCGGCCGAATCCGACGGTTCCGGGCCGGCCG 9655 32 100.0 34 ................................ GCGGGAAAATCTGCCGGAAAGCTGCCCATCGGCG 9721 32 100.0 34 ................................ GGACAAGCCGGAGGCCAAAGCCTTCAAGCGCTGG 9787 32 100.0 36 ................................ TGCAGATCTTCATGGACAACTTCGCTGGCGTGGACA 9855 32 100.0 36 ................................ CAGCCATTCGGGGCCGAGTTCCAGGGTGGCCTTGCA 9923 32 100.0 35 ................................ ACAACCATCGCCATCATGACGGGAATCCCCGGATG 9990 32 100.0 34 ................................ ACTATGTGCGAGTGGACAGCTCCAGCATCATCCA 10056 32 100.0 33 ................................ CGGCTGGTGCTGGACAAAGCAGAACTGCCCGAA 10121 32 100.0 34 ................................ GTGCAGGGCCGCCGGAATAAAGGCTGCATCAAGG 10187 32 100.0 34 ................................ GCAGTGGGAGCCGGGAAGTGTTGGCACCGCGTCC 10253 32 100.0 34 ................................ GGTCATCCACTCGCCCCACAAAATCCACCCAACG 10319 32 100.0 34 ................................ TTGTCCATCTGCCGCAAGGCTTCGTCCATGCGGC 10385 32 100.0 34 ................................ TGCGCCTTCCAGTGCACGGCTTGTGCCGGTGCGA 10451 32 100.0 33 ................................ GAGATCCTTGAGGACCTTGACTTGACAGGGCGG 10516 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 24 32 100.0 34 GTCGCCCCCTACGCGGGGGCGTGAATTGAAAT # Left flank : GGTAGTGTATGCTGGTGCTCATCACCTATGACGTCAACACTGAGAGGCCTGCGGGTCAAAAACGCCTGCGCAAGGTCGCTAAACTCTGCGAGCGGTACGGCATTCGGGTGCAAAACTCGGTGTTCGAAGTATTGCTGGATGCGGCACAGCTGGAAGTGCTGAAAGCTGGTCTTGCCTCCATCATTGATGCCGAACAGGACTCCGTCCGCTTTTATCGCCTTGGCAACAACTACAAAAATCGAATCGACACCATGGGGAAAACCGGCCCTGTACAGACCGGTGAACCGCTGCTTTTGTAGAAGGATGTTCTGCGCCGACCATTCCCATACAAAATCTTTCGGCAGGTCGGCGCAGAGAAAAATTGCATTTTGGGCATGAAGCACTGGGAGTGATACACAGCCCGTATGGAAAACCGGGTTATTTTCCAGTCCAAAATGCGATTCCATGTTTTTTCTCTTAATTTGCACAAACGTAAACACCTGCTTTTGTGCAAATTTGCT # Right flank : TGTGCTTGCAGATTTGCGTGGTGGAAAAGGCATGACGTCGCCCCCCACATCACCGTTCTCCGACTCTAAAAGCCGTGGGTTCGAATCCCGCCGGGCGCACAAAAATCTCGAATGCTTTTGCATTCGGGATTTTTGAATGAAAGAGACCGAGCACAGAGCGCGGAACCGTTTTGGATTCGGCCGGCTCACAGAAAGCCATTATCCTTTCTTTTGCGGATCAACTGCCTGTTCCAGGAATTCGCACAGGGTTTCAGCGGCGCAAAGATTTACACCGCATTTCTGCGCCAACAGCATCTCCCGAAACCGGCCGTCCTGCTGCAGTTCGTACAGCGCCGGGAGCAGCTCTTTCTTTGGGGCTTTGGCCAACAGGCTCATGCCATGCGTCAAAAAGTACTCCGTGTTTCGCTGCTCACAGCCGGGAATGGGGGAAATGTGTATCAGCGGGATGCCGGCGGCCGCCGCTTCGGTGGAGGATAAGCCGCCCGGCTTGGTGATGAACA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTACGCGGGGGCGTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 1 18599-20777 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFJT01000016.1 Anaerofilum sp. An201 An201_contig_16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ================================================================================================================== ================== 18599 31 83.9 21 A.....G.T.A................A... AGACGCAGAAGGTCGATGTCC Deletion [18651] 18651 31 77.4 19 C....G.....TAT...C...G......... AGGCGCATCTTGGTATAAA Deletion [18701] 18701 31 74.2 18 A...T...TCA...A......T.....A... TATAATCATCACCACCTT Deletion [18750] 18750 31 54.8 114 TGTT.TGAG....AA..GA......CA.... AGTGCTGGTCTCTTCGCACTTATCTTGACTTGTGTCAATGCAATCCCAAAGTAAAATCGTGTTATCAAAGCATACATGTTGTGCTTTGAGTTGTCGGGTTGCGCAATATATGGA A [18770] 18896 31 100.0 35 ............................... TACACTCCATGCTCTGCTCGATACGCCCTTCATTT 18962 31 100.0 35 ............................... TTGAAATCTAACCAAGCGGCGATGTCGCGATACAT 19028 31 100.0 36 ............................... TCGTGTACGGACGGCCTACCCCAAGGGGCGCAAAGC 19095 31 87.1 34 ........TCA................A... CGCACAAACCTTCACACGGGTAAAGATGCCCCGG 19160 31 87.1 35 .......T.........CA........A... CAATGCTTTCTTCTTTCTGGCTGCTGCTGGAATAC 19226 30 90.3 68 .........-AT................... CATGGTTTAAACCGCACTCCTGTGGATTGTTGATTGTCGCAGGCAATTTGCATGCACTCTCCTGATGA 19324 31 74.2 35 A...T..TTCA...A............A... CAAGCTGAAACATTGTCATGAGCATTACAAGAGAG 19390 31 87.1 35 ........TCA................A... TCGTGGGATTGACGCATTCTTTCATCAGGGCAATC 19456 31 96.8 23 ............................G.. TCAGGGAGTGGGTGGATGTACAG Deletion [19510] 19510 31 74.2 35 ..T.TG.T..AT.....C...T......... TGCTCCGAGGGTCGCAGAGCCTACGATGACCTGCT 19576 31 90.3 34 ........TCA.................... CGGCAAAAAAACGTGACCGGCCGCAACGGCTGAT 19641 31 77.4 35 .GTA..TT......T....A........... CCGGGAAGAAGTTTCGGCCCCCTACAATCAGGGCA 19707 31 93.5 35 ....T......................A... CCTTTGCGTCGGCTGCGCAAGGTGGTTATCTACCC 19773 31 96.8 34 ..........T.................... TGCAAAAAGGATGAACCCATCAAGCAGTTGAAAC 19838 31 87.1 28 ........TCA..........A......... TCACCATAAAAAGGCCTCTGTGGCAAAA 19897 31 74.2 36 A........AA.AT.....T.G....T.... TCCCGGAAAGTAGGTTATAATAGCTACTCTGGTCTT A [19908] 19965 31 77.4 24 AG......TCATA.................. TAAATGGAAATACACTGGAAAACA AGTGCGC [19980] Deletion [20020] 20027 30 80.6 36 .....G...-A.AT............T.... TGTCCAATCATTTGCAGATGTAAACGCAGACTACAT 20093 30 67.7 36 .C...-.T...TA..A.C.T.T....T.... CAGCCACCACATACGACATATTACATTGATGGTGGC C [20108] 20160 31 74.2 33 A...T.T.TAA..........T.....A... CGACAACCACACGATGTCCTCCGCGAGCGCACG G [20177] 20225 31 93.5 36 .C...T......................... TATCTATTGACTCGCCCCCTCTCTGTGTGCGGGTAG 20292 31 90.3 34 ........TCA.................... TAATGTCTCAGTGTGGGCGCTAAGTAATACTTCT 20357 31 83.9 35 A...........A.....T..T.....A... CGAAGAAATGTTCTTTTCACTGCATCAGCTGCAGT 20423 31 77.4 37 .C..T...TCC.A.A................ TGTAGACCCTGCAATTACCCCGGCTTTCCCGGAGAAG 20491 31 87.1 33 .........CA.TT................. TCTGGCAAATGCGATTATTTTGGCAATCCAAAT 20555 31 83.9 35 ........TCA...T............A... CACCTCGGGGTTTTCTTTCGCTTTGCGTTCGATGG 20621 31 96.8 35 ............A.................. TCCGTAGCGATTGTAGTAGACTTTAATCTCACGGA 20687 31 96.8 28 ..........A.................... TATATCCCAGCATTTCAAGGATGTCCTT 20746 31 77.4 0 .....G.T.CAT.........T.....A... | A [20761] ========== ====== ====== ====== =============================== ================================================================================================================== ================== 33 31 84.6 36 GTCGCACCCTGCGCGGGTGCGCGAATCGAAA # Left flank : TCTCTGATACCGCATACTCTGCTGCGATTCGCGGACCCGTTCAGGTCACGTTCTGCGATAGCGTACACGATATCGAACCTGAGCGTCTGACCCTGACCCGCTGTGTTGCCACCAAGGACAACGAAGATGAGAAGAATCGCACGATGGGCGACCGTTGGATTGTGCCGTATGGTCTGTACAAGGGCGTTATCCGGGTTTCCGCTGAGGTCGCAAAGAAGACTGGGTTCTCTGCGGATGACATGAGTTTGCTGATTGAAGCCCTGGAGTGGATGTTTGAGGAAGACCAGAGTGCTGCCCGTGGTCTGATGACCATGCGAAAGCTGGTCGTGTTCGAGCATTCCACTGCTCGCGGAAAAGCGCACTTGTCCTCGCTGATGGACACTGTGGATGTAAAGCTCTGCAATGGGATGGATGCACCGAGCCGGTATGAGGATTACGAGGTCGGGGTGCGCGGTGAATTACTGCCCCCGAACGTAAAAATGCATGTTGTTGTTTGAGTT # Right flank : ATAGGGCCACCAGTGAAAAGTAAGGAATCAAGCCGCTGCGCCCTCTTTTCTTTCCCCGAAAAGTGCATACAATATTGTTCGAAAGCTGATGCGTGACAAAAACGGCAGGTTTATGCCGCGTATTGCATTTCGAACAATAAAACCGGTAGCATGCCGGGCACAGAAGGGAAGAAAACCAAATGAAGAATTTCAAACGCGCCATGTCGTGCGCAATGGCTGTGGCTATGGCTCTGAGCTGCGCCGCCGTCCCCGCCTTCGCGGCCGAGGACATGACTGAGCCCAATCCGGTTATCGAGGCTCATCCTGATGATGGTATGAGCCCCACCAAGGTCGTTACCCCCATCGGTCAGAAGACCTTCTACAAAATCAGCGGCGACCGCGTGATTTACACCGACCGTGATGATGGCACCGGCTGGGAGGCCGTTCCGTCTCAGTACATCAAGGGCAGTGAGTACAACGTGGGCAACGTTGATTACGGCATTTATGCGACTTCCGATGGC # Questionable array : NO Score: 4.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.23, 5:0, 6:0.25, 7:-0.38, 8:1, 9:0.13, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTGCGCGGGTGCGCGAATCGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.00,-7.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [54-62] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //