Array 1 16885-17272 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIRF01000054.1 Acinetobacter bereziniae strain L65 NODE_54_length_27619_cov_36.3739_ID_107, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 16885 28 100.0 32 ............................ ATTTACAGAGGAAGAAATTGCTTCTGGAGCGA 16945 28 96.4 32 T........................... GAAATATTCACAACCGATGTACTGAAACTTTG 17005 28 100.0 32 ............................ TATAAAAGAAGAAGGTCAATTAATTTACGAAT 17065 28 100.0 32 ............................ TTAGCAAAAAAACGGATGGTATTAGGTCAATG 17125 28 100.0 32 ............................ CTAGTAAAATCACTTCTTCAAGTTGCTCAGTT 17185 28 100.0 32 ............................ CAAAGGTGCATGTATGCATCTAATTGCCATTC 17245 28 82.1 0 ......................ATCCT. | ========== ====== ====== ====== ============================ ================================ ================== 7 28 96.9 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : GCGCTGGGCGAAAACATTATATAAACAACTTGCTAAAGGATTTGGAATTGAATTTATCCGCGATGAAGGAAAAAATTCTCACGATACTATTACAGATATAGCCAACAATTACCTAGATCATGGAAATTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGGATTAGCTTTGCTCTACCTATATTACATGGCAAAACACGCCGAGGAGGCTTAGTTTTTGATCTCGCGGATCTAGTCAAAGATGCTATCGTGATGCCTATAGCCTTTATATGCGCAAGCAAGGGTTTAAATCAAAAAGAATTTCGAATGCAACTCATCGAGACTTGCCAAGATCAAGATATTTTAGATTATATGTTTAGCTTCATTACTGAAATATGTAGTAAAATTAAATAAAATCAATACCTTAAAAACAACTCTTCTCTACGAAGTATTTTTACTCATTAAAAACTTATATAATTGATTTTAAGTGTTTTGTTTTAACTTAACTCTA # Right flank : ATCTAGAAACAGTCAAAACATTGTAATGAAAATTAACTCATCACATCATCCAATACTTTTACCATTAAAATTCTCTTGTATTTATTTTTAAGAGTCAATTTAGACTCCACTCAACTATCAAAAAAATCCCCGCACAATGGCGGGGATTTTTTTATGATATGAGATCAGAATGATTTACATCACGATGATCATATCGACCATGCCCACCACGATGATCATCATCGTATGGCGCAACAATACAGCCTGTGAGTGAAACACCTAAAACACCGAGTAAAATAATTTTCTTCATCATGACAGTAGCGTCCTATTCATCTTATTTTTTTAAGCTTAACTGTGTAATGTGAAGTTCAACGCAAGCTTGTGTTTCAACGTGTAGTTATTTCAACATGATTTATTCACACTACTTATTTTTAGATAAAAAGCTATTTTAAATTAATAGGTTAATGTATGAATCCAAAATAGTCGTATGAGTTGTCCTCGATCATAGGGAAAACTGGAGA # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 68864-69434 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIRF01000007.1 Acinetobacter bereziniae strain L65 NODE_7_length_143946_cov_33.1104_ID_13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 68864 28 100.0 32 ............................ ATTCTAATCATTGCTGCAACGGTTGAACCAGT 68924 28 100.0 32 ............................ CAGGATCTCGTGCTTCAGCTCAACGACCGATG 68984 28 100.0 32 ............................ CATGACCGAACATGTCCCACCATTTGCGTGTT 69044 28 100.0 33 ............................ AACGTCCGCCTTTGTCTTTGTGCATGACTATGA 69105 28 100.0 32 ............................ TACTGGATTTTCGATACTAATGGTTTTTGTTT 69165 28 100.0 32 ............................ AAAGTGGACCAAAGCTGGTGGACGTGTCTTGG 69225 28 96.4 32 .........T.................. TGAAGCATGTGTGGCAGGTAACTTACCAGCAA 69285 28 96.4 32 ...........C................ GCAAGACACAGTTAGAAGACCGTGGCAGTTGG 69345 28 92.9 32 ...G.......C................ TGGTAATGCAACAGCACAAGATGATTGGAGAA 69405 28 89.3 0 .........T.........A.......C | AC [69429] ========== ====== ====== ====== ============================ ================================= ================== 10 28 97.5 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : GTCTGGATATACCTACCAAGATTTTTAAAGGGTTTACAAGTATTTTCAAAGACTTGTAAGCCTTTTTTTATGGTTAGAATTTTGTTGTTTTGACTAGATTTATCAAAAATCATAGAAATAATTACTAGACTTCACCAAGAATGCACCAAGATGAGGATGAATGAAGTTACCAAAACCGATTAAACGTGGTGAAGTTTGTTTTACTAAGAAAATAATGAAATGTAAGATTTCTTCATTTTCTAATGATAAATTAAATGAGTGGCATTAAAAACATGTGTGAATATTGGAAAATCTTTTAGTGATAGGATAAAAGTAGCTGATTTAGAGTATATAGGCTTAATTAATCAAACAAATATTCTAAAATTTTACCCCAATATTTTTTAACTCTTTAACAACTGAATAAAATCAATAAGTTATAATTGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAATTATA # Right flank : CTTAAAATTAATTGGATATAGGTTTAGTGTGACTGGAAAAGTCTAATCAATTGAAAAATTTCAATATTATATTTAAAACAAAATTTGACAAAATGAGCGACATAATCTTTGACATTATTACAATTAAAATTTGACTAAATTTATGATTTATAATAATAATGTTTTGACATTTTATTTGACAAAAAAATTGAAAAAATGCCTGATCAAAGTAAAGTTTGGCTAGATGACACAACTTTAAGAGTCATGACGTACAAGTCCGGCTCTTTTACCTTTCAGCTTGGGTTTGACTTAGAGCAGGTTACGCCTATGCTTGATCGTGTAAACGATGCACAGAATAGATTTAATAAAATGCCAAGTTTGCCTCAAATTATAGATCAAGTACAAGAAAAGGTTTTAGCAAGTAGTATTTATAGTACAAATACCATTGAAGGTGGTCAATTTACAGAGCAAGAGACGAAGGAAATTTTAAGATTAGATCCTAAGACAATACAAAAGACCGA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 73524-72723 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIRF01000020.1 Acinetobacter bereziniae strain L65 NODE_20_length_73565_cov_33.0691_ID_39, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 73523 28 100.0 32 ............................ AAACGGAATATTCATGGTCCTCAGTGAAAATT 73463 28 100.0 32 ............................ TGAACCAAAAATACAAGTCCGTGATTATCCTA 73403 28 96.4 32 ...........T................ CCCCGATATTGACAGCGGACAGACATTCAAAA 73343 28 96.4 32 ...........T................ AAAGTGAGGGCATATTTTCTTACATTGCTGAT 73283 28 96.4 32 ...........T................ ACGGATCACGAAGCCATCTTTCAAATTCATAG 73223 28 92.9 32 ..........AT................ ATCGGAGAAAAAGTACAAGAGGCACATAGTAA 73163 28 96.4 32 ...........T................ GAAATTTCGGAATTTTCACCTTAATTATTGTT 73103 28 100.0 32 ............................ AACCATTATTAACAACAGTTTTAGTTGTGATT 73043 28 100.0 32 ............................ GTGGTGAGTAAGTTTAAACATGCCGAAAGTGT 72983 28 96.4 33 ..................T......... AATAAATTTGGATACTGGGGGAGTGATTTGGTC 72922 28 100.0 32 ............................ TGCAGAAGTTGAGAGCAAAGCCAAAGGCAAAT 72862 28 100.0 32 ............................ GCTAGCAAACGCATGGCAATATGCCGCTGAAT 72802 28 100.0 24 ............................ TCATTGATGTTAAAGAGGATTACA Deletion [72751] 72750 28 89.3 0 ..C......T...........C...... | ========== ====== ====== ====== ============================ ================================= ================== 14 28 97.4 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : AGCTTAGAAATAAGCCAATATCACAAATGACAGTAGGGGAA # Right flank : AATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTTGTATAAATTGTTTATTTTATAGCAATAAAAAAAGCCCACTTGAATGAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAATAAGATCAAAATTAAAAAAATGGATTTGAGTGATTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTCTATCCTGCA # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //