Array 1 333980-334128 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE386925.1 Azonexus hydrophilus DSM 23864 G471DRAFT_scaffold00001.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================== ================== 333980 27 100.0 34 ........................... CACGGCCTGGTAAAGGTCGGCTTTGGTGAGGGCC 334041 27 96.3 34 ........................C.. TTGCGCCATTTCGTGATGCACGCGGCGCAGGGCC 334102 27 88.9 0 ........................NNN | ========== ====== ====== ====== =========================== ================================== ================== 3 27 95.1 34 TATCCCCGCGAACGCGGGGGAACCGAG # Left flank : CGGTGAAATGGAAGCCGTTGATGCCGACGAAGTTTTAGCAAGCCTGAGAGCCAAACTCGCGGCATGGCGCAAAGCCAATGAGGACATGCCGCCGAGTTAGCCAAAATCAGCCAATTCGCGATCAAGCTCCTCTTCCGATGGGCGAATCACCGCCACACCGAGTACTCCCAAAATGTCGATCATTTCGCTGATCGACACCCCCACCAATCTAGCTGCCCGCCCAAGAGAAATACGCTCATCAACAAACAGTTTGATCGCCAGCCCCGTCCCCAAGCCATCGCTGATCAGCATCTCATCACAAGGCACAGCAACAAACAGCGGCACACCCCGCTTGGTAACCAAGGAAAATCTCCCGCTCTCGGCTCGGCGAATCAACTTGCCAACATGCTTGCGTAGATTGCGGATTTTAAATGTGTGCATACAGGGATTCCTGTGCCAAGCTCCAGCGGGAAACGGTAGCGCAGTTTTCTTGGGGAGATCAATATTCTGCAAGACAAACG # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCCAGGGCCTATCCCCGCGAACGCGGGGGAACCGTGTTA # Questionable array : NO Score: 5.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TATCCCCGCGAACGCGGGGGAACCGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.40,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 334654-335414 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE386925.1 Azonexus hydrophilus DSM 23864 G471DRAFT_scaffold00001.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 334654 29 100.0 32 ............................. AACCCTGGTGACGTCCGGCGGCTGGGCGAACG 334715 29 100.0 32 ............................. ACAAAACCGTATTGCACCGCGTATTTATGCCG 334776 29 100.0 32 ............................. GGAATATACGGCGAAAACGCCGTCTATCATGA 334837 29 100.0 32 ............................. CTGATGCCGGATTGAATCGGGGCGTGCTTGAT 334898 29 100.0 32 ............................. GACTAACCTCGCTGCGAGGTACTGCTGCTCCG 334959 29 100.0 32 ............................. GATATTGTCCAGGTCATCGACGGCTACGTGCC 335020 29 100.0 32 ............................. GTCGCCGACACAAAGCGGCCATCCTCGCCCAC 335081 29 100.0 32 ............................. CGAATGGCCGTCAGATCGCCGTAATACAGCAG 335142 29 100.0 32 ............................. GAGCTCAAGGCGTTGACCGATCTATCACGCGA 335203 29 100.0 32 ............................. CAGGCCATACGGCTCACGATTGACACCTGTTT 335264 29 100.0 32 ............................. GAAGGCTTTGGCTTCTTCCTGTTCCTCGTAGA 335325 29 100.0 32 ............................. GCAAATGCCCAGGCCTTCGCCGATTCTTTCGA 335386 29 96.6 0 C............................ | ========== ====== ====== ====== ============================= ================================ ================== 13 29 99.7 32 GGGCCTATCCCCGCGAACGCGGGGGAACC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCCAGGGCCTATCCCCGCGAACGCGGGGGAACCGTGTTATGCGGCGCGGACGCCGTCCATCCTGC # Right flank : CCCTCGATTTCCTTCTCGATGGTGACGCGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGCCTATCCCCGCGAACGCGGGGGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-21.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //