Array 1 22936-25746 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXXO01000005.1 Streptococcus sp. CCUG 71758 NODE_5_length_78858_cov_433.835747, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 22936 36 100.0 30 .................................... TTGGCATATAACCTCCTTCTACTCAATCCG 23002 36 100.0 30 .................................... TAGAAAGCGTCAGTAAAGGTTATGTGACCT 23068 36 100.0 30 .................................... TTAGGCTCATTACCATCTGTTACTCCTTTT 23134 36 100.0 30 .................................... CCTAAAAGTTGAAAATATTATTAGTTTCGG 23200 36 100.0 30 .................................... CCGAGAAGTTCCGGAACTTCATTGATAACT 23266 36 100.0 31 .................................... TTCATTATTTAAGGTTTCTTCAAGTGCAATC 23333 36 100.0 30 .................................... CGCTAACTTGTTCCTTAAGCTGTATCATAC 23399 36 100.0 30 .................................... CAACCGTTACAGAGGAAGGAGAGTAAACAT 23465 36 100.0 30 .................................... GGCGGAATTGTACTTCCTTCGCGCTGTGCT 23531 36 100.0 30 .................................... AGCTGAAACGTTTGAAAGAGCAAGAAGCCT 23597 36 100.0 30 .................................... GGTGAATTGGGGCAGTGATTGGAATGCTCC 23663 36 100.0 30 .................................... TGAGAAGCTAATCAGCAAGAGTAAATTGAA 23729 36 100.0 30 .................................... TGTCAGAGGTCTTCCGGGGCTTGGATGGGT 23795 36 100.0 30 .................................... CTACGTTGATTTGGTCTTCATGCACGTACC 23861 36 100.0 30 .................................... ATCCACAGAAGCGTTCAAGCGTTTTGCGAA 23927 36 100.0 30 .................................... TACAGAATTAACCACAATCACTCACACGGT 23993 36 100.0 30 .................................... AATGAAAGCAAGAAAGACCCGTCAAATTTT 24059 36 100.0 30 .................................... ACATCATCACTGGCATTCTCACAAGTGATA 24125 36 100.0 30 .................................... TACACAACGTGGTATGTCTGCATCGAATAT 24191 36 100.0 30 .................................... ACGTGTCCACAGATTATTTACTTGGTCGCA 24257 36 100.0 30 .................................... TGTACTTATTTCATCAATGATATGGGGGTA 24323 36 97.2 30 .................C.................. CCATTATCCCAATGTGTCAGCTCGTTGACA 24389 36 100.0 30 .................................... GGCGGAGATTATGACTGGTCTAGTGTAGGT 24455 36 100.0 30 .................................... AAGAACGCGCAAACGGGATGATCCCAGCAG 24521 36 100.0 30 .................................... TAAAAAACATAATGATACGTGGGTAATTGC 24587 36 100.0 30 .................................... CCAAGTACACAATTTTCAGTGGTTCCTTGT 24653 36 100.0 30 .................................... CGCATTAGGGAAAAGAGTAGAGCCGAGGTA 24719 36 100.0 30 .................................... AAAGTTAATGAAGAAGGTGACTGGGGAACT 24785 36 100.0 30 .................................... TTTCGACCTTATAAGTATGTCCATGCAAGT 24851 36 100.0 30 .................................... AATAAGCATTTCCAAGCCCTTTTCTTCAAT 24917 36 100.0 30 .................................... AGCAAGCGCCTTGGAGACTTGTCTAAATTG 24983 36 100.0 30 .................................... TAGTTTGTTATCTCAAATCTCTTTCAACAT 25049 36 100.0 30 .................................... AAGTTACTAGCATTAGATAAAAGGTACGCA 25115 36 100.0 30 .................................... AGAAGTTGCACACTCGTTTGCTTGAGGCCT 25181 36 100.0 30 .................................... TCTCGGAAGGCAAGAAGTTGCTGAAATGCT 25247 36 100.0 30 .................................... CCAGCCTTTACCAACAATGGCTAAATCAGT 25313 36 100.0 30 .................................... TCTTCATCAGTCTTCTTGATGTCAAAACGT 25379 36 100.0 31 .................................... CCAAGTATGATATAGTTTTGTTAAAAATGAA 25446 36 100.0 30 .................................... AATAAATGCATAATCAATTGCTTCAGGTAT 25512 36 100.0 30 .................................... TCACGAGTAGGAATATATTCCCATGAGAAT 25578 36 100.0 31 .................................... AAAGCACGTAAGAACCTTGATTGGCTGATTG 25645 36 100.0 30 .................................... CAGATTCTTGCGAAATTCCCAAACAGCTTT 25711 36 91.7 0 .................................TCT | ========== ====== ====== ====== ==================================== =============================== ================== 43 36 99.7 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAGCTCAATGACAAGCCCGAAGTCAAATCTATGATTGAAAAGCTGGTAGCTACGATAACAGAATTGCTGGCATTTGAGTGTTTAGAAAACGAATTAGACCTAGAGTACGACGAAATCACCATTCTAGAGTTGATTGATGCGCTAGGGGTCAAAGTTGAAACTCTGAGTGATACACCTTTCGAAAAGATGCTAGAAATTGTTCAAGTTTTTAAATATCTTTCCAAAAAGAAACTCCTTGTCTTCATCAATGCGATCGCCTATCTATCAAAGGATGAGTTGGTAAATCTGATAGAGTATATCCAACTCAATCAACTAAAGGTTTTATTTGTCGAACCTCGAAAAGTCTATGATTTTCCGCAGTATGTGCTGGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGAGTAACAATTGGAACCTGACGAGCTGAAGTCCGGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG # Right flank : TACACAAAAAGCTACTCATTCTTTGAGTAGCTTTTTAACTATCCCCCTACACATAGCTCATTCCCTTATAGCAAAGGAAAACGGCTAGTGCGATAAAAAGTACAGTTGCTCCGATTCGCTGGCTGGTACTATACATCCTTCTCTCCCATTTGACTGGAAAGATGACTGCTAGAAAAGCACCGCCTACTGCACCTCCGATATGCCCAGCTAGGCTGATTCCTGGAATCAGAACACTTCCGATAATATTAATCACAAAAAGTGTCAGATAGGATTGCCCCAACTGCTGGATATAGGGGCTGCGAGTTGCGTAACGCAAAACGATAATCGCAGCAAATAGTCCGTAAAGAGAAGTGGATGCTCCTGCTGCTACAACTTTCGGTGTGAAAGCAAAAACAAAGAGATTGCCCATCATTCCCGATAAGAGATAGAGAAAGAAGAACTGCTTAGAGCCGAAAATCTCCTCCACCTGTCGTCCAAGAAAGTAGAGTGAAATCATATTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //