Array 1 408839-408388 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGMV01000002.1 Enterococcus faecalis strain 8C4_DIV03288 scaffold00002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================================================================================== ================== 408838 37 100.0 29 ..................................... AGATGATCAAACACAGAACATTATTACAC 408772 37 100.0 29 ..................................... GGTACAGAAACTGTATGGTTCAGCGTATG 408706 37 97.3 29 ....................................G TCAATGGATTTAAACAGGACTTTGCAGAA 408640 37 94.6 29 ............A.......................T GGGGATCACTGGGCAACATTCTTTTGTAA 408574 35 81.1 114 ......................TT.--.CG......G ATATGATTGATGTAAAAATATCGTTAATATGTATAAATATGATTGTTATATAAAAAATATAAGTGATAAATTGAAGCTTTGCTAGAGCAAGTGATGCGATTACGAAATTATTTA T [408542] 408424 37 70.3 0 A...........C...A....TT.CTT...G..T.G. | ========== ====== ====== ====== ===================================== ================================================================================================================== ================== 6 37 90.5 46 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACGTCAATGGATTTAAACAGGACTTTGCAGAA # Right flank : GAATACGATTAGTTAAATATTTAGTTTTACAGCTATGTTGTTATTATATGTGTTGAACGAAGTTATTGATTTTAAAAGTAGTTGTTCTTCTTTTTTTATATGCTACAATTTTTCTATATTAATTATTAGTTAAATATTTAAGGAGGTGATTGTAATAAGAAGGAAAGAATTTAACAAAATAAAAAAAGAAATGGAATATGTTAAAGTAGTTACGGATTTACTAATGGTATCAAAATTTTTTACGCTACAGTCCGATGAAGATTTACATACATTAACTCTGTTTGGAACATTACTTATTTATATTTATAGATGCTCTGTAATGAATGCGTTTTCTACGAAGCTGGATAATAAAAATTGGCATTTTTCAAATGCTACTTTATGTAGTTTACTTTTTTATAGTGGCTATGTATGTTCGCATTTATTTCTTTTGAATAAAAATCACTTATCTATAAATCAAGAACTAATCCCCAATTTATTGAAAATGACACTCCCTGTTTTAT # Questionable array : NO Score: 3.83 # Score Detail : 1:0, 2:3, 3:0, 4:0.53, 5:0, 6:0.25, 7:-1.64, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 2 413498-413065 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGMV01000002.1 Enterococcus faecalis strain 8C4_DIV03288 scaffold00002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 413497 37 97.3 29 ....................................G AGTTTCTTTTGAAGCTCCTCCACCTGCTG 413431 37 97.3 29 ....................................T CCCTGGGTGTTAGGTGCAACTGCAGCGAT 413365 37 97.3 29 ....................................C AAAACTATCATCGCCGACTCATCACCTAA 413299 37 100.0 29 ..................................... CCAATATCGGGAAATCTAACTGGGAAGAA 413233 37 100.0 29 ..................................... AGATGATCAAACACAGAACATTATTACAC 413167 37 100.0 29 ..................................... GGTACAGAAACTGTATGGTTCAGCGTATG 413101 37 97.3 0 ....................................G | ========== ====== ====== ====== ===================================== ============================= ================== 7 37 98.5 29 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Left flank : CACAATTAAATGATAAACCAGAAGTCAAATCAATGATTGAGAAGTTAACTGGAACAATTAGTCAATTAATTGGCTATGAATTGTTGGAACATGAAATGGATTTGGAAGAAGATGGCATCACCGTGCAGGAACTTTTCAAAGCTCTTGGAATCAAAATCGAAACAACGAGTGATACGATTTTTGAAAAAGTTATGGAAATTACACAAGTACATCGTTATTTATCAAAGAAAAAATTATTGATTTTTATTAATGCGTGTACGTATTTGACAGAGGATGAAGTGCAACAAGTGGTAGAATATATCTCTTTAAATAATGTGGATGTCCTGTTTTTAGAACAAAGGGTGGTCCAGAACAGATTCCAATATATTTTGGACGAAAACTTTTATTTGAGTTATGAAAAAGCTTAAATTGTTATTGATTAGTGGTTCATTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAGTACGGAACTTTGGAGAAAAAATAATTCTCCGAG # Right flank : TCAATGGATTTAAACAGGACTTTGCAGAAGTTTTAGAGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 1 757118-757682 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGMV01000001.1 Enterococcus faecalis strain 8C4_DIV03288 scaffold00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 757118 37 100.0 29 ..................................... TCTAAAGCTTTTTCTAGGGCGTTGTGTGA 757184 37 100.0 29 ..................................... TTTCATTAAGGTTGGCTTGTGTGCTTTAT 757250 37 97.3 29 ....................................G TTGCATGACTTGTGTTTGATTTACCTACT 757316 37 100.0 29 ..................................... TTTACCACAAAGAAAAGGACGTGAAAATA 757382 37 94.6 29 .......................G............A AGAAGCAAAAGAGAACATGATTGCCGTTT 757448 37 94.6 29 ..........T.........................A TTTATATCCAATCACAGTAGCAATACCTT 757514 37 97.3 29 ....................G................ GATCGTGGATTTTCTGACAGGTTGGATCA 757580 37 97.3 29 ....................................C CAAGTTGGTACGATTACTCAAAAATTAGA 757646 37 67.6 0 ......T..C.........A.A..ACAA..T.TC..C | ========== ====== ====== ====== ===================================== ============================= ================== 9 37 94.3 29 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Left flank : TGTATATCCTCATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAAGGTGGAGAAATGACACACATGATTGGCTTTGCCACTTTGCAAGAAAATATCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCTTTTCCCACAAACTTTACAAGAAACCTGGGCAAGGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTCGTTGCAGCACCAGAAATTTCGTTTACGCAATATAAAGGACCAGCAGAAGCTAAGTACAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAACCCACCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAGAAAGTTTGGTATAATAAACGTGAAGAAAAAAATCAAACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATAATTCTCCGAG # Right flank : CTCAAGCAATCCGTAATTTTCATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGCTTCAATTTTTGGAAACTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGGTAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAGGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAGGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAATCCAATTTGCGATGACAACAGTTTTCCACTTTTTCTTCGTACCGTTTTCAATAGGATTAGCACTTG # Questionable array : NO Score: 5.83 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //