Array 1 677402-675120 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTYD01000001.1 Ruminococcus sp. AM34-10LB AM34-10LB.Scaf1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 677401 36 100.0 30 .................................... TTGCATTTTTGAGAACTGCGAAGAGTTCGT 677335 36 100.0 31 .................................... TAAATCTATTAAATTACCATTTGGATATATA 677268 36 100.0 31 .................................... CTGATTATATCAGGTATGGCGGTGCTGACCA 677201 36 100.0 30 .................................... AAACCTCCATTAACTGAGCAGTTAATTCTT 677135 36 100.0 30 .................................... TCTTTTTGCCGAGTTTAAGCTCCCAACGGT 677069 36 100.0 31 .................................... TTTGTGAATTTATTTCTTGCATAATCGTTGA 677002 36 100.0 30 .................................... TAAGATTTTCATATATCGCAGAGTGACGCA 676936 36 100.0 31 .................................... TTTACATATGCGCAATCAACGCAATAACTTG 676869 36 100.0 30 .................................... GCAAGGAAGGAAAGCTCGACTATTCAGACC 676803 36 100.0 30 .................................... TGAATGCGAGTGTAGCCGTGTTATGTGAGC 676737 36 100.0 30 .................................... TTGAACAGCCTTGAAGATTTGATTGACAGA 676671 36 100.0 31 .................................... ATTCTTCCTCTACGGGAGTACGGTTTTATAA 676604 36 100.0 30 .................................... TTCGATTTCAAAAGCTGATATTTTCACTGA 676538 36 100.0 30 .................................... TGTAACCATGAAAAAGCGCATACAGGTTTA 676472 36 100.0 30 .................................... ATGTTGCATATGCAACAAAAAAATTAGGAG 676406 36 100.0 30 .................................... GATTTTCGGGAGTGGGCGAAACATTGCAAG 676340 36 100.0 30 .................................... CAAATAATTAACGGCTTCTGAGAGGTTGAG 676274 36 100.0 30 .................................... ATCAAGATTTGAGATATCATCATTTCTATT 676208 36 100.0 30 .................................... CAAGGAACTCCAATCAGTCCAATGCTTACT 676142 36 100.0 30 .................................... TATCCCATACTGCAAGTATAGCACACCCGT 676076 36 100.0 30 .................................... GGCGGTCTTGCCATAGAGTGTGGCGATGCA 676010 36 100.0 30 .................................... TATTTCAAGCCATACTTCCATAGCCTCTTC 675944 36 100.0 30 .................................... CGGCAGTAACTATTTTGCTGTAAATGCTGC 675878 36 100.0 30 .................................... TCCAAAACACCGAGCCGTGCAGCCATTGCG 675812 36 100.0 29 .................................... TTCGTTCGTATCGTAATAATACTCGTTAA 675747 36 100.0 29 .................................... CAATCCTTGCAAAGACACTCAAGATTGTT 675682 36 100.0 30 .................................... AGTGTACATTTTTGAAGTGATTATCACCCG 675616 36 100.0 30 .................................... TTCGGCAAGTATGTGTTTATATAAATTTCC 675550 36 100.0 30 .................................... CCATACTTTCAGATAGTGCGTGTCACCGCT 675484 36 100.0 29 .................................... GAAAAATGCGATAGACAAAAGCGGCTGAG 675419 36 100.0 30 .................................... AACCGGATCAAGAATTTCATCACACAAGCC 675353 36 100.0 30 .................................... TCGCAGGCTTGCTAAAAGCTTCGTCGCAGG 675287 36 100.0 30 .................................... CGGAGCTTGCAACCCACTCCGAGGACGGCG 675221 36 100.0 30 .................................... GGAGAGAGTAACAAAACCACTTATCACGCA 675155 34 88.9 0 .......................T...--......T | C,A [675123,675134] ========== ====== ====== ====== ==================================== =============================== ================== 35 36 99.7 30 GTTTGAGAATAGTGTAAATCTATAAGGTAGTAAAAC # Left flank : TTTTTTTGAAAATTTGTGTAATACAAAATATTTTCCGCAAATTTCAGAAATTAAAGCTTTATGTGTGAGCTTGTGCTGCGAGCTTTCTAAGGAAAATGATTATGATTTTCAGTTCTGCGAAAGTATCGAAACAATGGCATTAGTAAAATTGTTTTCATTTGTGCCTGCAGATGCCTCGGATGATAATGTCGGTCATCTTTTAAGATATTTCAAACTTATGAAAGAGTATCTTGGAATAAAGTGTTTTATTGTTCAAAATCTGCATATTTATCTTGATGACAGTGAATGTGAAAATCTTTTGGAATCCGCCGTTATGCACGGTATATATTTGCTTAACATTGAAAACTCAGTGCCGAAAGAAGTTTCTGAATACGAAAAACTTGTTGTGATTGATAATGATTTGTGCGAATTTTATTGACAATCATTATACAAATGTTATAAAATATCCTCATAGATTTGCCGTGCACAGTATAGTGGGTGCATTTTATTTTCAATTTGAG # Right flank : TTTACTCGTGGACTGTGAAAAAACAGCATTGCAAAAAACAATATGGCACATAACCGTTATCACTTTCGGTTATGTGCCTTTTGTAGTTTAATAAGTTTGTTAAGAATACCACGATTGATTACAGTCCAAAACAAGGAAGATTTCAGTGCGTTAATTTCCAAAGTAAGTTTCACCGTGGAAATTACTTTGGGGATTAACTATTTACTTTTTCGTTTAAATTTGCGGTAAATATGAATTGTATAATCCGTTTTATTGTGTTATTATGTAGTAAAATAGTGTGCAACATTGGTGTTTTGAAAAAAATTATGTTGCTGAAATTAAACTTGAAATAACTGACGGGTGGCATATGGTTCGCAAAGTTGACAAAACAAAGCTTCTGACTGTTGTTGGGATAGTTATATTCCTGTTTGGAGGTGCGGTGAGAATTTTTTCTCATCTTACTTCCTCGGCGGATAATTATATTGAAAATTTTGATGTTATTATCTTTTCCGGGCTTATTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAATAGTGTAAATCTATAAGGTAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //