Array 1 27474-17781 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBSG01000011.1 Acinetobacter junii strain NBRC 109759, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 27473 30 93.3 30 ............................AG TCAAACCAATCAGATACTTTTTGCCAAAAT 27413 30 93.3 30 ............................AA GTGGGAAACCATCTGCGTTGTATGTAGCAA 27353 30 96.7 30 .............................G TAGATTGAAGAATTGTATTGTCGTAATTGG 27293 30 96.7 30 ............................A. TAAAAGAACCGCTTACATAGCCTGAGCCGC 27233 30 96.7 30 ............................A. AATGAATCGCTAAGAGACTCTAAGCCAATT 27173 30 100.0 30 .............................. GCGACCCCTGCGCACAGCTTCGGGGACTCG 27113 30 96.7 30 .............................G ATCCAGATACACCTGACGACCCTAATAACT 27053 30 93.3 30 ............................AC AACCAAAAACAACATAAGTCTATATATATC 26993 30 100.0 30 .............................. GAGGTGTTGTTCTCCAGTCGCAGTCTGGAG 26933 30 100.0 30 .............................. GCCAAGAATCCAAACGGCAAAGTTATTCCA 26873 30 96.7 30 .............................A AAAGCGACTAAAAAAAGATCAAAATCTTAT 26813 30 96.7 30 ............................G. TTTCTAATGCCGTCCTACGTCTTGAGGCAC 26753 30 100.0 30 .............................. GATCTCAACGTATGGCGTGGCGTTCATTGT 26693 30 96.7 30 .............................G CTTTCGGCTTTGGAATCTTGACGGGTAAGG 26633 30 93.3 30 ............................AC GTATATTTTCCGCTTGCCACACCAGAACAT 26573 30 96.7 30 .............................G ACTCCAAAAAGTTTTTTGCAATTTGCTCTG 26513 30 96.7 30 ............................G. TGAACTCTACAACATCAAACGCTTTTTAAT 26453 30 93.3 30 ............................AC GCACAGAAGGGATCAGAATGTCCCATGAGG 26393 30 93.3 30 ............................CG AGTAAAAAGAGTTAAAGGAGATAGTAGTGC 26333 30 100.0 30 .............................. CGTTAAACTGACTAGGTTTTGCTTTTTCGA 26273 30 96.7 30 .............................G ATACCATATCAATTCTCCAGGCAGTATTTG 26213 30 93.3 30 ............................AC TCTTGAATCAGGTATCAAAATAGAAATTTC 26153 30 93.3 30 ............................AA TGGGTCGCAACCAATACAAACGTTGTGAAT 26093 30 96.7 30 ............................A. CGGCTTTTGAGTAGACTTTCATAAAAAAAC 26033 30 93.3 30 ............................AG TGAGATAGAGATGTTATCCAGACTGATGTA 25973 30 100.0 30 .............................. TAACTTTGCTAGTTCCGCTTGGGGTTATAA 25913 30 93.3 30 ............................AA GAATAGCCATTCTTCCCGCAGTTTCGCTCT 25853 30 96.7 30 .............................A AGCAGCAAAGGTTTGTCGAAGAATATCTGA 25793 30 100.0 30 .............................. GTACAAGGCAAATGCTAAATTCATGCTATA 25733 30 96.7 31 .............................A ACTGCCAGGATGAACCCCCTACTCACTGGAT 25672 30 96.7 30 ............................A. TTTGAATTGATCATCGCTCAACCCAAACAG 25612 30 96.7 30 ............................A. TGAAGTTATTCAGCCAAATAACAAGCTCTA 25552 30 93.3 30 ............................GC CCAAAATACCTTTGAACGAAGTTTCTCTTG 25492 30 93.3 30 ............................AA TTAAAGCAAGGTTAGAGCTTGAATTGATGT 25432 30 93.3 30 ............................GC TCCTTGAAGAATCTATTTTTAGGATTGAAA 25372 30 100.0 30 .............................. CAAATTGAGGGGCAACGTAAGAGTTGAATT 25312 30 96.7 30 .............................G GGTAATTTCACCTGGTGTGATACCTGGGTA 25252 30 93.3 30 ............................CA AGCAATATCATCATCATGGACTTCTTTTAA 25192 30 93.3 30 ............................AA ATTGAACTTTGACGATATCGAGAGCTTTAT 25132 30 100.0 30 .............................. CTGTAAAGCTTCATACTCAAGTGGACTTAA 25072 30 96.7 30 .............................G AACCAGGTCTTCCACCGATCACGCAAAAAT 25012 30 93.3 30 ............................AG CAAGCTACTCCAACTCAATCAACAAAAGAG 24952 30 96.7 30 ............................A. AAGGATGATTCGGAGTTGCTGGAGTGGGCA 24892 30 93.3 30 ............................AA CTTAACACACCATTGACCACGCTAGATATT 24832 30 100.0 30 .............................. GTAACGCCTGCCTGTTAAAACGCTTTCTTC 24772 30 93.3 30 ............................AC AGGGGAAATGACGAAATTGATAATCTTATG 24712 30 100.0 30 .............................. TCAGTCCATAGTTAGGGTGGTTTTTACCAC 24652 30 93.3 30 ............................AA TGGTGGTGCATGGCAGATGATTAAAGTAAG 24592 30 93.3 30 ............................AA GGGGGTATCTGATTTAATTGTGATTGGAAA 24532 30 100.0 30 .............................. TCCCGACAAAAGCCTGATCAATGTCAACTT 24472 30 100.0 30 .............................. TCGCGTATCTAGCCTTAGCCTTATCAGATA 24412 30 93.3 30 ............................GC CGTGAAAGGGCGACGCTCCAGAGTTCGATT 24352 30 96.7 30 .............................A TCACGTCGCTAGCGTGCGAGGACGAGGAGC 24292 30 100.0 30 .............................. ATTACTCTCACACAGCTAATGGCATGTGCT 24232 30 93.3 30 ............................AA TTGCAGTTCCAGTTGATAAATCCATTGGGA 24172 30 96.7 30 ............................A. CTGGGAGATCACGCCAATCGAAAGGCTTGT 24112 30 96.7 30 .............................A AAATATGGTGTGCCAGTCGGTAGGCTTTCC 24052 30 96.7 30 .............................C CCATTGTGATTGAGTGAGAGCATGGCTTTC 23992 30 96.7 30 .............................A GTGTTACTGACGTAGACGATGCGAATGCCC 23932 30 93.3 30 ............................AA CACCAATAGAATCATAAACGATTAGCGCGT 23872 30 93.3 30 ............................AC TCAAAGAGAATTCTATTTATAGAGGCAAGT 23812 30 96.7 30 .............................A CCCAGTATTCAAGTACTGGCATGGCAGCTG 23752 30 96.7 30 .............................A GACAAAACCTGATATTTGATCCAAAGCAAA 23692 30 93.3 30 ............................GC CACAAAGAGCGAAACGCCCATGCAAGGTGA 23632 30 93.3 30 ............................AA TAAAAGAACGCGCTCCTGATGTTTTACCAT 23572 30 96.7 30 .............................G AAAAGATTGAAGTTGAAATCATGGTTAAAG 23512 30 100.0 30 .............................. TGGCTGTTGATACGGGGCAAGGGGGTAGTA 23452 30 100.0 30 .............................. TGGGTGAAGTTGCAGAAAATGGTGTGCTCC 23392 30 93.3 30 ............................AG TCGCATTAGCATTTGTGGCCAATAACATTC 23332 30 93.3 30 ............................GA TCAAAAAGAAACAACCGCCTGTACGTCCAC 23272 30 93.3 30 ............................AC ATTAAAGGCTATGGAAAGATCATCTGTCGA 23212 30 96.7 30 ............................A. TTGTTACTATAGAGATATTGTGTTCAAAAA 23152 30 96.7 30 ............................A. AATAACTACGGTTATGAAGATTATGAGTTT 23092 30 96.7 30 .............................G AGTGCGAAGATGATTCAAAGCGATTCATGC 23032 30 96.7 30 ............................A. TCGGTGCCAATACACCGCCAACCCATTTAC 22972 30 93.3 30 ............................CA CCCAAAAACCAGTTGCATTACTTGAATACC 22912 30 96.7 30 ............................A. AGGGCGACTGGATATAGTCATCCTGATGTT 22852 30 96.7 30 ............................A. TAGCTTTTTAAGTCCATCAATTTTTTCTGG 22792 30 96.7 30 .............................A AAGAAAAGCGCAGAACTCAATGAATACAGC 22732 30 100.0 30 .............................. ACAGAACTGGTGAGGGCTGGATTGCTGAAA 22672 30 96.7 30 ............................G. TGGCAAGTTTTCAAACATATCAATATCAAG 22612 30 100.0 30 .............................. CGTTAAACAAATAGTACACACCGCTAAACA 22552 30 100.0 30 .............................. GAGTACAAACATTCCCATCTTCAACGAATA 22492 30 93.3 30 ............................AC TCGGAAATAAATTCTGAATGTTGTCCGTAT 22432 30 96.7 30 .............................G TAGCGCCGTGTTTGATAAGAATTGGTTTTC 22372 30 96.7 30 .............................A AAATATCGGGGTTGATGTTGAGGCCAGCTT 22312 30 93.3 30 ............................AC GGCGCAAGCGAGAACGTTAAGCGACTTGTC 22252 30 96.7 30 .............................G AGTACAAGGCGACGTACCCAACCGATGAGG 22192 30 100.0 30 .............................. GAAAAGCAGCTAAACATGACTGCTTTCATC 22132 30 93.3 30 ............................CG TGGAATGCGTGACATGCAGGAGGACATCAA 22072 30 96.7 30 .............................G ATCGTGCGGATGAGGTTGTAACTGGTTCGA 22012 30 100.0 30 .............................. CCACTGGAAATGATGATCAATGCCGTAACA 21952 30 96.7 30 .............................G TATAGATAAGACACAACTAACCACATCACA 21892 30 100.0 30 .............................. TTCGCTACTCACCTGTTGTCGATTCCTTTA 21832 30 93.3 31 ............................AC GTACCTTCAAATACAGAATACCCGTTTGTCG 21771 30 96.7 30 ............................A. TTCCAAATAGCACGTTGCCTGAGTTCATCT 21711 30 96.7 30 .............................A ACACCGCAATCGTATGTTGCAGCAGGTAAA 21651 30 96.7 30 .............................G AATACAGCACCCCAACAGGTGAAACTATTC 21591 30 96.7 30 .............................A CATGCGCGACAACACTTCAATTCAGATGAT 21531 30 96.7 30 ............................A. TAGGTGAGAAGTGGCATGCGGACCATTTGG 21471 30 96.7 30 ............................A. TACGAGTGCAAATTCTTTCCAAGGGTTAAT 21411 30 93.3 30 ............................GC AAAAGCTCGCATCAATCGTGATCAAGTAAA 21351 30 93.3 30 ............................GA AAGGCGGTTTTTTATTGCGTGGAGAAAAGT 21291 30 100.0 30 .............................. TCAATAATGCAATCGACTGATATGCAATAC 21231 30 100.0 30 .............................. GTGAACGCGTTTAGAACGCGCCACAGGTTT 21171 30 96.7 30 .............................C AAACAAGATAGATTCGGACTTGGCGCATTT 21111 30 96.7 30 ............................A. ATTTGGAGCGAATCGAAGAAAGCGCACGAA 21051 30 93.3 30 ............................GA ATTTGAATAAAACAGCGTGTCAAAAATGGC 20991 30 93.3 30 ............................AC TGGGGTGGGCTGTTGCAACTTTTATTTTTC 20931 30 100.0 30 .............................. CAAGAGCATCGCATCACTGTCGTCATTCTC 20871 30 93.3 30 ............................AA CATGGGAATGTTGTGTACCACTTTATCAAT 20811 30 96.7 30 .............................G GTGTTAGACCTGGAACCAGGGATAAAAGCC 20751 30 96.7 30 .............................G ATTATTAGGAAAAGATATGAGCCATATCAT 20691 30 93.3 30 ............................AA TAACTGTTACGGACTGGTGGAATCGCTCAA 20631 30 96.7 30 .............................C ATTAGTTAAAGTAATTTCACCGCTTTAGCG 20571 30 96.7 30 ............................A. GAGAATACGCATGGCGTTCTTAGGATTACT 20511 30 96.7 30 ............................A. ACGGATAACACTGATCTACCAGTACAAGAA 20451 30 93.3 30 ............................AC CTCTTAGAACTTTTGCTACTTGGCTGACGT 20391 30 93.3 30 ............................CA ATCAACAGTGCCTAGCAATTGCTCTACTGC 20331 30 96.7 30 ............................C. AGCAATTGCTCTACTGCAATAGATAAAGCA 20271 30 100.0 30 .............................. GTAAGGGATTTGATAATAAAATTCATTGAT 20211 30 93.3 30 ............................GA CGACATCACAGATACTTCTGTATCTTTCTC 20151 30 93.3 30 ............................AG AGACTTCATTTGTGTATTCAATGACTTCTT 20091 30 96.7 30 ............................G. CTACAAAAATATGTCAATCGTGGTGCTGTT 20031 30 100.0 30 .............................. AAGGCTGCCCCAGTTGATGGCTCTCTATGT 19971 30 96.7 30 .............................A CGGTTGGTGCTGTCTCGAAAGTTCTTGCGC 19911 30 96.7 30 .............................G AGTATTGCGACAACGATGGAAAAATGTCAC 19851 30 96.7 31 .............................G ACAGGGAATACAAGGGTGATGATTTTGAAAT 19790 30 96.7 30 ............................A. AGACCAGACACAGACACATCACTATTTACA 19730 30 96.7 30 .............................G CTAACAATCAAATTGTCTATAAAACATCAT 19670 30 93.3 30 ............................AA TAGTTCTCTAATTTCTTGTTGTGAATAATA 19610 30 96.7 30 ............................C. GTGTTGTACATCGTTGCGAGAAATATTAAA 19550 30 96.7 30 .............................C ATTAACGGCCAAGCGTGGACACGAGAGCAG 19490 30 96.7 30 .............................C CTCCGCCACTTGGATGCGCGACATTTTATT 19430 30 93.3 30 ............................AG TGAGAGTTTCTTTTCTTGATCTTGTTCAGT 19370 30 96.7 30 ............................A. AAAAGCCCCGATTAATTGGAAAGGGGGCGA 19310 30 100.0 30 .............................. ATCAAGGACGCCTTAAGAAGTATTGCTCAT 19250 30 100.0 30 .............................. TGCTAGCTACACCCTTATTGATTAGATCAA 19190 30 96.7 30 ............................A. GATGTATACAATGTTACGCGCATCTGAGAT 19130 30 100.0 30 .............................. AACGATGTACAATCGCCTGATTTTGAGAAA 19070 30 96.7 30 ............................A. CGAGCAATTGAACCTAGCATTTCCTCTGTA 19010 30 93.3 30 ............................AA TAGAAATTGGATTCACTGCATCAACATTGG 18950 30 96.7 30 ............................A. GGTGTGGAAGCGTTCTGAATCCATGCGAAT 18890 30 93.3 30 ............................CA ATCAGAGCGAGCAACAGTAATTACTAGTGA 18830 30 100.0 30 .............................. TTAAGTATTCACGTTCAGCAATAGTTAAAT 18770 30 96.7 30 ............................G. GACGGAGAAGGGTGATGAAGAAATTAAACG 18710 30 93.3 30 ............................AA AATGCGAATTAACTACGGCAAGAAGTTCAT 18650 30 93.3 30 ............................AC CCGATAATGGCCGACCATTGTCGTCAAAGA 18590 30 93.3 30 ............................AA TTTGTCAGTGTCTGCGGCGACTCATCAATA 18530 30 93.3 30 ............................AA AATACTCACTCACTACTGCTGACAACGTAT 18470 30 96.7 30 .............................C GAAAGTCATGGGATCAGATTGGAAAGATGC 18410 30 96.7 30 ............................A. CGTCATAAGCATTTAATCGAATACCCTCAA 18350 30 96.7 30 ............................A. CTAGTGTTATTGGGTGGGTAAAACGATTTA 18290 30 96.7 30 .............................G TTTGACCTGAATCCAAAACCAAATTAAAAG 18230 30 96.7 30 ............................G. ACAGGCTAATGTTAAGCCATGTCGGGTGGG 18170 30 96.7 30 ............................A. TCGGGGGTGATGTGAGTAAGCAAAACGATA 18110 30 100.0 30 .............................. CACCCCGACTTTGTAATTTCCTCCGACATT 18050 30 96.7 30 .............................G ATTCAACGGGTGGCAAAAATAAAGCTGAAT 17990 30 100.0 30 .............................. ACAGCGCAGGGATGTGCTGCGGGTATAGTA 17930 30 93.3 30 ............................AG CAATTCATGGTATGGGTTTTATTAGCGAAT 17870 30 93.3 30 .............C..............A. AAAGCAATATTGACCAATAAAAGTAAGCGT 17810 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== =============================== ================== 162 30 96.2 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGTAAATGGCTAGAACGATTCATTGATTATGTTCATATCATTCAACCGAGAGAAGTACCTCAAGCTAAAGTTACTGGTCATGCACACTATTATCGAGTCAATCCAAAGATGGGGATTGAGGAACGTATAGTTCATCAAGCGCAACGTCGAAAAATTTCTTTGGATGAAGCTAAGCAACATTTTAAACAATATATTGAACAACCTATCATTGAGCCTTATGTGAGTTTAAAAAGTCTGAGTGCTAAACGAGAACAAAATATAGATCGACCATATCGTTTATATATTGGTAAATCTCTTGTTGATGAGGCAAAAGATGGAGAGTTTGGAACGTATGGACTAAGTCGAATGGCAACAGTTCCAGAATTTTGACCCAATATTTTTTTACTCTTTAACAGCTCAATAAAATCAATAAGTTACACCAAGTCATTTTTTGGTTGGGTAAATTGCTAAAAACCATCATAAATACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : CATGTGATTTATTCATATGAGCCATTTAGAAATGTAACGGTCTTGATTGGCATTTGTTCTGTGTGTTCATTACGGAATTTATTTTAAGAATTAATAAGTGACTTATAATTCTTGTTCCAAAATTATCGTGTTATATGTCATTTAAAATACATAACATCAAGAAATATGATTCTTACTACATTCTAGATCTTTAATTTTTAAATAAGAAAATATACCCTGAAACTAACGTTTTTTTAGTGAAATTTTCATGCGTGGTTTATACCTCATCACCAATGATGATCCCATTCAGCTTCTTTTAGAAAAGTTAGAGGCTGCACTAGCTACTGGTCATATAGCTATTTTGCAATATCGTCGAAAAAAAATAGAAAAAATAAATCAACCATCTGAAGTGGAGTTGATCAAAGTCCTGAGTGAAAAATATCAAGTCCCTTTTGTCATTAATGATGATTTGGCGTTAGCAGAACAATTTGGTTTAGGTGTGCATCTAGGGCAGTCCGATG # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.24, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //