Array 1 614-165 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHYAJ010000132.1 Pseudomonas aeruginosa strain CriePir207 NODE_132_length_14033_cov_54.963325, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 613 28 100.0 33 ............................ GAAACTGTCCTTGATCTGCCCGCCTTGCTGGAT 552 28 100.0 32 ............................ GCTGGCCGAGACCGACAAGTCGAAGCGCACGG 492 28 100.0 32 ............................ TGTTCGTAGCCGATATCGCTGCACGCGATGCA 432 28 100.0 32 ............................ GAGGGGCCGTATCGACGGTGATTGATGCGACA 372 28 100.0 32 ............................ AGCAAGGCATCCGGAAACGGGCCTTGGGTCAC 312 28 100.0 32 ............................ AAGGAGCACCACGACATGGTCAGAGCAAACCC 252 28 100.0 32 ............................ TCCTAGTTCTTCGCCAAGCCGGAAACCGAGGC 192 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 8 28 100.0 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTTTGGTGGTTTTTTAAAGCCCTTTTAGATCAAAGGGTTAGAGATCGCTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGAGCTTGGAAGGTTGATGGGGTTTTGGTCTA # Right flank : AGTAGGAACGCCATCCACTCGAGGTCATGGCGCGTTCACTGTGTAGTGGTCTACTGATCCCGGACACCGATTTAGGCGAGAATCCTCGCCGTGAGAGAGGTGTCTGATGAGCAAGCAACGACGTACGTTTTCCGCCGAGTTCAAACGAGAGGCTGCCGCCCTGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 12099-13506 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHYAJ010000081.1 Pseudomonas aeruginosa strain CriePir207 NODE_81_length_22289_cov_69.918103, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 12099 28 100.0 32 ............................ ATCAGTCGATCCGATCCAGCGTGCCGTTGAGC 12159 28 100.0 32 ............................ TGCCACCCTGTCCGCCGTCGCAGTATCCGTAC 12219 28 100.0 32 ............................ ATGTCCCAGAGCTTGCCAAGCTGCTGGGCCGC 12279 28 100.0 32 ............................ TCGTCGTTGATGCTTTTCAATATCTTTGATGC 12339 28 100.0 32 ............................ GATCGACCTGGTGCATACGCTCCGCCTCGATG 12399 28 100.0 32 ............................ TGATATCCAGCTGCTCCAGGAACCGCTGGCGG 12459 28 100.0 32 ............................ TCTGCGGACGCCAGGCGCCCGGCCAACACGCC 12519 28 100.0 32 ............................ ATCACGAAAACGCGGCGGCCGTACCGGTTGCC 12579 28 100.0 32 ............................ ACATGCCGATCCTGCTTAAGCGACGGGATAAT 12639 28 100.0 32 ............................ AGCACCAGGACCGAACCAGGCGGCGCAAAGTC 12699 28 100.0 32 ............................ CGTCCTGGACTACGAGCACCAGACCCTAAAGA 12759 28 100.0 32 ............................ TCGACAAATATCCTGCAAAGCGAATCAGCCGT 12819 28 100.0 32 ............................ ACAACAGCCGTTCGTCGGAGTTGACCATGCGT 12879 28 100.0 32 ............................ TCGGATTGGAGCGAGTTGGAGAAGCTACAGAC 12939 28 100.0 32 ............................ TCTCCGCCCCAGCTATTGCCGGGGAGGGCATG 12999 28 100.0 32 ............................ ATAAAGCACTTCCACGCCGCGCTTGATGCTCT 13059 28 100.0 32 ............................ ACCGCCGGCCAGCACACCCCTTGGTCGTTCGC 13119 28 100.0 32 ............................ TCTTTGCAATCTACAACAACCCTGATCGACGA 13179 28 100.0 32 ............................ AATATGAACATTAGGTACATATCAGGCGGGAA 13239 28 100.0 32 ............................ TTCACGTTGGGCGTAGGACAGCGCGTCCTGCC 13299 28 100.0 32 ............................ AACAGCATGGCGTCCACCCGTACCGCCCTCAT 13359 28 100.0 32 ............................ TACCGTGGCGACGTTGCAACCCGCTGGTCCGA 13419 28 100.0 32 ............................ TTGAGCACAACCGGCTGAGCCAGCTGGTTGTC 13479 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 24 28 100.0 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : ACATGTGTCCGCGTAGCGCCACCTTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCCGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGTGGCATCGCCCATCACAGGACCTTTCGCGCCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGTAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGAAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTA # Right flank : ACTCGAACCCACCTCGGCCACAACAGCCGCCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCCACTACCAAACATCCGAATATAAAGTTCCTACCCCGCCCGCCAGCCTCGCCCGTCCACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACAGTTGCCTTGGCGCAGAATTCGATAGGGACAGGCCACGGTCAGCATGGACGACATTTCTCCCAGCGAACTGAAGACGATCCTTCACTCCAAGCGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACCGGTACCTCCATTACCCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGTATTGGTAGGCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //