Array 1 61909-62406 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PRBA01000007.1 Campylobacter jejuni strain CB346 7, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     61909	    36	  97.2	    30	T...................................	TAATGCTCCGCTCGTTGTGAATAGTGACAT	
     61975	    36	 100.0	    30	....................................	TTAAATAGACACGCAAGCCCAGTGCTACCA	
     62041	    36	 100.0	    30	....................................	TTAAGTGGCAATACACTATCTAAAGGAATG	
     62107	    36	 100.0	    30	....................................	TGTTTAATCTCACATAATCTATTTAAGTCA	
     62173	    36	 100.0	    30	....................................	TGTAATACAACTACATTTGAAAATAACAAA	
     62239	    36	 100.0	    30	....................................	TTCTAAGTTTGCATAATTAAATTTAGTTGA	
     62305	    36	 100.0	    30	....................................	CCTATTTTTAAAGGTTTAGTAGAAGGTTTA	
     62371	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
         8	    36	  99.7	    30	GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	                              	       

# Left flank :   GACATAAAACCAGGCAGACATATCAAAATAGCCAAGGCTAATGAAAAATTCATTATCGCCTTACCAGGTTTTCCTTACTCGGCTATGGTAATGTTTAATCTTTACGCAAGAGAGATTTTAAACTCTTGGTTACTTCAGCCTAAAGACTATATTTGCAAAGCCTTCTTACAAGGAAGCTACAAGAAAAAAACACCTTATTTGGAATTTGTCGCTTGTAACATAAAGTTTGAAAATGGACGCATTTTAGCTAATCTTGAAGGTAAAAAAGAAGGCTCTAGTGCGATTATAAACAATCTTAACAATAAAGCTGCCCTTATGGTGGTGCCAAAAGAATGTGAAATGTTAGAAAATGAAAGTTTAGTGGATATTATCTTTATGCCTTAAAATTATTTAAATAATTTTATTTCGATTTTAATCAACCCTAAATTTCAATAAATTTCAAATTTGCAACCTCCTTGTAGTGGAGTAATTAACCCTAGCGGAGTTTCAATCCACTAGGG
# Right flank :  TAGATATTTACCAGATAATGAAAATTTCAGGGTTTTTTAATAAAAATAGCAAAAATTATGCTATAATCTCATAAGAAATTTAAAAAGGGACTAAAATAAAGAGTTTGCGGGACTCTGCGAGGTTACAATCCTCTAAAACCGCTTTTAAAATTCAAATAAATTTTGCTGGTGATATTTTTCTTGTTTTTTGTTTATTTGAATTTCTTCATTATTTGAATTTTTGTATTTAAATTCTCCATGACTATCTATATCAAAAAGCGTTAAATTAGTTTCGTTATTAACTTTTTCGTTAAAAACTATGCCACCAAGCAAAAGCTCCATTTTATCAAACTGCTTTTCAGTGATGATTAAAGCCCTTACATTTCCATAAGGTGGCAAAATCTTTTTTACATTTTCAATAGAACTTTTTGCGGAACTTAAACCCTTGCAAATACGCATATAAACGCTAAATTGCAGCATAAAATAACCTAATTTTATAAGATTGTTTCTAAATTTACTTG

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:78.38%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [1-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [56.7-78.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0.27   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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