Array 1 97795-93345 **** Predicted by CRISPRDetect 2.4 *** >NZ_QIWQ01000006.1 Klebsiella pneumoniae strain WUSM_KP_58 NODE_6_length_272464_cov_22.2515, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 97794 29 100.0 32 ............................. CGATGCCGGATCCCGAGTTTATCCCCGCCGGT 97733 29 100.0 32 ............................. ATATTAAAGGTTTTAATGCGATCTACCTTTAC 97672 29 100.0 32 ............................. ACGGATCAGTAGTTACTGACGGATCGCCCCCA 97611 29 100.0 32 ............................. CTGTGCGAGTTCGGCATGACACCGGCCAGCCG 97550 29 100.0 32 ............................. GAGGGGGCCGAGGGAGCAGTGATCAGCAACGT 97489 29 100.0 32 ............................. CCAAACACAGATTTTCGTAACGTTATCCGGGT 97428 29 100.0 32 ............................. TTTTTTTTCGATCCCCTCCCCACCACTAAACG 97367 29 100.0 32 ............................. CGCCGTTATCCAGAGCAAATGACTGAGTAACC 97306 29 100.0 32 ............................. GCCAGAGCGGTGAAGCGCCAGCGCCGCGCCCG 97245 29 100.0 32 ............................. TCGCTCACCCTGAGCCGCCAGACCGGCACGTG 97184 29 100.0 32 ............................. GGCCCCAAAGGCGAAGAGGCACCGGCCTACGG 97123 29 100.0 32 ............................. CAATGGTGATGGACTATGACCGATAGCAGCGT 97062 29 100.0 32 ............................. CAATATATGGTGTGCTGACGGGCTGTAAAAAT 97001 29 100.0 32 ............................. GATAATGACTGACAATATCTTACCCGCTACCG 96940 29 100.0 32 ............................. GTATTGATAACCTTTAGGATTTATAGAAATGG 96879 29 100.0 32 ............................. TGCTTCCAGCATTTCCGGTGCTGAGGCGATTA 96818 29 100.0 33 ............................. TGGTGCCGCTGAAATTAGCGCCGCTTACCAGGC 96756 29 100.0 32 ............................. CCCTGCGGTGCGCCAGTTCCCTTATTGGTGGC 96695 29 100.0 32 ............................. GCGCAACTTAAACTGTGGGTCTTCTCTGGACA 96634 29 100.0 32 ............................. ATCAACTGATTCGCTCAGCCTGGGAAGATGCA 96573 29 100.0 32 ............................. AATCTGGCACTCGCTTCCGGTGATATTCTCTA 96512 29 100.0 32 ............................. CAGAAAGTCACTTAGCATCGCCTTTCTCCTGT 96451 29 100.0 32 ............................. TCCTATCAGACCAGGATTAACCCGCCTTTCCT 96390 29 100.0 32 ............................. GAATTTCAGTCCAGAAATATTTATCCAGAGGA 96329 29 100.0 32 ............................. CTGGTGGAGCGCGCAGAACTGTATTCGACAAC 96268 29 100.0 32 ............................. GTGGCCTTTCATGACCGTTTCCGAGCATGGAC 96207 29 100.0 32 ............................. CACAGTCTGTTTTCCAGAATGTGCATGGTGCA 96146 29 100.0 32 ............................. TCATCCAGCAGGACAAAGCCAGAAAACTCTTC 96085 29 100.0 32 ............................. CAACTCCGCAGCGCCTGGGAGGGGTTTCGGAT 96024 29 100.0 32 ............................. CTGGTCCCTTTCTTGAATCCGCCGGATGCTGG 95963 29 100.0 1 ............................. G Deletion [95934] 95934 28 86.2 32 ...C.G.G-.................... TACACAAAAACGTTTTACAGTTGCGCAGCGCT A,G [95923,95930] 95872 29 100.0 32 ............................. TGCGCGGCAGAATCGTCGCCGTCCCGCCCGGT 95811 29 100.0 32 ............................. CAGGTCATGATGAAGACCTATCCGCTGGCCGA 95750 29 100.0 32 ............................. GGATTCACCTCGACCTGCTACGACGGACAGTA 95689 29 100.0 32 ............................. GCGACGGCGTGGATAGTCGGGATTTCACGCTA 95628 29 100.0 32 ............................. CCGGTTGACCGCACGGCGCCAGCGCGCCCCTT 95567 29 100.0 32 ............................. GCCGGCAATTTCTCGTTGAGGGCGCAGTTCAG 95506 29 100.0 32 ............................. TTGAACGATTCGGTTACCATCGCCTCCTGCGA 95445 29 100.0 32 ............................. ACACCCGAGATTTACCTGTCAGCCAGCGGCGG 95384 29 100.0 32 ............................. TAATGAATAGCAATTATCCATTTTTAGTAGGG 95323 29 100.0 32 ............................. GCTGCGTTGCCGTATTTACTCGCAGCGGTGGT 95262 29 100.0 32 ............................. CTGTCGGCCCGCCAGCGCTCAATAGGCGCTAC 95201 29 100.0 32 ............................. TGTTAGCTGAGTGTCGCCGGCACCGATATATT 95140 29 100.0 32 ............................. GGAAACCAGTTGCCGATATGCCCCGTAAACGC 95079 29 100.0 32 ............................. AACTCATGACGGGCAAGCGGGTCGCCACCGTT 95018 29 100.0 32 ............................. CGCTCTCTGGTATGTACTGCAACGTGCGATTC 94957 29 100.0 32 ............................. GTAAATAACGATTATGCACTAGAGGAGTTGTC 94896 29 100.0 32 ............................. TCATGCAGCAGATACAGAAAAAGGCTGGGCCG 94835 29 96.6 32 ............................A TATGCAGGCCGCAATTGCCTGTAGCTGCTGCC 94774 29 100.0 32 ............................. GGTGGAACCAATGTCGCCAAAGCAATCGGAGT 94713 29 100.0 32 ............................. AACTGTCCGACGTGGTCGCCGGTCGTGATATG 94652 29 100.0 32 ............................. GGGATAATCTCAGAGTGTAAGTCATTGTCACA 94591 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 94530 29 100.0 32 ............................. TTATTATATCTTCACGGTGAGGGAATGGTCCC 94469 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 94408 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 94347 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 94286 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 94225 29 100.0 32 ............................. TGCTAACCGGCACGTTTACCCGGACGAACACC 94164 29 100.0 32 ............................. CTGATCCCCTCCAACAACACGCCAGGCACAGC 94103 29 100.0 32 ............................. CGGTTAGCAATCCCGGGCACGCTATGGATACC 94042 29 100.0 32 ............................. CGGGGATCAAAAGTTGCCACACCGTCAAAATG 93981 29 100.0 32 ............................. GGGCTGAATGGCGAAAATATTGGCGATCTGTT 93920 29 100.0 32 ............................. TCGACGGTAACCCGTGGAGCAAACTGGAGCCG 93859 29 100.0 32 ............................. GAGGCACTGGGTGAATTATATGTTGAGATTGA 93798 29 100.0 32 ............................. CAGGAAAAGGCGATACAAAAGGCAGTGAGCGA 93737 29 100.0 32 ............................. TGCGGCATCGCTCTTCATGACTGGCGATATGT 93676 28 96.6 32 ........-.................... AGCTACTGGCCGCCAGCCACTGGATGACGTTG 93616 29 100.0 32 ............................. CCGTGAGCCGTGCTCCTCGGTCGCCATCCCCA 93555 29 100.0 34 ............................. CGAACCAATAAGCGCCCCTTGCCGAGTGACTCCC 93492 29 100.0 32 ............................. GGATTTCCATCTCCGGCGTCTGACTACGTTGA 93431 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 93373 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================== ================== 74 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGTGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGACCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //