Array 1 21783-21571 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHRDS010000020.1 Komagataeibacter melomenusus strain SI3083 NODE_20_length_58460_cov_68.542095, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 21782 29 100.0 32 ............................. GATGCGCAGGATTTGCCGACTGTGAATAGCCT 21721 29 100.0 32 ............................. CCGCACGTGCGCATGATTTACGCCATCTGGAA 21660 29 96.6 32 ..................A.......... CCCGGCGCAGGCAGGCAATCCGCTCTTCGGTC 21599 29 86.2 0 ............T....A.....A....T | ========== ====== ====== ====== ============================= ================================ ================== 4 29 95.7 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : GGCCGATGGCTGCCACAACTTTCGTGTGTTTTCGGTTGAGGGCACCACGCTCAACCGCAAGCGCATCGATGCGTACGTGGCGGGCTCGGTCATGCTGGTGACCGCCCTCAGCCCCGAAATCGGCTACGACCGGGCCTCGGCCATCGCCCATCAGGCCATGGAGCACGATATCAGCCTGCGCGAGGCGGCGCTGGCTTCCGGCTTTGTCGATGGTGCGACCTTTGACCGCCTCGTCCGCCCGCTCGATATGGTGGGCAAGGGCGTGGGCGGGGCCTGACAAGATAAAAATTTCCGGGTGCCGCCTTTTTTCAAAAAAGGCGGCCTTCTTCGAAGCCTGTTGAAAAAAGCGGCACCCGGATGATGCCCGCCTGCGCTGTGGCGCGAACCCTGACGATGATCCTTTCCCGGGGGCATGAAAAGGGGTAGGTAAAAAGGGCGCTTTGGTTGGTAGTTTCTTTGACAGTAAAATAAGGATGTGGAATCAATAGGTTCCACGAAGA # Right flank : GTTTCATTTACGAAGGCGCTGCGCCCTGCGTGTTGACCTGCAGCGTGAACAGCGTATCGCCCGCGCACATGAACACTACATCACGCTTGGGGCCGCCGAAGGTCAGGTTCGACACCCCGCGCGGCAGGCGGATGCGCCCGATCATGTGGCCATGGGGGTTGTACACCACCACGCCACACAGCCCCAGCGGCCCGTTGGCCCCGCACCACAGATTGCCGAAAATGTCGGTGCGCATGCCATCGGGGATCATCGCATGCCCATTCAGCATCATGTCGGCAAACGGGCGCAGGTTGCGCACGTCGCTCCCCGCCACGTCGGCTGCATGAATGCGCCCGTCGCCGCCATGGCCGTCCTGCCCTGGCCCCGGCCCGTCGGAGATGACATAGACAATCTTGCCATCGGGCGAGAACGCGATGCCGTTGGGGTCAGGCAACTGCTTTTCGCCCAGCACGGCCTTCACCTCGCCCGTGGCCGGGTCGATGCGGAAGACATGGTCCTCC # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 84679-85439 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHRDS010000006.1 Komagataeibacter melomenusus strain SI3083 NODE_6_length_150349_cov_57.938771, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 84679 29 100.0 32 ............................. AGCATGGCCTCGGCCCAGTCGGGCATGGCCTC 84740 29 100.0 32 ............................. GCCCTCAAGGGCAGGAATGGCAGTGATATTCG 84801 29 100.0 32 ............................. GTGTGACCTCATGCGAAAGCCTTTTGTAAATA 84862 29 100.0 32 ............................. CCGAATACTGGATGCGGGTGAGCAACCTGCTG 84923 29 100.0 32 ............................. CAGGATAACGTGGGCCTGTATAATGCCCTCGT 84984 29 100.0 32 ............................. GAGCGCAATCCGGGGCGCTACTTCTTTTTCGA 85045 29 100.0 32 ............................. CCGCTCTCTTGCGTCCCACCAGTTGAGGGCCA 85106 29 100.0 32 ............................. AACGACAGGCGCGGCGCGCCCTTGGGGTCGAT 85167 29 100.0 32 ............................. CAGTTCCTGCCGCTGTGCCGCGCGCGTGATAT 85228 29 96.6 32 ....................A........ AACGCTACGTTGCATCTGTTCCTACTGCCGGT 85289 29 100.0 32 ............................. GGCAGGCACAGGCCGCCGGTTGACGCGCACGC 85350 29 96.6 32 ............T................ GCACCAGCAGGCACGGGTAAGACTCGGCACAT 85411 29 93.1 0 .......................A..A.. | ========== ====== ====== ====== ============================= ================================ ================== 13 29 98.9 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : TGCTGGCGGCAGGCGGCCTGCAACCACCGCCTGCGCAGGAGGAAGCCATGCCGGTGGCCTTTACTGAGATGAAAGGGCTGGGCGATGCTGGTCATCGTGGTTGAAAACGCGGCGCCACGCCTGCGCGGGCGGCTGGCGGTCTGGCTGCTTGAAGTGCGGGCAGGCGTTTATGTTGGCAGCTACGGGCGGCGCGTGCGCGAGATGATATGGGGGCAGGTCTGCGCCTATATCGAGGCGGGCAATGCCGTTATGGCATGGGCGGCCCCCAATGATGCCGGTTTCGCGTTTGATACCTGCGGCCAGAACCGCCGGGTGCCGGTCGATTTCGATGGCCTGCGTTTGGTTGCCTTTGGGCCGGAAGCCGCCCTGCCCACGCAACCCGGCCCGGCTACAACGACCCTTCCGCGACGGCGTGGAAAAGGGTAGCAAAACAGGGCGTTTTGGTTGGTAGATTCTTTGACAGTTAAATAAGACTTTGGAATCAATTGGTTCCACGAAGA # Right flank : GGGCGGGCATTCCCGCAGGACCCGCCGCAGGGCGGAATGTGATCTGCCTTGCAGCCCTGAACCGTCAGTGCAAGACTGCGCTTTTCCAGGTGTCGGCATGACAGGGCCTCAAAGGTAACTTCCGCCAGGGGCTGGCTGCGGCCTGGAGCGGGAAAGTCTGTTTCAGTCCCCATGGCTGGCGGGCATCATGCTGCCGCGCGGGGCGAAGAACCTTGTGCCCGCGCAGGAAAACAATACTCTGAACAGGGTGGAAACAACATGAAAACCATTGGTTATGCCGCGCGTGATGCACAAACCCCGCTGGCACCCTATACCTTCGAGCGCCGTGCGTTGCGCGATAATGATGTGGCCCTCGAAATCCTGTACTGTGGCGTCTGCCACTCCGACCTGCACCAGAGCCGTGATGACTGGAAGGAGTGGGGCCCAACACTCTACCCCTGCGTGCCGGGGCATGAAATCATTGGCCAGGTCGTGGCCGTCGGCCCCAAGGTGACGCGCCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 100498-101075 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHRDS010000007.1 Komagataeibacter melomenusus strain SI3083 NODE_7_length_122681_cov_73.317109, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 100498 29 100.0 32 ............................. AAATCCCCTGAACTCCAAACGTGAACCCTTGA 100559 29 100.0 32 ............................. GCACCGGCCACGCGGCGGATGCCGGTGGCATC 100620 29 100.0 32 ............................. GTGTCATGCGACATCGCATACTTTGACCCCCC 100681 29 96.6 32 ............................A CGACCCGACCGAAATCCTGCGGGCCGCATCCG 100742 29 100.0 32 ............................. AAATACGGTTTCCAGAGCGCGCTCAAATACGC 100803 29 100.0 32 ............................. GCGACGGCGCTGGATCAGATGGCGGCACGCGG 100864 29 100.0 32 ............................. GAGCTGCCCGAGCTGGTGCGCATCGAGGTGGA 100925 29 100.0 32 ............................. ACGAGGAAATCCGCGAGGAAATCGCGAAAGCC 100986 29 100.0 32 ............................. GCATTGGGTGGCAATTACACCGTGCTGCGCGA 101047 29 86.2 0 .................A........GGA | ========== ====== ====== ====== ============================= ================================ ================== 10 29 98.3 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CCGAGGCAGGCAATTTTCCCGAACTGGCCGAGACGTTCTGGAAGCATGGCCCGCAGAAGGCCATCAACATCCTTTCCGCCTGGCTGATGCAGCATAATGATTCCGGCGTGCTGAACATCCCCGACCCGGTTTTTGCCGCCGAGCAGTTCTACGCCCTGTGCCAGACCCGCATTACCGCGCGTTCGCGCCTGCAACTGCCGGTCAGTACTGATCAGGCGCATATCGATTTCATTGCGCGTTCGGCGGTGCGCACCTTCCTCAATGCCTATCTGCGCGAAGGACCGCGCCTGCCGCCGGTGGTGATGGAGGGATGAAGGCGGGTTCTGACGAGGCTTTTTGAAAAACGCCGCACCCGGATGTTGCCTGCCTGCGCTGCAGCGTGAAACCTGTGGATGATCCTTTTCCGGGGGCACGAAAAGAGGTAGGGAAAAAGGGACGTTTGGGCTGGTAGTTTCTTTGACAGTAAAATAAGGCTGTGGAATCAATAGATTCCACGAAGA # Right flank : ACCTTTATGTAAGCTGCTCGCGCCTAATCGCACTGATAGACGACACGCGCCCGGTCAAACCGGCGGGCCGCGATATCAGCCTCGTGCATCATCACGTAATAGGCCCCGACATCGGCAAGCCGCGCATGCGGGTCTGCCCCGATCTGCACGACAAGCCGCCACGCCGGGGCAGACTTGAGCAGTGCCTTTGCCTGGGCCGTGCTCCATACATCGCCCCCGCAGTTCAGGCCATTGGCGGCAAGCTGGCTGCGGGCCTGAAGGCCGTTCTGTAAAGGTTGCGGAAAGCCGCCAAACTGGTGGTTGTCACGCCCAGCCTCATCGGGCGTGCCGAAGGCGCAGAACCACCCGTCATAGGCCGCGAATTCCGCATTGTAATCCAAGGGAAAGGCATCCCATCCCTTGTCATTGTACGGCATGGGCGTGATGACGGAGCGCGGCGTGGTCACGGGGGCGGGGGGAAAGACGCAGTTCCACTCATCGTTCGAGATCGCCAGCAGGGC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //