Array 1 1713-60 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAJS01000023.1 Bacteroides graminisolvens DSM 19988 = JCM 15093, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 1712 29 100.0 34 ............................. AAAGCTAAGCAAGCAAATGCTGGACTTGAAAAAT 1649 29 100.0 35 ............................. TCAATCATTTCATACGTACCATATTCTATTCTTTC 1585 29 100.0 36 ............................. TACGCAATTGACGCGTTAAGCTATACCGAAGCTGAA 1520 29 100.0 37 ............................. TTAAAGCGGCTAGAAGTGCCGTTTTGAAACGATTGCA 1454 29 100.0 37 ............................. AAAAAAACGGTTTGATTGATAGTATCGGTTCGCGCGA 1388 29 100.0 37 ............................. TAATTAAAGTTTAGGTTAAATAAAACAATTACTCTTC 1322 29 100.0 34 ............................. TGGCATAACCTGATAAGAGTCTACATTGACATAG 1259 29 100.0 36 ............................. GCAGGAGCTTTTTAAACGCACTGAGGGCTATGCCGA 1194 29 100.0 37 ............................. GCCCACAACGCTGCTCTGGAGAAAATGCCCCGCTATA 1128 29 100.0 37 ............................. TGTAAATGCGCGTACCTGAAACTAATTTTACTTTATC 1062 29 100.0 36 ............................. CTTCTTTTTGCGGCAGTCATAGTACGCTTCTAACAT 997 29 100.0 36 ............................. TCAACTGGATAATGTGCGCTCGCCTACCTTGCCCTT 932 29 100.0 35 ............................. TCCACAAATGGTTTCAGGAAGTTTTTCCTACAACC 868 29 100.0 38 ............................. CAATAGCTTAGTGGGTGACTCCGTGGGAGCTACCACAA 801 29 100.0 34 ............................. ATTCTTTTTGCGAAGCAATAAGTTCGTCCAATAA 738 29 100.0 38 ............................. CAATGTCAGTCGATAAGTTTTTTCGCCAACCTCTTCCA 671 29 100.0 36 ............................. GCGAATATGGCATCTTCACACTTATTGTACGACGAC 606 29 100.0 36 ............................. ATTCTTTCTTGCCTAAACAGTTAGGAAATACAGCCT 541 29 100.0 36 ............................. TATGGAAATGGTCTATCCACACTGTAAAATTCATAA 476 29 100.0 36 ............................. CTGAATAACCCCGAATAGTAATCGAATTGCTTCTTG 411 29 100.0 35 ............................. ATTGAAAAAAAACTCAAAGTTCTATGTATTTAGGA 347 29 100.0 36 ............................. TGCTATTGAAAGCAAAGCGGTAAGATGTTTTTTTTA 282 29 100.0 36 ............................. AAATGCATCTCTATATAGAGGATTTACCTCGTCTGA 217 29 100.0 36 ............................. TATTATCCAGGTTCTCACAGGTTAATGCATCATCAA 152 29 100.0 35 ............................. TGTGTGCAGACAAGGCCTTCATACCGGTAACGAGA 88 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 26 29 100.0 36 CTTTTAATTGTACCTTATGGAATTGAAAC # Left flank : CTTTTAAAATGTATTGGTAGCTTATGTATGTTGTTTTAGTTTACGACTTTGGGGAGAAGCGAGTTGCCAAAATGTTGAAACTTTGTAGGAAGTATCTGAATTGGATTCAAAACTCTGTTTTTGAGGGAGAGATATCTGAGGTTCGTTTGCATGAATTGCTTATATCTGCGAAAAAGATAATGAAAGAAGAGAGCGATAGTATTATTATTTTTAAAGGCAGAGATATCAGATGGACTGAGAAGCAGATAGTTGGTAGAGAGCGCAGTAATATTGATATTTTTTTATAGTAAGTTGTCGATGTTGATTTTATCTACTTGTGATTCTTGCTAAATTGAAGATTATAGCTCTTTGACTTATTGATTATCTACATTATATGGGTTATGTCGATCGCCAGAGATTTTTATATTACTGACAATCGACATTTTTTAGAACGTTTTTTTCTATCTTTGGACTTCATAAATGCTTTATTATTACGGAATTTCCCGTTTAGCATTTTGAGG # Right flank : CATACTTATAACGGCTGCAATAAGTCTGTTAGAGTATACTTTTAATTGTACCTTATGGAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATTGTACCTTATGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 1 4694-82 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAJS01000051.1 Bacteroides graminisolvens DSM 19988 = JCM 15093, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 4693 29 100.0 35 ............................. CAAAAAAAGACGCCATGATAGTAACATACGGGATC 4629 29 100.0 35 ............................. AGGTGACTCAGACTCGAGACGGCAGCAATACTATC 4565 29 100.0 35 ............................. TTCAATGTTCGCTTTCGCTGAAGCATTGTCGGCAA 4501 29 100.0 36 ............................. ACCAAACATTCATCTTAATATAACCCTCAATCGAAT 4436 29 100.0 34 ............................. ATACAGAGGGCTTAAGTTATCAGGCCTCTATTAA 4373 29 100.0 34 ............................. CAAGACGGGAAAAAGCGTTTTGCGGGGTCAGTTG 4310 29 100.0 36 ............................. GAATTCAGGTTTATACATAATTGGCAAATTGTCACT 4245 29 100.0 35 ............................. AGGAATACATGGCGCAGTTTGCGGAAACGAGTAAG 4181 29 100.0 35 ............................. TTAAAAGACATTCTTCGGTGTAGTACTTGACTTTT 4117 29 100.0 36 ............................. AACGATTAAAGCAAAATGTTGTGCGAACGACTGTAT 4052 29 100.0 36 ............................. ACTTAAATACTCGGTATCAAGTTTATAAGTAGTTTT 3987 29 100.0 34 ............................. CAGAGACTTTTAAAATTACAAGATGATGGGATAG 3924 29 100.0 36 ............................. GCACATTATAAGAGTTTGCTTGTAACCATTTAAGTT 3859 29 100.0 36 ............................. TGAATGGACTTAATGCTAATGATAGATGCTCATTGC 3794 29 100.0 32 ............................. ACCTCAAATCTTGTGAGGAACTTTTGCGTTCG 3733 29 100.0 33 ............................. GCGAAAACGGCAAGACTGCATAATCATTGATTT 3671 29 100.0 36 ............................. GCCGTTCGTCAAGTGCCTCCTTCTGCCACGGTATGA 3606 29 100.0 36 ............................. AAGAACTCATATACTTGCTTAGCTAGTTCCGGCTGT 3541 29 100.0 36 ............................. AACAATCAGTCCGGCTCTCCTAGGTATTCAAGTATG 3476 29 100.0 36 ............................. TCAGGTAGGTAGGCACGCCAACAAACTCACTTACCA 3411 29 100.0 36 ............................. GTCGTTAAAAAAGAACCAAATCGGGTCATGTTTGAT 3346 29 100.0 38 ............................. ATGACAATGTTCTTGCTATATTGTAAGTAGCTTCTGTA 3279 29 100.0 36 ............................. TGGAAGTAGCAAGACAATCAGCGATAAAGGTTATTT 3214 29 100.0 34 ............................. GGGCAACCTGAATACCTGATATGCACAAGTTTGG 3151 29 100.0 36 ............................. AAATAAAGTTGCTACCGTGCAGGCTGATGATAAGAA 3086 29 100.0 36 ............................. AGTAGTACTATACAGTCTCCCGATCCTTTGGCTAAT 3021 29 100.0 37 ............................. TCCTTACCGGTAAAATCCTTCACGTTACGTTTGCCCC 2955 29 100.0 36 ............................. ACTTTTCGGGAACGGTGCACAGCAAACGGCTTTCTC 2890 29 100.0 36 ............................. CATTGAAGAAGCAAGAAGCAACCGCATGGATTAAAG 2825 29 100.0 34 ............................. AGGTGGTAGCATCGGCTACCAAGTTAGTAGCTGC 2762 29 100.0 37 ............................. ATTATAATAAGAAGCAGTATTGACATAGCCAAGGATG 2696 29 100.0 36 ............................. CTTGAAAAGACTAATAAGTCTGTTGGTGTGGATATG 2631 29 100.0 37 ............................. AATTATACCTTCTTTTACACATTCAATAAATACATAC 2565 29 100.0 37 ............................. ATATATCTATTGAAGTAACTATTGAAAACTTTGAGTT 2499 29 100.0 36 ............................. AAAACAGAGGGTTTGGCAGCCGTCAAGGTAACGGTT 2434 29 100.0 34 ............................. AGCGGTATGATAATGACATGGCCGATGATACTAC 2371 29 100.0 35 ............................. GCGTAAACTCTTTTTTTGTTGCCGCGCCTGTGCTT 2307 29 100.0 34 ............................. ATCAATGAATTGAGCTACCCATGAATCTGGATCG 2244 29 100.0 35 ............................. TACCTGTACCTCAGGGGATTGATTGTACAGGACAT 2180 29 100.0 34 ............................. GAAATACCAGACTGGAGTACATCCTGGTTATCTT 2117 29 100.0 36 ............................. GTATGGATCGATCCGTCCGTTAATTGCAAAAATGTA 2052 29 100.0 34 ............................. CGCTCTAATATTTCAAGCACAGTAGCGTTAACGC 1989 29 100.0 34 ............................. TAAATACAATGGTTTATCAAAATCAATTACAGGG 1926 29 100.0 35 ............................. AATAAATGTCATGGAATCATCGTTTCCTAACGAAT 1862 29 100.0 34 ............................. AAAACTCCACAATTGCATCGTGCTGCAAGGGTGT 1799 29 100.0 37 ............................. TGGAAGATGGCGTTTAGCTTGGTTAATATGTCGAGGA 1733 29 100.0 36 ............................. ACGGGATAAACTTCTTTCCGTGTCTGATCAAACAGC 1668 29 100.0 34 ............................. CAATTCAAGAATTATCCGTTGCTTGGTCGCAATT 1605 29 100.0 36 ............................. AGATAAAAAATCAATATACATTCCAAACAGGCCTTC 1540 29 100.0 37 ............................. ACAGCAAAATTCTGTTTAGTCATACCCAAGTTGAAAC 1474 29 100.0 37 ............................. GCAGAACACTCTCAGTACATTCTCCATTCAGGAAGTC 1408 29 100.0 35 ............................. AAAAGATCTTGTTTTTCTTCCTCAGACAGCTCTTC 1344 29 100.0 36 ............................. GAATGAAAGTTGGGTGGTGCATTATGATCCGCAAGA 1279 29 100.0 37 ............................. TGAGCCTGCGGAAATGTTCGCGCACAGCCTTGCTGCG 1213 29 100.0 36 ............................. AATATAGATGAATTGACAGATGGGAAACGTACCCTT 1148 29 100.0 37 ............................. ACCTCATAGCTTGGATGGTGGAGCAGCTGCCTTACAC 1082 29 100.0 35 ............................. GAGAAACGACGGTACTCTTCAAAGGCTTTTTCTTT 1018 29 100.0 38 ............................. GTTCGCCTTGTTTGTTCAGGCGTGGGTAGTATCTACAC 951 29 100.0 37 ............................. TGTACCGAATGAGTATGCGGTAGCACATCTTTGGGTT 885 29 100.0 36 ............................. CTTCAGGGTTACGACTCGGGCTTCACCTTGGGCATA 820 29 100.0 35 ............................. ATTATCCTAGCTAGTACCTTTTTATCAGCCTCATC 756 29 100.0 36 ............................. ATAGACGTTCTCTATTGTGCTCAACTAGAGCTTTTA 691 29 100.0 37 ............................. AATCAACTGAATTACTATCCATCTTTTGGCACTCGAT 625 29 100.0 34 ............................. GGCAGAAGATGTTGGAGCTCGAGCAACGTATGCG 562 29 100.0 36 ............................. CAGAAAATACAGAGCGATACCGTATCAGGTATGAGT 497 29 100.0 34 ............................. AGCAGTCACAGACACAACAGTAGCAGTCGAACAA 434 29 100.0 36 ............................. TCGGATGTAATTGTTGACCCCACGCTTGTGGATGAC 369 29 100.0 36 ............................. AGTATAAGTACATAGATCCGCTCATTACCGGCGTGT 304 29 100.0 36 ............................. TGTCTAAGCAGTATGCTCAGGTGAAAAAACGCATAG 239 29 100.0 35 ............................. ACTTGCATATAATGCAGCTTTGACGGCCGAAGGAT 175 29 100.0 36 ............................. AGTTTTCGGTGATGCGTCCGCATATGTGTCGAAGTA 110 29 93.1 0 ..........................TG. | ========== ====== ====== ====== ============================= ====================================== ================== 72 29 99.9 36 CTTTTAATTGTACCTTATGGAATTGAAAC # Left flank : TGGAATTGAAACAAGAGGGTATTGCGATGGCTATCAGCGCAGAAACAG # Right flank : CCAGCTTCCCTTTTTTAGGACGGTGTTTAATTAGACTGCTAAATTAATAATATTATTATCAGTTTCATACTTCCTTCTGTAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATTGTACCTTATGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 1 1459-31 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAJS01000059.1 Bacteroides graminisolvens DSM 19988 = JCM 15093, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 1458 47 100.0 29 ............................................... TTTGCGTCGTAGTCTTCACTACAAACACA 1382 47 100.0 30 ............................................... TAGGCGTTACGTTAGCTCTGATTAGCTCAA 1305 47 100.0 30 ............................................... CACTTACAGACTGGCAAGAGAAACAATGAA 1228 47 100.0 29 ............................................... ACCTCGAACGGCTTATACGTATTCAGGAA 1152 47 100.0 30 ............................................... ACTTCTACCGCATGTATCAACGGCACAATA 1075 47 100.0 30 ............................................... CGATGACACATAATAAATATGCCATCCATC 998 47 100.0 29 ............................................... TCTATTGGTAAATGATACGCCAATAGTAC 922 47 100.0 30 ............................................... CGCTCATGCTTAATATGTATTCTCCATGCG 845 47 100.0 30 ............................................... AAGGTATGACGGCGGAACAAAAGAGATCAG 768 47 100.0 29 ............................................... TCCCGCCGCCCTGCAATTGGTGTTCCGTT 692 47 100.0 30 ............................................... CGTTAAACTCAACGGCCATTTCATGCGCAC 615 47 100.0 30 ............................................... TATCAGAGGTTTCTTTATTGATAGGTTGTT 538 47 100.0 30 ............................................... ATACTTCGGTAGACATATGTGTCCCTCTAT 461 47 100.0 30 ............................................... TGATGGATATCGCTTTGACTTTAATCTTGT 384 47 100.0 30 ............................................... GATCGTGAAACGAGTGGCAACGAATTGGGA 307 47 100.0 30 ............................................... TTAATGACAATATTTGTCCTATTGATGTTA 230 47 100.0 30 ............................................... GGGCACGGTATTTTGCTTGGAGGTAGATAT 153 47 100.0 29 ............................................... TGCCCAGAATGCTACATACTAATATAATG 77 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 19 47 100.0 30 GCTGTTGCTGTTAGGACAAAGATACAATTTTGAAAGCAAATCACAAC # Left flank : GCAAATCACAACCTACTCATTGCTAGGCACATATAGAAAG # Right flank : CTAACATGGATTCAATACTTTCAATCAAATC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTTGCTGTTAGGACAAAGATACAATTTTGAAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [36.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 43-628 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAJS01000012.1 Bacteroides graminisolvens DSM 19988 = JCM 15093, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================================ ============================= ================== 43 48 97.9 29 ...............................................C CGTGGGGTGCAGGAAATAAAATACAAAGC 120 48 100.0 29 ................................................ TATCGGGTAAAGTAAAGCGCTACCCAACG 197 48 100.0 29 ................................................ TCACGCTGACGGCCACGAAGCCCGGAGAA 274 48 100.0 29 ................................................ TATCCGAACCTATTCGGAATTCGACCCAC 351 48 100.0 28 ................................................ GTGTCTTACTAGAGCAGCACAACAAACG 427 48 100.0 29 ................................................ CTGGAATATCCTTAATCAACTGCACTGAA 504 48 100.0 29 ................................................ GCGTAACTTCCGTTGCTTTCTCAACTCTT 581 48 95.8 0 ..............................................AA | ========== ====== ====== ====== ================================================ ============================= ================== 8 48 99.2 29 GCTGTTGCTGTTAGGACAAAGATACAATTTTGAAAGCAAATCACAACT # Left flank : TGCAAATCACAACCATCAGCAACAAATGCAGCTAATAGTGCTG # Right flank : AGAACCCTGTAAGATAGGCGTTGTAATTTAAATACACATTCCTAATACATCACCAAAACAATCAACAATATGATTGGCACCTTGCTTTACTAACTGCTCCTTTGTGTTATAACCGTAGGTAACTCCACATGTTATGCAATTGGCGCCTTGCCCCATCGCTATATCATAAATGGTATCTCCTATGAGTAACGTTTGTTGAGGAGTTGACTGGGTTTGCTCCAGTATCATAAGAACCATGTCGGGCGCAGGTTTCTTGTTTACCACGTCTTGTTCTCCCAAAGTGTAAGAGATGTATTGGCTTATATTTAACTTATTCAATAGTAATAGTAATGCATCTCTTCCTTTACTGGACGCAACAGTAATGGTGATTCCTCTTTGATAAATGTTTTGCAATGTAGATACAACCTGCGGGAATAATTGAATGGTATCTAAGCTTATGCTATTTTTATTTCACTCTCATTGGCCTTGGAGAGCCCCAATATTTCTAATGTAGCTTGTAT # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:-0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTTGCTGTTAGGACAAAGATACAATTTTGAAAGCAAATCACAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.58%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.20,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 578-726 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAJS01000011.1 Bacteroides graminisolvens DSM 19988 = JCM 15093, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================== ============================================= ================== 578 20 100.0 45 .................... CGCAGAGGTAAAAGCATCTTTTCCAATTGATTTTTTCTTTTAATT 643 20 100.0 44 .................... ACATATCCTTTACTTGATGCTGGCATTCTGTCATTCTTTTAATT 707 20 100.0 0 .................... | ========== ====== ====== ====== ==================== ============================================= ================== 3 20 100.0 45 GTACCTTATGGAATTGAAAC # Left flank : CCTCATTATCATCCTTCTTTTCAGCATAATAGAAATACGAACGATGAATCGATATTAACCTGCATGCCCCAGTGATGCTGATTTTGTAATCCGTTACTATTTCTGCTACAACGTCTTTCTTTACCTCGGGCTCTATAGCTTTTTTTCGATGACATCCTTTAGGATCTTATTATCTAAAGCTATATCAGCATACATCTGCTTTAGGCGACGATTCTCTTCTTCAAGCTCTTTCAAGCGCTTAATATGGCTTGAATCCATGCCGCTGTACTTCGATCTCCAATTATAAAGAGTAGCACGAGATATACCATATTCACGACAGATAACATCTGTAGATAAACCACTATCAAGCTGATTGACTGCTTTTACGATTTCATGCTCACTGTGTCTTGACTTTTTCATCTTTTATTCCTCCTTGACAAATTTAATAAGATTTGTCTAATTACAAACAGTCCGACTTAAAGGGAAGCACACAAAAAAGGGAAGCTGACAGGAAGCACACA # Right flank : CAAAGCCAATAATATCAATAATCATTTTAAAAATGCATTTTCACATATCATCTTGCGTGGACGAAAAGAATTCCATATATTGCAGCAGTATTTCCCCTAAATTAGTAAGTATATGGATGATCTTAAAATCGAAATGCTTTGTACGGTTCTAGATAAGATACCTTACGGGTCCACATTCCATTTAGATGGTGTTATGATGGAGAGCCTTATACTACATTCCTTTCCTGATTTTAACTCTTTTTCCCAATTTGAATATTCTAATAAAAACAAATTATACGATACGGACCGCTTTTTCATATTAAATACTAATAGCATTTCATGGCTTAAGGAGTATATTCAATCCCACAATTTATTAGATGTTTTTATGTTTTATCGCATCTACGACAAAGATCATAAAGAGATCTTTTTACGTGTATATGATACAGATAGTTATGAAGTATCCAAAAGTTTAAATATTAAAAAAAAAAGTCATTGAAGAATGGAACTCTAAACAAGGACAG # Questionable array : NO Score: 4.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:-0.75, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACCTTATGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA //