Array 1 677071-677332 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOPH010000001.1 Roseburia sp. BX1005 DNA.677_ctg0001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 677071 37 100.0 37 ..................................... AGTTTCCATATATACCTCCTTAATAGGTGTGCTCATA 677145 37 100.0 39 ..................................... TTTTTCTCTTTAAGAGTACCATCCTTAGCACGATACTCT 677221 37 100.0 38 ..................................... CTTTTTTAACAAGTTTTAAAATTGAAGATTCTAAATAA 677296 37 91.9 0 ..............C......C.....A......... | ========== ====== ====== ====== ===================================== ======================================= ================== 4 37 98.0 38 GTAGAAATGAAGAAAGCCCGATATAGGGCATTGACAC # Left flank : ATTGCTGCAAAACTTGTAGAATTAAGAAGGCAGGAAAGAGGAGTTAAAAAAGCAATAGACAAGCAGCAGGAATCATTGAATGAATTGTTTGATACGGCAGGAGTGGATTGTCTGGAGATTGACATCGGATTGTTGATCAGAAGAAAGGTGGAAGAAGGATATGAATATAGCATAGAGATATAAATTTTTTTGGATAACGAAAATATCTGATCAGGAAAATCTCCATGCTTGTTTTGTGCAGGCGTGGAGATAAAATTTAAATCTATTGGAAGCAAGTTTGACAAAAATAGTGCATGAGGTTTGAAAGTATGATATACTGATTTTAGGTTTTGAAAAGTAAATAATGAAATTCATTTCTGCAAGAAAGAAGCTATAAGAACTCAATTTTTTCAAAAAGCCAAAAAATCAGCCGATTTTTACTGATTTTATGAAAAACACCAGATAGGTTTACAAAATTGATGCCGGCAGCCTCGTAAAATCAAGGGTTCCCAGAGGTCAGG # Right flank : CCACAACCAGCTATGATACAATCATGAGCACGTATATTAGCAAAAATGGATATAACCCCATTAGAAAATGGCACAAAAAAATATGGCTTTCATTAAAAATAATGAAAACCATACATTTACTTGTCATTAGATATTTAGAAGAAATGATATTGACAGGATTTTAGAAGAAAAGACCTGAAAGTCGTAAATAAACAGAAAATGCATCATTATTGAGGTACTACAGTATATCGACCAAAACCAAAACTTGTATTTTTACCGATATGTATGAGTTCCCCTGCTAAAAGAAGAGAAAGTGTTTCAAAATCTACATTGGAAAGCAGGAGATCACCGGTGATTCCGTGAAGTTTGATATTTTCTTTATGTCTGGAAGAATAGCGATTAACTTCTTCGGCATAGGAAGATTGTTTTATTACATTTGGAATATTATGGATCAGTTCTTTTCCGGAAATAGGTTTCCCTTCATAATAATTTAGCATTTCAATGCGACGTGCGATACTGTT # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAAATGAAGAAAGCCCGATATAGGGCATTGACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 679040-679517 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOPH010000001.1 Roseburia sp. BX1005 DNA.677_ctg0001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 679040 37 100.0 36 ..................................... CAAATTTTTCTTCTTTCTGTTCTATTTCGGGCTGTG 679113 37 100.0 36 ..................................... CTTTGAAAACTTCTCATTTATGGCTACATAATATGG 679186 37 100.0 37 ..................................... AAAGTCATCTACTTTTAACTCTTTTGAGTTTATTTCT 679260 37 100.0 36 ..................................... CTTAGATGGATAAAAGTTTTCTTTTAATCTGTCCTT 679333 37 100.0 35 ..................................... AATATGAGATGCAATCATTTTCCAATACAATTGGT 679405 37 100.0 39 ..................................... AGCCAAGAGGTCTATATAAAGACTCATAAGGTCATAATC 679481 37 89.2 0 .......C...........A.T.C............. | ========== ====== ====== ====== ===================================== ======================================= ================== 7 37 98.5 37 GTAGAAATGAAGAACGCCCGACATAGGGCATTGACAC # Left flank : ATAAGAAGGAATTGAATTACAAGTAGTAGAAGTTTATATCGTAAATATAGAATGCTAGTGATTACTGTTCAGACGCAAGCTTGACACTGCGCTGTCAAGCTATGCGCCATAGTGTTAATTATTGTGTGATTACAGCCCCTGCCTCGCAGAGGCATTTTAAATGGGCTGTAATCGTTGCTGGTCCCACTGTTAGGTGTGAACAAGTAACTGTTAGTGACAGTTTACTGGTCTATCAGGGAAGAGTGGCGAATATGAAACTATAGCTGACATATTTCAGAAAAAATAATGCAAGTAATTTTGAAGTATGGTATACTAATGAGGATATATGATTTATAACATTTCTGCATATGGGAAAGTAAGATAAAATGTATTCGATGTACTGGATTTTTTCAAAAAGCCAAAAAATCAGTCGATTTTTACCGATTTTCTGTAAAATGAAGAATAGGTTTGCAAAATTGGCTTCTACAACCCCGTAAAATCAAGGGTTTCCAGAGGTCAGG # Right flank : CGCAACTAGTGATTTATTCTCCTAACTGCCTTTGCGTTTGCAAAAAAAAGCCCGCCCAAGGGCATTGATCCACATTGCCACATTCGGCTATGTCGTAAAATCTATACAGCAAAAATATGTAATTGCCAACGCAGCAAACAAAATATGATCTAAAAAGATCCGGAGTCCATAGATAAATGGAATTCTGGATTTTTTTATGTGAAATAATATAAATGTTACATTTTGAAATAAAAAAATGATATATGTAAGAAAACTATATAAAATAACCAAAAAATTAGTAAAAAAAGAGTCGTAATATGATAAAATATAGTACAAATGAAAGTTTGTGCATTTGTTGACAGATAAGTGTACGCATACTAAGGTTATATAAAAAATACAAAAGGGAGGGTAATCAATGTCAAGATGTTTAACAATCTTAGAAGTATCTCAAAAGCAGAATTATATATTTTCTAGTAAAAAAGTGAAAAATAATATTGTGAATTCTGCGGTGATTGCATATG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAAATGAAGAACGCCCGACATAGGGCATTGACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //