Array 1 5581-6278 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADOFQ010000005.1 Pediococcus pentosaceus strain FAM 23908 FAM23908-i1-1_scf5, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      5581	    36	  97.2	    30	...........G........................	TATCGTCTGAGTGATCATCTTGTAATTTAA	
      5647	    36	  97.2	    30	...........G........................	ACCTAGAAGGCGAATTAGCAAACATTCAAG	
      5713	    36	  97.2	    30	...........G........................	GTGGTGACACACCGGTAACAAAGAAGTTCA	
      5779	    36	 100.0	    30	....................................	TGCTACATTCTATGGCCAAGATGTGTCGTT	
      5845	    36	 100.0	    30	....................................	TAAATTTCGCCATTAAGCTTCCTCCAGTTC	
      5911	    36	  97.2	    30	...........................C........	TTCTGCCGGCGGAATCCACTAAATTTGTTT	
      5977	    36	 100.0	    30	....................................	TTATTAAAAAGTGCCTTATCTCCTGTCACT	
      6043	    36	 100.0	    30	....................................	TTTGACCCAGTCGTTGCTTGAACCATCTGA	
      6109	    36	  97.2	    30	............C.......................	CGCGCGCCGTTATATCTGAATTTTCTATCA	
      6175	    36	 100.0	    30	....................................	TTAAAAACTAAAACGTCTAATGATAATCTG	
      6241	    36	  91.7	     0	...........G.................A..T...	|                             	C,A [6269,6271]
==========	======	======	======	====================================	==============================	==================
        11	    36	  98.0	    30	GTTTCAGAAGAATGTTAAATCAATAAGTTCAAGTAC	                              	       

# Left flank :   CAGAATTTAGTTTTAACAAAATATTTGCGCCAAATTGAAAAGTTATTTTTACGGTCTGTTACAGATGAACAGCAAAATAAAATTCATGATGAAATCAATCGTATATTTAACATAGTTTCCGAACAATTATTTTTACTAGATTTACCGATAGAAGTTAACTTTGATTTTGATCTTAAAAAGTTATTTAAATATTGCGGGATTCGATTTGATCCAATTTTAATTAGTAAACCATATGGTATAATTGAAACAATAATTAAAATTCATGAAACTAGTAATCTTGACTCGTGTATAGCGTTAACTAATGTAGCTCATTATTTAACGCCAGTCGAATTTGAAGAACTTAGCCAGTTAGTCAAAGAGACGAATCAAAAAATACTACTAATCGAATTCACAGAAATAGAAGAGCAGAGCTTCTATGGAAACGCTGAATTCTACTACATTGATACTGATTTTATTGATTGGCACAACTGAAACCATTATTTTTTTATGAGAAATTAATG
# Right flank :  CAAACTGTACCTCCGCAACAACTTAGCCAGCTGTTGTAATTTTCCACAACTAGTTCGACAGTCCAAAATAACAAATTAAAAAGAATCATTTTAGCCACTAATACTTAGTGAAACTAAAATGATTCTTTTTGTTATTTAATTACTAACGGTAAAATAACGACCGAATTCATTAAAATATGAGCAATCATCGAAGTTTGAATACGGCCGGTCTTTTTGTACAACCAGCAGAATAGCAAACCAATGGCCGCATATAGAAAGATGTGACTATCGTTGTGCATAAATGCAAAGGCTAGACTAGAAATGATGGCCATGACGGTGAATCCTAGTGTGGAATTAGCTCCAAACATCGCACTGAGATTACCAAATAAAACTTTTCTAAAAACCAACTCTTCCATGATTGGAGCTCCCACGGTGATCGCTAAAATGAAAAATGGATTGGTTTTAGCCAAAGTCACCAAGGTTGCGGTGTTTTGAGAAGTAGGATTACTTCCAAAAATAAT

# Questionable array : NO	 Score: 5.95
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTCAGAAGAATGTTAAATCAATAAGTTCAAGTAC
# Alternate repeat :   GTTTCAGAAGAGTGTTAAATCAATAAGTTCAAGTAC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-0.30,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [75.0-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.68,0   Confidence: HIGH] 

# Array family : NA
//