Array 1 161226-164198 **** Predicted by CRISPRDetect 2.4 *** >NZ_UCOV02000069.1 Acinetobacter baumannii strain D46, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 161226 30 96.7 30 ............................G. ACAGTGCGCTTAGGTGGCGGAAAAATCATT 161286 30 96.7 30 .............................G TCTCACGGAGAACAATTTTTTCATCAACTT 161346 30 93.3 30 ............................AG TCGGCACAGGTAGCAGTTGAGCAGTCATCG 161406 30 93.3 30 ............................GA GTTCTTTCATAACGTAGGCTTTAATGCCTG 161466 30 93.3 30 ............................AA CGTTTCCGCAAATCTGCGAAATACTCGTTG 161526 30 93.3 30 ............................AA TATAGTGGCATCTTCGAGAGTTAAAGGCGG 161586 30 96.7 30 ............................A. CAGAATTTTGTTTACAAGTTCTAAGCGGGA 161646 30 93.3 30 ............................AG TTTGAACATCTAATAATTGAGCTGTAATAC 161706 30 93.3 30 ............................GC CTCCAATTGATCCAATTGATCAACCTCCAT 161766 30 96.7 30 ............................A. ATGGTGGTTGTTATAAACCGCCTAATGATA 161826 30 96.7 30 ............................A. TAGAAGACGTGGACTCCCCCAACCTTTCAA 161886 30 100.0 30 .............................. TGCGCTCTTGCGGTTATTATCAAAGACCTC 161946 30 93.3 30 ............................AG CATGTGCTAAATCAGGGAAAAGAAAAGCCA 162006 30 96.7 30 .............................A ATTATAATCGCAATAGCTTCAATACTCCTA 162066 30 93.3 30 ............................AG TGCGTGAACATTATTCTTTCTGCATCAGCT 162126 30 93.3 30 ............................CG GTACGTTCAACGGTCAGCAGATTTGTGTTA 162186 30 96.7 30 ............................A. TAATAGTAATCGTAGTGGCGGTGTGTCAAT 162246 30 100.0 30 .............................. AACTTGCTTACGGCCAACACCTGTAATCAA 162306 30 96.7 30 .............................A CCAAACCAATCAGCAATGGAAAAACCACCG 162366 30 96.7 30 .............................A TAAAACGCGCAAAAAAATATAAGGGACGTA 162426 30 100.0 30 .............................. AAACTGATTTACAAGCTTGATCAGTAGGCC 162486 30 96.7 30 ............................A. CATGAAGCTTATTAAATGACTGACATGGCT 162546 30 93.3 30 ............................AA AGATTCTAGCCCCCTCAATTGAGAAGTTAT 162606 30 96.7 30 .............................A TTTAGAAAGCTTGGAAAATAAAGGTGACTG 162666 30 100.0 31 .............................. TGCCGATGCGTGCAAACATTTGCTCCGCTTC 162727 30 100.0 30 .............................. ATAGATGGCTTTAACTGACTCCCAGCCCAT 162787 30 96.7 30 .............................A TAAGAAAAATGCAAAAAAGGCATTTATTAG 162847 30 96.7 30 ............................A. ACACATGTTTTTCTAATAAGAATAAGACAA 162907 30 100.0 31 .............................. ACCAGATAGCAACTCTCTAGGTCAGATAGAC 162968 30 93.3 30 ............................CC AGACTTGATTTTTATCACCATTGAAGAGTT 163028 30 96.7 30 .............................C AGGTAATAAAAAACCGCCCGAAGGCGGTAT 163088 30 96.7 30 .............................C AAAACGTATGGGTTATTGATGCTCAAGATT 163148 30 96.7 30 .............................C GTTGCTACGCGCCACGGCGCACCCATCGTT 163208 30 100.0 30 .............................. GAATCGGCCGCTTTGCGTATAAACACCACC 163268 30 96.7 30 .............................A AAATCACATCAGGGAAGTGAAGGCGAGCTA 163328 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 163388 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 163448 30 93.3 30 ............................AA TAGAATTAAAACCACGTTGATAATATAGGT 163508 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 163568 30 93.3 30 ............................GA CCCATAAATCAAACAAGCCAACATAATTGA 163628 30 100.0 30 .............................. CCTCAACTGACATTTCCAAATAGTAGAGGC 163688 30 96.7 30 ............................A. AAAGCGCACAACCCATTGATTTGTATTTTT 163748 30 93.3 30 ............................AG CAAATAGATCAACTGGTGCGCCCTGTGAAT 163808 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 163868 30 96.7 31 ............................G. AAAAAAGAGCATTTCCAGCAAAAATTGACGA 163929 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 163989 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 164049 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 164109 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 164169 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 50 30 95.2 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.22, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //