Array 1 34564-33530 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCMU010000028.1 Colidextribacter sp. 210702-DFI.3.9 AJIBBLFL_28, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 34563 33 97.0 35 .............T................... TATATGCGGTTTGTTCGCTTTACCTCTACGGACTG 34495 33 97.0 33 ............C.................... ATGTCGGGCTTGATGAGCTTGGAAAGTCCCAGG 34429 33 100.0 33 ................................. ATCGTGGCAAAAACGACAACCAGCGTCAGGGCG 34363 32 90.9 34 ..........G..T.....-............. CTGATGGGCACCCTTCGCGGCTGCTGATGGAGGT 34297 33 93.9 33 ..........G..T................... GCGGCTGACCGCCGGACTGCTGGTGTCATCCTT 34231 33 97.0 34 ............C.................... GATAAGACGGATAATATCATCTGTTTTGTCCCTA 34164 33 97.0 35 ............C.................... GGGTGCTGCGTAAAGTGGTTAAGGTATATCGCAAG 34096 33 97.0 34 ............C.................... CATTGTTGGCGGAAGTCTGATGATAAACTGTTTC 34029 33 100.0 34 ................................. GTCGACTGGGCACGGGAGCACCGGCCAGAGCTGC 33962 33 100.0 33 ................................. GCATGATAGGCGTTTAGAGAAGAAGACCAGACA 33896 33 100.0 34 ................................. GGCCCCACCCAAACCCTGGCGCATCGGGAGGGCG 33829 33 97.0 34 ..........G...................... TGCAGCAGAAACATATCATCGGCGAGATCACGGA 33762 33 97.0 33 ..........G...................... CTGACGACGCATGGTACGCGACCGCTGTCAAGA 33696 33 100.0 33 ................................. AGCTTGGATATCAGCTATATTGGGCTTGCCTTA 33630 33 93.9 35 ..........G..T................... TGGCGTACTTCACCAGCTTGCGGCACAGCTTGGCG 33562 33 97.0 0 ............C.................... | ========== ====== ====== ====== ================================= =================================== ================== 16 33 97.2 34 GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT # Left flank : AGGAGAACTACCGCACGGTGGAAGGGGACATTCTGCACCAGCGGGCCCACGACGAGGACCTGCGGGAGAGCCGGGGGGACCTGCTGGCGGTGCGGGGGGTACGGGTGTTTTCCCGTACCCTGGGGGTGTCCGGGGCCTGCGACGTGCTGGAGTATCACCGGGGGGAGACGGGCATCCCGCTCCCCGGAAAAGAGGGCCTGTGGCAGCCCTTCCCGGTGGAGTATAAGCGGGGCAGTCCTAAGGAGGATACCGCCGACGCCCTGCAGCTGTGCGGCCAGGCCATGTGTCTGGAGGAGATGCTGTGCTGTGCCATCCCCCGGGGAGCCCTGTACTACGGCCAGACCCGCCGCCGTGTGACGGTAGAGCTGACAGAGGCCCTGCGGCAGGAGGTGCGGACGATGACGGCGGAGATGCACCGGCTCTATGACCGGGGCTATACCCCAAAAGTCAAGCCGACAAAGGGCTGCCACTTGGATGCAATGAGGAAGAATTCTCCGACC # Right flank : CGCATACGGGCCGTGATCTGGTCTTTATACTTGCGTCACCCCCACCCGGGGACGTGGATCGAATTACCGGGCGGGCCGCTGAGGACAGCGGCCCCTACAGGTCGTCCCCGTACGGGGCGAGGATTGAAATATGCAGGCGATTGATCTGGAAGCCAACTTAGAAGGCAGCGTTAAGGCCGTTCTCTTTCCGGGAACGGCCTTTGCTGTTTTTGGTCAAGATAGGCCAAATCGGGAAAAATCCTTGCAAATCACAGCGGTTTTCTCTATAATGGAAAATCGTGTGTGTCCCTAGAAAAATAAGAGGAGAGAGAACCGTGAGTGAACTGAAACCTCAGCTGCTGCTGTCGCTGAGAAACTATTCCAAAGAAGCGTTCGTCAAAGACCTGATATCCGGCATCATCGTGGCGATCATTGCCCTGCCCCTGTCCATCGCCCTGGCCCTGGCCTCCGGCGTGTCCCCGGAGCAGGGACTGTACACCGCCATCGTGGCCGGATTTTTG # Questionable array : NO Score: 8.59 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT # Alternate repeat : GTCGCCCCCCACCCGGGGGGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCTCCACACGGAGGGCGTGGATAGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.80,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,10.01 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 41173-41007 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCMU010000012.1 Colidextribacter sp. 210702-DFI.3.9 AJIBBLFL_12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 41172 32 100.0 35 ................................ ACGTGCTTAATTACTATCCGCCCTGCAGCAGCCGC 41105 32 100.0 35 ................................ ACAATGTACCGATAATAGGCGGCGGCCTTGTCCTG 41038 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 3 32 100.0 36 GCTGCAAGCAGCATATGTACGCTGGTTGAAGG # Left flank : ATTCAAATGGAGGACCTTTCCGGCATTAAGGAGGCGAATGATTTTCCCCTGCGTTTGCAGCACTGGACCTATTACGACCTGCAAACTAAAATTAAAAATAAGGCAAACGAGTATGGTATCGAGGTCCGTCAAGTCGATCCACAGTTTACGTCCCAGCGCTGTTCTAAATGCGGCTGTATCCAAAAGGAAAACCGGCCAGCCCAGGCAAAGTTCTGCTGCATCAAGTGTGGCTACAGGACCAATGCAGACTATAATGCTTCCCAAAATTTGGCGCTGCCGGATATTGACCGTATCATTCAAGAGGAACTGAAACAAATCGGTGCGAACCGCAAGTGAACGACAATTCACCCCTCGGTCCGCACCGTATGCCGGGCGACTTCCCGTCCGTAATTCGAGATAGTGGCAGTAAGCGCCTCCGCAGGGGGCTGTGCAATACACTCGAAAAGGTTAAGATGTACACATAGTAATCCGTGTACGACCAGCATTCTGTGCTTTTTGCC # Right flank : GCCTCACGCTAGGCCCGCTGAGCCTCCTCGCAATGACAGAACTTAGGCTCTCCGCCGTTTTTCAGGAACGGCGGAGAGCCTTTTACATAAATTCCCGAAAAACGACCTGTTTTCCTTGACGGGGCGGGGCGGAACATGGTACAAAAGAGGTAAGACATAAAACGGACAACAGGGGAGAGAAAAAATACATGGAACCTGTGGAACTTGCACAAGAGCCGAAAGCGAACCTGCGCCATGGCCGGACTGCCCTCCGTCTGCTGACCTTCCCGGCTTTGCTGCTTTATTTGGAAGGGGCCCTGCGGCTGTACATGGGGATGCGCCTGGATTATCTGCCGGTCATTCTGCCCTTTGCCCTGTCCGCCGGATTCCTGCTGGCCGGGCTGACGGCGGTCTTGCCCCGGCGGGGGAACGGGATCTTGTTCCGGCTGCTGGTTTTGCTGCTGTGCCTGGTCTATGCCGGGGAGCTGCTGGCCAAGCGGATCCTGCAGACCTATTACCCC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGCAAGCAGCATATGTACGCTGGTTGAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.80,-5.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //