Array 1 747577-748282 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384307.1 Paenibacillus taiwanensis DSM 18679 H509DRAFT_scaffold00002.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 747577 32 100.0 34 ................................ GCAACATAGAACGCTAAAGGGATTGCTACAGCAA 747643 32 100.0 35 ................................ TATCTTCTAGGGGTAAACGAGGTCTTGGTATATGA 747710 32 100.0 34 ................................ AGCGCTCTGGTATGCACCTTTTCAGATGCTCCAA 747776 32 100.0 34 ................................ ATTTGCTACTTTTGACTTAAGGAGTGGAGTGAAT 747842 32 100.0 35 ................................ GTTCATTGCGACCAATAGATATGGGCATCCACGTA 747909 32 100.0 37 ................................ CTCGCAATTATATAATTTATTTATTTCGTGCTCGCAA 747978 32 100.0 33 ................................ AACATGTCAGCAAGTTCTTTGTCAGTAGCAATA 748043 32 100.0 37 ................................ ACTGACGATCCACTACGTGGTCGATATCTACAATCAT 748112 32 100.0 36 ................................ CTCAAACTGTGTAAGTTCTTCCCAACGTATAACGTC 748180 32 100.0 39 ................................ TGATTGGCAGACCTACAAAGGACCCTGAATTACGCTACA 748251 32 96.9 0 ......................A......... | ========== ====== ====== ====== ================================ ======================================= ================== 11 32 99.7 36 GTCGCACTCTACACGAGTGCGTGGATAGAAAC # Left flank : CCCTCCTTTTTTATGGAAGTAGGTGGTATAATTGTTAGTGCTCATTACTTATGATGTTAAGACCACCAGCAGTGCGGGACAGCGACGCTTACGTAAGGTCTCTAAAATGTGCCAAAACTACGGTCATCGTGTCCAAAATTCGGTCTTTGAATGTAATGTGGATGCTGCTCAATTGGTTAGTTTGAAGTTACAGCTGCTAGAAATGATTGATCCGAAGGAAGATAGTCTTCGTTTTTATCAATTAGGCAACCATTATAAAAATAAGGTTGAGCATGTTGGGGTGAAGCCATCGATAGATATGGATGCGCCGTTAATTTTGTAGTGCGGATGTGAGGTGCACATGAAATCCCCGGGGGACCCGCACCAATTATTTTCTTTATTATTCCATATTTTATAATTTTTTATTGTTGGTATTTGATAGTTTTGATTGAAAATTACTTTTTATTGAGTTATTTGATCAATATAAGCGCGTGCTTAGCCACTTTTGGTCAAATTTCGCT # Right flank : CAACCAGTCAGGTATAAGTGTTGCATCTTGGATATGTAGTCGTACTCTATACGGCCACAATTTTGCTTGACCAAGTCATTCCTAGTCTTACGTTTGGAGATTACCCGTCGTCAAGGAATTAAAGTGGAGGTGCACGTTTTGAAAGTACTAAAGTGTATCCATGTGATGATTATTTCAACTCTTGTTTTATGCGCAGCTACTGTTGCCTATGCATCGAATGCAGAAACAGTAGTTTTGAAGAAAGCTCCAGTTCACTTACAAATTAATGAATATAATGTTCTCTTCACAGATCCCAAACCACCGTATGTTGACAACAATAACCGTTTGATGATTCCTCTAAGAGCCATAAGTGAACTGCTTGGAGCAAAAGTGTCATATTCAAGCACAGACAAAAAAGCGTCAATTCAGATGGGAGAAAATAAACTATCAATTACCGCTGGAGCAAAAGAAATAAATATTAATGGGCCCACTAAACGAATGGACACTGTTCCTGTTGTCTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACACGAGTGCGTGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 608786-609221 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384306.1 Paenibacillus taiwanensis DSM 18679 H509DRAFT_scaffold00001.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 608786 32 100.0 33 ................................ TGAGCTGAAGCATGCATCAAACAGTTATCGAGA 608851 32 100.0 37 ................................ TGGAGCTGACTGGGATAATCCCACCGGATTTAACAGG 608920 32 100.0 34 ................................ ATTTCGTCCTCCTATATAGTTATACAGAAGTTAG 608986 32 100.0 37 ................................ TTTATCTTCAATATCAAAGTACGCTATAACATCGTAA 609055 32 100.0 34 ................................ CCCATATGCTGCCTTCCTCTGGATACAAGGTTCG 609121 32 100.0 37 ................................ GTGTTCCTGATTGTAAGTTGAGCAGATGCAATGTCCT 609190 32 81.2 0 ...........C.....C..A..A..T.C... | ========== ====== ====== ====== ================================ ===================================== ================== 7 32 97.3 36 GTCGCACTCTATACGAGTGCGTGGATAGAAAC # Left flank : AGGAGTTGAGCGGGCAAGAGGCGCTGGCTCTATTTCAAACCTGAAACGGATAGTTATGTACTTGGCGTAGCCCATATTTATCGATTGTAAATCAACGCTTTATGGCGCGGTTATTTATCCTCACATGTAATGGACCATTTGATATGTTGTCATTATAGGTGGGGATTTCTTTTTGTTTTGTGTGGAGTGATCTGTATTTTGCGTTTGTGAGATTTGTTCGAGCGCTGTTATGGGGACGTAGAGGAAAATAAGTCTTGTACTTGTCACATTGCATTCCATAGGCGATACTAAACATAAGTGGTTAGGTTAATGTTGCTTGATAGGAGGGTTTGGTGCGAACCCCAGGTGCACATGAAATCCCCGGGAGATCCGCACCTCTTGCTGCACAAGGGATTCCGGCATTTTGTCAGTTGATTGTCAGTGAAGTTTGCCCTGTATTTTGGAGACCCGCACTTTTGGGGCTGGGAGCCCTAGTGGGACAAGGGCTTTTTGTACCCGCA # Right flank : CTTCAAATGGCTACTGCAAGCAACAATGATGGATCACATCTTATCAACACGAATTCCCTTTTAAAAGAATCAAATTAACCCTGTTAGCCACAAACATAGGTCGTATCCTTTAACGGAACCGGCCTATTTTGCTTTGGAAATGTCTGTCTGCGAGCGGAAAATGATAAACAAATCCTAAATAGAATCAAGATGATGCTTTTGCAAATTGGGAATTAATGATCTATTTTGTCGTTACATTTAAATTTAACTTTAATGGATTAATTTTGATTAAATAGAAATATTCATATGTTATTTGAATACATGATCTGATATGATAGGTATAGTGAATAGTTCAAAAGACTTACATTCTAGTACGTTCATTGCCTTATTTTTTCGATTCAGGTCGATTAATGACTGATCCAATAATGTCCATGAAGAGGTGAAACTAATGTCAGAGCAACAATCAGCTCCTATTATTCGCCTGACAGAGGTACAGGCTAGAATCGGTAAGATTCAACAGT # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATACGAGTGCGTGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.70,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 617729-618438 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384306.1 Paenibacillus taiwanensis DSM 18679 H509DRAFT_scaffold00001.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 617729 32 100.0 36 ................................ CTTAGCGGATACTCGTAAACTAGAGGGTAAATCAAG 617797 32 100.0 39 ................................ TTTCGATCCCACATATCCATGAATTGATCTATTTTTTTG 617868 32 100.0 34 ................................ ATCCTCTTTTGTTGCGTCTCTAACATACTTGGCA 617934 32 100.0 37 ................................ TTTGTGGACTCCAGAGAACGTATCAATGACGTTTGGG 618003 32 100.0 35 ................................ GGTATCAAAAATACATATAGCCCCGCATTAGTCGT 618070 32 100.0 39 ................................ ATATTACAACACATAGGGCGAACACAACGAATGAGGTAG 618141 32 100.0 34 ................................ TACTAACGTTTCAGCACCCATGACTCCGTATTTC 618207 32 100.0 35 ................................ TCCATAATTCGGCGCTGATTCCCGATGTATTCCGT 618274 32 100.0 34 ................................ TTTACGAGCAGCACCCGCTCCAAAAGTCATGACA 618340 32 96.9 35 ...........................T.... ACGGCCAAAACGTTCCAAATACTTTTTAGAAGGGA 618407 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 11 32 99.7 36 GTCGCACTCTATACGAGTGCGTGGATAGAAAC # Left flank : TTATTCACCCTAAAGGGGAACAACTGCGAATCGTATTACCTAATGAAGCTGAAAGCTTGGATTGGTGGTATGAGCAATTAAATCATTACGGGGCAGCACATAAAGGGATATCCATTAAAAAGGCTGACGAAGCATTAACAAAGGTCAAACTATCTGATTATCGTGTTGCTGTACCAGAGGATTGTCACAGTGAGGTGTCTCTTTTATCCTTAACGTTTCAACTTAACCAACTACTTATGTTGATAAACAATCCGATCTTGTTCCCGCATTTGGCTTATGTGGGTTTGTTTCAGGGAGCCATTAAGGAGTAGAGACGAGGTGGGGAGATGATGGTGCGGACCCCAGGTGCACATGAAATCACTGGGGGACCCGCACCTCTTGCTGCATAAGGGATTTCGGCATTTTGTCAGTTGATTGTCAGTGAAGTTTGCGTTATATTTTGGAGACTCGCACTTTTGGGGCTGGGAGCCCTAGTGGGACAAGGGCTTTTTGTACCCGCA # Right flank : CAACAGTTGCAGAAGCTGCTTTAACTTCTGCCCACGCCGTCGCACTCTATACGAGTGGATGTCCAATTAAAGTATAAGTACGGGAATCGGAAATTTTGGGTAGAAGGATATTACGTGAGTACAGTGGGTTTGAATGAAGCAACTGTAGCAAAGTACATTCGAGAGCAAGAAGCACATGATCAAGCAATAGATAAGCTGAGTGTAAAAGAGTATGAGGATCCATTCAGTGGTAAAAGTAGCAAAAAGAAATAAACCAGTTTAACTGGTAAGTGGAAGTGACAAATAACACTGAGCCTGAACAGATTTGCTGTCAGGCTAGCGTCTTTAGGCGCAGTTTGGCAACAGGGGGGTATACCCCAAGTGCAAACCACCCGTTTGACGTGTGGTTCTGATTTTTGTCTCGTTAAAATTTATTTTCGAGGTTTTGTAGAAACACATGCTACACTAGCCGCGAGGAGCGGCACAAGGGATAGAAAAAAAGGCGGGCGATTAGGGGGAGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATACGAGTGCGTGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.70,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 127068-126489 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384308.1 Paenibacillus taiwanensis DSM 18679 H509DRAFT_scaffold00003.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================== ================== 127067 32 100.0 34 ................................ ATCAAATTCATTGTCGAGATCGTACACCTTATTA 127001 32 100.0 38 ................................ ATTTGCAGCTGCGTCTCGTTTATTACTCGTCTCCTTAA 126931 32 100.0 35 ................................ TGGCATATCCTCATACCTTTTCGAAGAAGGATCAC 126864 32 100.0 36 ................................ TCGCTGTATCCTGCCCTGATTGCCGCCTGTGTGGCA 126796 32 100.0 33 ................................ TTTGCCACATCCTCGCGCTCAGCAATGTGATAC 126731 32 100.0 37 ................................ ATGTATTCGTCTTCCCAATCCTGATTTTCGAGTTTTA 126662 32 100.0 40 ................................ GGCAGCTAAGGAATTTGGTCTAACCGAAATTGGGTGTCAT 126590 32 100.0 38 ................................ TACGATGTCACTTAGAACAGATGAGATCGGACTTTATG 126520 32 87.5 0 ............T...........TC.....T | ========== ====== ====== ====== ================================ ======================================== ================== 9 32 98.6 36 GTCGCACTCTATACGAGTGCGTGGATAGAAAC # Left flank : GTACGAATAGTCCTTATAAGCAAATCATCATCTCTATGGGATCTGGTGCTACAGCAGCTTTGGGTGCGTTTGACTATCTAATCCGCAATTAATAACGTTATCTATATCAATTGTACAAAAGCCCTCACTTTAACAAGTGAGGGCTTTTGTGTGCAGCCTCAGAATAGGGCTATTTTGAAGTGATCTCTAGTCTGTACATACCTTATTAACGTATCCGCTATGGATATGTTATTGGTTCTTAAATAAATATAAGCGCTCCACTTGCCACTTGGTAATCTATAAGCGATACTAAACATAACGGTATAGACTCGTTTAGGTTAAAAGATTCTCTGGTGCGGACCTCAGGTGCACATGAAATCCCTAGGAGATCCGCACCTCTTGCTGCATAAGGGATTTCGGCTTTTTGTCAGTTGATTGTCAGTGAAGTTTGCCTTATGTTTTGGAGACCCGCACTTTTGGGGCTGGGAGCCTTAGTGGGACAAGGGCTCTTTGTACCCGCA # Right flank : ATAAAAGTAATTTAACCCGTGTTCTGTTGACCAAGTTATACCCTAGACGGTTCTTAAAAGGATCACAGTGTGGCTTATCGTTTTGTGGTTCGGAACAAACTATAGGAGATATGTAACACGGAGGGGGAGGCTGTTAGCAGCTTTAACAGCCATATTTAATCAGGTTAACATGTTACAAGCAAGTCAGCCTGCCGGTGAGTGGTTGCCAACTTGTACATCTGGGGAGGTGACATCACCCACCGGCTGACTGTTGTCTAAGCGTATTTTCCATAAAGGGTCATGAAAGTTCCATTACATTATGCGTGTAGCTTGGATGACGTTGTTGGAGTGTGGTGTTTAAGGGAGATTATTAAAGTTCATCGTTGTATATAAATACGTTTGGTTGGACACATCGTAAACGATTTTGTCTACATCTGCTTGTGAATACTGGGAATCATCACAGTTTTTCGTATGGCTCCATGAGAAGCTGTTTAACGCCAATGTTCCACCCGCTTTTTTGA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATACGAGTGCGTGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //