Array 1 6137-1729 **** Predicted by CRISPRDetect 2.4 *** >NZ_JUET01000062.1 Tannerella forsythia strain ATCC 43037 contig062, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 6136 30 100.0 39 .............................. TCTTTTAAAGTATCTAAAAACTTATAATTAAAATTTGCA 6067 30 100.0 35 .............................. CCCATTCCTGCATACGTTCTTCTACGTATGATTTT 6002 30 100.0 36 .............................. TGATAATAAACTCTACACAAGAAAGAATAAAATAAA 5936 30 100.0 35 .............................. CCCATTCCTGCATACGTTCTTCTACGTATGATTTT 5871 30 100.0 38 .............................. ACTTCTGTCATATAAAACGAGAAAATTCTATAATCAGA 5803 30 100.0 36 .............................. TATTCGTAAATAGCAGCCCTAAGACGACCTTCCAAC 5737 30 100.0 35 .............................. CTGTTAAAACACAGAAAGGATAAAAGTAACGTGTA 5672 30 100.0 37 .............................. GTTGTACGTCCTGTATTTCCGAGAAAACCAATAATTT 5605 30 100.0 38 .............................. CTTTTATCGCACCATTCTTAAACGAGCCTCCTTCAAAC 5537 30 100.0 35 .............................. ATGAGTTTATTGAAACCTTTCTCGAAGAGGAGGGT 5472 30 100.0 37 .............................. TTAAAAAATGAGCCTTGCGCACTTCCCCGAAGGCGCG 5405 30 100.0 36 .............................. CAATTCGTCTACGCATAGTAAAGCATAGTCTGATTG 5339 30 100.0 38 .............................. GCCACCACCGCCCTTGCGTGGGCGGTTTGGTGTGCGCA 5271 30 100.0 34 .............................. GGGCGTAGGGATTTATACGTCCCTGGAATATTAT 5207 30 100.0 36 .............................. CATTTTTCGCGAAGCATGCTGTTTACTGTATTTATA 5141 30 100.0 37 .............................. TAAGGGGCAGGCTTCACCCCCGTGAAGGGTTCGGATG 5074 30 100.0 38 .............................. GGACGTAAGGATTTATACGTCCCTGGAGTGTTAGTACG 5006 30 100.0 35 .............................. TCCTTCAAGGGGCATGGAGGTGAGCGCAACGGAAG 4941 30 100.0 36 .............................. CAGTTTTTTTTGCGCTGTTGTCTCGCACATACGCGT 4875 30 100.0 34 .............................. TCACCATGGGTATATCTAATTAATTGTCTCGCTG 4811 30 100.0 40 .............................. CCTCGGCATCCGCGTACTCTTTACGGTTTGTGATGTCGCA 4741 30 100.0 35 .............................. AATATATTTCCGCTTGAATGCCATATGACACGGAT 4676 30 100.0 36 .............................. ATATTTTTTTAAAAAAAACATGCACGGGAAAAACTA 4610 30 100.0 36 .............................. ACGACAGGGGAGGGAGATACGAGACGGAGGACTATA 4544 30 100.0 36 .............................. ACATTAGAATGCAACAAGGAATTAATGAAAAGAAGC 4478 30 100.0 38 .............................. GAAATTGAATTGATTCATTTTGAGCTTTCCTTTTTGAA 4410 30 100.0 37 .............................. TGCACAGGGGAGGGAAAATGAAACAAACTAAAAAAGC 4343 30 100.0 38 .............................. TCTAAACCGTACCATCGTGGCTGTCCACCGCGGTGGAC 4275 30 100.0 37 .............................. ATTCGGACGTTTCAGACACGCGGGCTACACCCGCGCT 4208 30 100.0 35 .............................. GCTTGATCGGTTTTTCGGTATGGGGGGGCTGCATT 4143 30 100.0 34 .............................. CCACGAAAGCGGTTTTATACTTTTCCATATCCGG 4079 30 100.0 36 .............................. CAAAAAAAGGGGGAACGCTTTCGCGAACCCCCTGAA 4013 30 100.0 36 .............................. CTCTCAGTTCGACGGTTCGGCCAGCGACGGGGGAGG 3947 30 100.0 34 .............................. GCTAAAAAAGCGCGCTGCTGCTTTTGAATCGGAC 3883 30 100.0 36 .............................. CATCTTTATGTAGTGTTCGAGGGTGGGAGTCATTGC 3817 30 100.0 38 .............................. TTCGTGAAAGTTGTTGCATGGTTACGCAGTTTTTTACG 3749 30 100.0 35 .............................. GCGTTGGCGGTGCAAGTGTTAACGTACGCCAACCG 3684 30 100.0 37 .............................. GAACGTGGTGCGGAATACGGGTATTTCCCCATACGGG 3617 30 100.0 34 .............................. CCACCTGCCCCGCGTTGGGGCTTTGTTGTGCGCA 3553 30 100.0 36 .............................. TCTCTCGTGTAATTGTAACACACTACGGAATCATAC 3487 30 100.0 35 .............................. TCCGGACGAGGAGGACGATGACAACGAACCCGACC 3422 30 100.0 37 .............................. ACCCGAACCTTTTCCCAGAACCTCGCCAGTTAGAGCA 3355 30 100.0 37 .............................. TCATGTGCGACAGAATAAGGCCGAGCTTCTGATGATT 3288 30 100.0 38 .............................. TGTTCTCGAATTGGTATTTATCAACAAACAAATTCAAC 3220 30 100.0 35 .............................. ATCTTTATAGAAAAGATGTTATGCTCCGACAAACA 3155 30 100.0 36 .............................. TTACGGGTATAGACCACCATTCTATTATTAACGCAA 3089 30 100.0 37 .............................. ATTTTCTACATCCTTTACGCCTGAGCACACCAAAAAC 3022 30 100.0 35 .............................. CATAAACGGCCGCGAGGTTGCCTTTGTTCTGCTTT 2957 30 100.0 37 .............................. CACCCAATCTACGAGAATGTTTGCGACCGATTGGCAC 2890 30 100.0 37 .............................. TGTATTTGCCGCTGCGCCGTCCCCCTTGTTATTCCGA 2823 30 100.0 36 .............................. GCGATTGCGGCTACAGTCGCAGGAAGGGTAAGGACA 2757 30 100.0 36 .............................. TCCCACCCCTCCGGCCCGGTCGTTTTTTCTGTATGG 2691 30 100.0 36 .............................. TGCGGATGTTGATGATATCCCAGTTTCCGAGCGGTT 2625 30 100.0 39 .............................. GTGGGCGCAGTGATCACGGCTATCTCCGTCGCACTGCAG 2556 30 100.0 37 .............................. CACCCAATCTACGAGAATGTTTGCGACCGATTGGCAC 2489 30 100.0 37 .............................. TGTATTTGCCGCTGCGCCGTCCCCCTTGTTATTCCGA 2422 30 100.0 36 .............................. GCGATTGCGGCTACAGTCGCAGGAAGGGTAAGGACA 2356 30 100.0 36 .............................. TCCCACCCCTCCGGCCCGGTCGTTTTTTCTGTATGG 2290 30 100.0 36 .............................. TGCGGATGTTGATGATATCCCAGTTTCCGAGCGGTT 2224 30 100.0 39 .............................. GTGGGCGCAGTGATCACGGCTATCTCCGTCGCACTGCAG 2155 30 100.0 37 .............................. CACCCAATCTACGAGAATGTTTGCGACCGATTGGCAC 2088 30 100.0 37 .............................. TGTATTTGCCGCTGCGCCGTCCCCCTTGTTATTCCGA 2021 30 100.0 36 .............................. GCGATTGCGGCTACAGTCGCAGGAAGGGTAAGGACA 1955 30 100.0 36 .............................. GCGATTGCGGCTACAGTCGCAGGAAGGGTAAGGACA 1889 30 100.0 35 .............................. TCGCGAAACGTACAAGTATAGCACGTCCGTGTACG 1824 30 100.0 36 .............................. CGTTGTAGAAATCGTCTTCGTTGATAACAAGTGTTA 1758 30 93.3 0 .........T...................T | ========== ====== ====== ====== ============================== ======================================== ================== 67 30 99.9 36 CTTTTAATCGGACTATCATAGAATTGAAAC # Left flank : TAAACCGTTTAAAATGTACTGGTAATGTATGTGATTCTGGTCTATGACTGCGGCGAGAAACGGGTTGGGAAAATGCTCAAGCTCTGTCGGAAATATCTGAATTGGATACAAAATTCGGTTTTTGAAGGCGAAATTACAGAAGTTAAATTAAAAGAGTTAACTTTGAAGGCTGAGAAAATAATGAACAGCGATGAAGACTCTCTGATTGTTTTTTCAAGTCGACAAGAAAAATGGTTGGATAAGCAAATCTTTGGTAAAGAGCGGAGTAGTATCGATAACTTCTTGTAATAAGTTGTCGGTGAGTATGAATTTCCATAATAGAAATCGAGGCATCGCTATTATGCGTTCTTTGACACATTGAAAATCAAAAGATAAAATTAGTTGTCGAAGTGCGGGGTTTTTCTTACCTTTGTGCTTCGACAACTTTGTTTGTTAATTTGTTGATATAATTGAAGGATAGATTATTGAGAATCAGTAATGTTTTTTGTCGTTTCGAACGG # Right flank : TGTCGTTTCAACTACTGAATGCAACTTTATGTTTCAAATTTAAGAAAAAGATTTCTTCTGGAGAATAGAAATTGAGTTTGTATTTTGGTCTTTCGTTGATTCTGTATTGCATCTGTTTGGTTATATTGTTACTAAATTCATTGCAATTTGATTTTTTAGGGATGTACTGCCTGATCAGTTTGTTTGTATTCTCAATCAATCCTTTTTCCCATGAAGAATAGGGATGAGTGAAATATATCTGTGTATGTAACTTCTTGGCTAATGATTAATGATCTGCAAACTCGCTACCATTATTTACGGTGATGGAGTGTATATGCTCTTTTTGTATGGCAGCAGTATATCGTAAACGATTTTTGAATGCTCTTTTGCATTTTTCCCTTTGGGCAGTTTTTGCATCATGCAAAAAAACATAGTTCTTTCCACTAAGGTCAGGATATCCCCTTTGCCGTTTTTTCCGACAATAGTGTCCATCTCCCAATTTCCAAAGCGTTGTTTGAGAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATCGGACTATCATAGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //