Array 1 99481-103359 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIXI01000008.1 Aquabacterium lacunae strain KMB7 NODE_8_length_140737_cov_103, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 99481 29 100.0 33 ............................. CCGTGCAGGTGCCCGGTGACAGCCGGTTCCACT 99543 29 100.0 32 ............................. CATTTCCTCGATGTACCCCGATGCTGGCCGCA 99604 29 100.0 32 ............................. AGGCGTCATGGACACGATGTCCTCTGATGTGA 99665 29 100.0 33 ............................. ACCACACGCGAGTGCTACGAGGTGCGCGAAGAC 99727 29 100.0 32 ............................. CGTGGGTTGTCGGTCAGCTCGGTCTTGACAGC 99788 29 100.0 32 ............................. TGCATTTATATGTACTGCCCAGGGTGCGGACT 99849 29 100.0 32 ............................. CCCCCCTCAGTCCCTCAAAACCAGACTTATTA 99910 29 100.0 33 ............................. GTGTCGGGCTGGATCATGCACAAGGAACTGACC 99972 29 100.0 32 ............................. GGCGATGTGATCGCGGCCGCGCAGGTGACGTT 100033 29 100.0 32 ............................. GTGATCAGGTGGAAGCCTGAGTGCGAGAAGAA 100094 29 100.0 32 ............................. ACCATGGAATTCACATGGCGCGGGCGGCCTGT 100155 29 100.0 32 ............................. CACACCAACCTGGAAAGCGTCCGCATCCGCCG 100216 29 100.0 32 ............................. GGTGCCATTCCCCCCGTGATCGTGAGCGTGAA 100277 29 100.0 32 ............................. CGGACCTGCCGCCCCCGAGACATTCTCATCAG 100338 29 100.0 32 ............................. TGGTGGTGTGGGCTGTTGGTCGTGGCGAGGAA 100399 29 100.0 32 ............................. TTCAACAACCGGGCGCGGTTCATGGGCATGCC 100460 29 100.0 32 ............................. ATCGGGGCCGGTCTGGCTTTCCTCCATCTCAT 100521 29 100.0 32 ............................. TTCCCCGAGCCGGAGCCGGTGACGCCGACGCG 100582 29 100.0 32 ............................. GCCGTGACGGGGCCCCGCATTCAGTTTCTCAA 100643 29 100.0 32 ............................. AGTTCCGCTTCTTTGGCAAGACCTACCTGCCG 100704 29 100.0 32 ............................. ACGCCCGCGCCGCTGCAAACGAGCGCGCTTTT 100765 29 100.0 32 ............................. TCGCTTGGCGAGCTGGTGGCCGTGTTCCAACG 100826 29 100.0 32 ............................. GGTCTTGAGGGCGGTCCACAGGTTTTCCACGT 100887 29 100.0 32 ............................. TTCTCCACCACCAGCTCGTGCGGGTGCTGGCA 100948 29 100.0 32 ............................. TCAGCCGGGCCGCCCGCAGTGTTGCTGGTGGT 101009 29 100.0 32 ............................. CGGGCAAGCCGGTGCCCGTGGCCATCCCGGGC 101070 29 100.0 32 ............................. GCCTTGTAGCCGTCAGACTGCTCTTTGAAAAA 101131 29 100.0 32 ............................. GTCACGCCCTGCGAGAAGTGCCGGGGGTTTGA 101192 29 100.0 32 ............................. TCGGCCGGCAAGCTGGTGACCAAGGAATCCAT 101253 29 100.0 32 ............................. CGTTTTGCGGAGCCGCTGAGTGCGGCGTGTGC 101314 29 100.0 32 ............................. AGCCGCGCGAGCTGACCGAAGAGTGCGCCGAA 101375 29 100.0 32 ............................. CAGTGCGGCAAGGTGCTGAGGCACTTGCTTGA 101436 29 100.0 32 ............................. TACGTGAGCCCGCCGACGTCGCAGCTGCAGAC 101497 29 100.0 32 ............................. GTTTGACCACGGCCGACGACCTCAAGCAGCAG 101558 29 100.0 33 ............................. TGGGCGCGGCCATCGGTGATTTCGTGTTCAACC 101620 29 100.0 32 ............................. GAGCACCACGGCGACGACCTGGTGCAAGCGAT 101681 29 100.0 32 ............................. ACCCCGCACACCCTGGACAACGCCACCCGCGT 101742 29 100.0 32 ............................. CGATGAACACATGTTTGCCCGCGATGCCTTCA 101803 29 100.0 32 ............................. GCCCGCGAGATGCTGGCCGGTGACGCCTTCGC 101864 29 100.0 33 ............................. GATGGCGAGGCTTACCTGGGCTACCTGCGCGAG 101926 29 100.0 32 ............................. GCCTGCAGTTTCCACTGCTCGCCTGCCAGCCA 101987 29 100.0 32 ............................. GCAGGCAACTATTTGCCGCAGGGCGCCAGTCA 102048 29 100.0 32 ............................. CAGATGCGCGCGGCGCGGACGTTGTGGGCGGC 102109 29 100.0 33 ............................. GCGTCCTTGTATTGCTTCAGCACCCCGTCGATC 102171 29 100.0 32 ............................. GAGGATCGGTTCGGTCCCAGCCTGTCTCCCAA 102232 29 100.0 32 ............................. GCTTGCACCTTGATGTCGTTGGCCGTGATGAT 102293 29 100.0 32 ............................. GTGTCGAGCGGGCTGCGGTCCTCGCTGGTGTC 102354 29 100.0 32 ............................. TCCCCCGGCGTTTGATGATTGGCGGCATTCCT 102415 29 100.0 32 ............................. TAGCGGCGCTCAGCGAACCGGCCAGTGCTGGA 102476 29 100.0 32 ............................. GTGGAGCGCTTGGGCACACCCTGGTGGTGAAT 102537 29 100.0 32 ............................. GATTCAGAGCGATCAGAAAGCGATGTGCTGCG 102598 29 100.0 32 ............................. TGATGGCATGAAGGTAACGCTACACAATCCAC 102659 29 100.0 32 ............................. GTCTGGGACCACGCCGACTACATCCCGTTCTA 102720 29 100.0 32 ............................. CACCCCCGGCAAAAGCGGGGCAACGATCAGTG 102781 29 100.0 32 ............................. TGTTATGCCTGGCAGCCACCATGCCCAGTACA 102842 29 100.0 32 ............................. GGCACGCACGGCTGCCAACCAAAGGAGAGTTG 102903 29 100.0 32 ............................. CAGGAATCAACAGACTCACGGAGAAAAGCGCC 102964 29 100.0 32 ............................. GAGACCAATAATCCCAGTCAGCGACCTCACAA 103025 29 96.6 33 ..........T.................. CTGGTGGTGGCCGACCTGTCGAACATCGAGGGC 103087 29 100.0 32 ............................. TGCTCGGGCAGCTTGGTGGAGGGAAGGCTGAG 103148 29 100.0 32 ............................. CCGATGGCGGTGCCCACGATGGCCTCGATGAT 103209 29 100.0 32 ............................. CGGGAGGAATTCATCGGGTGGGTGCGTCATCA 103270 29 100.0 32 ............................. GTGTACCTGTGGCCTGACGCTGATTCGCAGCA 103331 29 86.2 0 ..A.........CA............T.. | ========== ====== ====== ====== ============================= ================================= ================== 64 29 99.7 32 GTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : TTGCTTGAGCGCATCATTCCCGACATCGAGGAAGTGCTTGCAGCAGGTGACATCAGCCCTCCCGCTCCGCACCCTGAAGCGGTGAGACCAGCGCTGCCAAATCCAGAAAGCATGGGTGATGCTGGTCATCGTGCTTGAGAACGCACCACCGCGTTTGCGTGGACGCCTCGCGGTTTGGCTGCTCGAAGTACGAGCGGGGGTGTACGTTGGCACTTATTCCCGAAAAGTGCGAGAGAACATCTGGGAGCAGGTTGTTGAGGGCATTGGTGACGGGAATGCGGTGATGGCTTGGCGAGCCAAGAATGAACTGGGGTTCGAGGTTCGTACCACTGGTGCGAACCGAAGGATTCCGGTCGAGTATGACGGCGTTCAGTTGGTGAGTTTCTTGCCTGAGGCTGAGCGCACGCCGCGCTGATCTTTAACAAACCGGAATGGCCTGCTGATTTGGTGGAAAATCAGAGGCCGAAATTTCTCATTGAAATCAATGGGATAGAGGAAGT # Right flank : GGCGTACCACTCGACCAACAGCGTGCGCGGGGAGATATCCGCAAATGCTTTCGATGGTAGCTGTGGCGCTCTGCTGCGCATCCCTTCGTTGGGTCAAGTGATCCCTTTGCATCTGAAGCGAAAACTTCAGCGAGCACTTCCTGTGAGTTTGGGCCTCAATGGCTGGTGGGTTGTCGGCAGCATTTCCTCCGGAGCGTGAGGCCGCCGAGCTGAAAGGCCCTGGTGAGCGAGGGGCTACCCCATCAGAGCCCTCAGGTTTGTGAATTGGCCCGCCGATAAAAACACACGTCCCCACCACGCCAGGGGAGCCGCTTGCCCCTCACAGAGCCTGGGCGCCCGCGGCAGGGTGCCAGGCTCTGACACAGCAGAGGTGGAGGCCATGGGAGCTTGGTGGTCACGTGCGCGTTTGCGCACCCGGGTGCAGGCAGGTTTTATGCTGGTGCTGGCCTTGGCGGCCGTGCAGGGCGCGATGGCATTTCTCGAGATGCGGCTGATCAATC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //