Array 1 13210-14433 **** Predicted by CRISPRDetect 2.4 *** >NZ_RKLY01000009.1 Companilactobacillus suantsaicola strain BCRC 81127 Scaffold9_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 13210 36 100.0 30 .................................... GCTCGTCTGCGTCCCCGTTAATCTTGAACT 13276 36 100.0 30 .................................... TAATTATGGAAGATAAAGGAAATGCGAACG 13342 36 100.0 30 .................................... TATTTATGGCTAAAGTATTCAAAGATGTGA 13408 36 100.0 30 .................................... GTGTCGCCTTGACGAATCTTCAAAGGTAAC 13474 36 100.0 30 .................................... CTAGTGCAGTTACGAATCCGACAATCATCA 13540 36 100.0 30 .................................... ATTATTGAACTAACTCAAGAATTAGCAAGT 13606 36 100.0 30 .................................... ATTTAAAGGTGTTCATTGACGTGGACAATA 13672 36 100.0 30 .................................... CTGTTAAATGGGATCTCGTAGATGAAATGC 13738 36 100.0 30 .................................... GACTTTTTATGAAACTGAATTAATGGAACA 13804 36 100.0 30 .................................... CTAATGCTATGGTGTACGCCGATACTTATC 13870 36 100.0 30 .................................... TTCCTAATTGCCCAGCAGCTTCCGCTACGT 13936 36 100.0 30 .................................... TTCCTAATTGCCCAGCAGCTTCCGCTACGT 14002 36 100.0 30 .................................... ATAAAGTCTACAGAAGCATGGAGCCCGAAA 14068 36 100.0 30 .................................... TTAGAAGCTATTTTGTACGGTTATGAGGTG 14134 36 100.0 30 .................................... CCATCGACAATCGACCTAGATACACTTAGA 14200 36 100.0 30 .................................... CCGTTGATAGTTATTCCTGCTTCACTATTA 14266 36 100.0 30 .................................... ACAATGTGAACGCTCAGAAGGCATTAGACA 14332 36 100.0 30 .................................... AAAACACAGTCAGAGAAAGCACACTAAATC 14398 36 97.2 0 ...................................A | ========== ====== ====== ====== ==================================== ============================== ================== 19 36 99.9 30 GTTTTTGTACCCTTAAAGATTTAGAAACAGTAAAAC # Left flank : TTAAACTTGATAATGATGGGCGTACGGTTTGGCTGATTCTTTACAATTTAGAAAGTTTTGTTTCTGCTGAGGAGATGTACAATTTTGTTTTGAAAGCAAAAAAGATGGTAGCAGAATCCGATATGAAATTAATGGTTATCGGCAACAGCTTAGAGAATATTCCAATCAATGAGCATGATGTCGAAAATATTGTAATTGCAGCCGACGAATTTCACCAAATGTTACCTTTTGAGAATTTGCTAGAAACCATAAAGTTACATTATCCATCTGATTTCTATTGGAGTCCTGAAGACACAGTAAATGCCATAAGGAGAATTGCTCCACTTGTTGGATCAAGTAAAAAAATGTTTATATCTAGTAAAGATTTGGTATTATTGAAAGTAGTAAATGAGGTTTTAGGTTACGAGACGTCGTTTAATTTAGAATGTAATTTACTCAATAGTACGGAAACCAAATTCTTGAAAGATTAATTAGGTATTTAGTTATTTTTTTAATTTGAG # Right flank : AAACCTCAAATTGAAATTGATTTGAGGTTTTTTGTGTACGATTTGCAATTAAATTCAAAAAAGGATTAATAAATCGGCCCAACTGTGTTAAAAATAATGGGAGGTGTAATTGATGGAAAATAGAACTACCATTTCGTACGTAATTTTAAAGTATGATAAAAGGACGGATGCTATCTACACAAAAGGGGTCAATAATGATCAAGGCAAATTTATGATTCCTAATTTGGAGCTGGATCCAACTAGAAATACAACGTCCACACAACTGAAGATGCATATTATTGAACGTTTGAAGGTTGTGGATGCTAATATTGACATTGATCATTTGTTTATTCCGTTTACTAACGTATCTTTTTCGCGTGACACAAAACTTTATAATTATTCTGTCATTATTTTTGAATCAGATAATGATGTTTTTGCGACAAACGAAAATGAGTCCTGGTATAAGTTGAGTTATGACAATATGAACTTTATGTGGAATTTAACTTGGTTTAGTGGCATGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACCCTTAAAGATTTAGAAACAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //